Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p55190 Brassica napus HOM05D006769 ORTHO05D008522 1.7e-224 782.3 384 100.0
BraA09t40927Z Brassica rapa HOM05D006769 ORTHO05D008522 8.3e-224 780.0 384 99.7
BolC8t51387H Brassica oleracea HOM05D006769 ORTHO05D008522 2.0e-214 748.8 397 94.5
BcaC07g40819 Brassica carinata HOM05D006769 ORTHO05D008522 3.5e-214 748.0 393 95.2
C08p38120 Brassica napus HOM05D006769 ORTHO05D008522 3.5e-214 748.0 393 95.2
BcaB08g35324 Brassica carinata HOM05D006769 ORTHO05D008522 1.2e-187 659.8 426 81.7
Sp6g10380 Schrenkiella parvula HOM05D006769 ORTHO05D008522 1.6e-158 563.1 498 64.5
AT2G26470 Arabidopsis thaliana HOM05D006769 ORTHO05D008522 2.3e-149 532.7 493 61.7
Thhalv10003450m.g Eutrema salsugineum HOM05D006769 ORTHO05D008522 5.7e-148 528.1 487 61.6
AL4G19290 Arabidopsis lyrata HOM05D006769 ORTHO05D008522 4.5e-145 518.5 499 59.5
CARHR294500 Cardamine hirsuta HOM05D006769 ORTHO05D008522 6.5e-144 514.6 473 61.3
Aa31LG5G9400 Aethionema arabicum HOM05D006769 ORTHO05D008522 3.1e-138 495.7 487 57.7
Carub.0004s0653 Capsella rubella HOM05D006769 ORTHO05D008522 2.2e-136 489.6 547 54.3
Carub.0004s0639 Capsella rubella HOM05D006769 ORTHO05D008522 1.6e-134 483.4 537 54.7
THA.LOC104819455 Tarenaya hassleriana HOM05D006769 ORTHO05D008522 1.4e-122 443.7 511 51.7
MD05G1163100 Malus domestica HOM05D006769 ORTHO05D008522 6.8e-109 398.3 390 55.1
Thecc.01G211800 Theobroma cacao HOM05D006769 ORTHO05D008522 2.8e-107 392.9 353 58.9
Prupe.8G191400 Prunus persica HOM05D006769 ORTHO05D008522 4.1e-106 389.0 389 53.0
FvH4_2g17880 Fragaria vesca HOM05D006769 ORTHO05D008522 9.2e-106 387.9 386 52.6
FAN15G1712 Fragaria x ananassa HOM05D006769 ORTHO05D008522 3.5e-105 386.0 386 51.8
FAN27G3257 Fragaria x ananassa HOM05D006769 ORTHO05D008522 4.5e-105 385.6 345 55.9
FAN24G2350 Fragaria x ananassa HOM05D006769 ORTHO05D008522 1.7e-104 383.6 386 52.3
Potri.002G250400 Populus trichocarpa HOM05D006769 ORTHO05D008522 5.0e-104 382.1 267 67.0
TWI18G0992 Tripterygium wilfordii HOM05D006769 ORTHO05D008522 5.0e-104 382.1 259 68.7
Duzib138G0404 Durio zibethinus HOM05D006769 ORTHO05D008522 1.1e-103 380.9 349 57.9
Ca_07395_v3 Cicer arietinum L. HOM05D006769 ORTHO05D008522 1.9e-103 380.2 388 52.8
RcHm_v2.0_Chr6g0283131 Rosa chinensis HOM05D006769 ORTHO05D008522 3.3e-103 379.4 258 68.6
Hma1.2p1_0161F.1_g071350 Hydrangea macrophylla HOM05D006769 ORTHO05D008522 4.3e-103 379.0 399 53.1
Phvul.008G137400 Phaseolus vulgaris HOM05D006769 ORTHO05D008522 5.6e-103 378.6 397 52.4
Medtr7g052250 Medicago truncatula HOM05D006769 ORTHO05D008522 6.1e-102 375.2 393 52.9
Sc05g0001770 Simmondsia chinensis HOM05D006769 ORTHO05D008522 6.1e-102 375.2 318 61.6
arahy.Tifrunner.gnm1.ann1.N7FX8W Arachis hypogaea HOM05D006769 ORTHO05D008522 8.0e-102 374.8 388 53.6
PSO170G1917 Papaver somniferum HOM05D006769 ORTHO05D008522 1.0e-101 374.4 347 54.5
Manes.12G053000 Manihot esculenta HOM05D006769 ORTHO05D008522 1.8e-101 373.6 393 53.2
QL09p046131 Quercus lobata HOM05D006769 ORTHO05D008522 1.8e-101 373.6 450 49.6
arahy.Tifrunner.gnm1.ann1.ADK8RR Arachis hypogaea HOM05D006769 ORTHO05D008522 2.3e-101 373.2 388 53.4
MSTRG.12754 Avicennia marina HOM05D006769 ORTHO05D008522 2.3e-101 373.2 275 65.1
Lalb_Chr03g0041161 Lupinus albus HOM05D006769 ORTHO05D008522 2.3e-101 373.2 388 54.1
CiPaw.13G054700 Carya illinoinensis HOM05D006769 ORTHO05D008522 5.2e-101 372.1 392 52.3
Glyma.08G344800 Glycine max HOM05D006769 ORTHO05D008522 5.2e-101 372.1 393 51.7
ECA248G0008 Erigeron canadensis HOM05D006769 ORTHO05D008522 1.2e-100 370.9 273 65.2
Psat3g151240 Pisum sativum HOM05D006769 ORTHO05D008522 1.2e-100 370.9 389 53.2
Lj1g0001413 Lotus japonicus HOM05D006769 ORTHO05D008522 1.5e-100 370.5 390 52.1
CAN.G188.2 Capsicum annuum HOM05D006769 ORTHO05D008522 3.4e-100 369.4 289 62.3
Cfa010337 Carpinus fangiana HOM05D006769 ORTHO05D008522 3.4e-100 369.4 286 63.3
Atru.chr6.1512 Acer truncatum HOM05D006769 ORTHO05D008522 4.4e-100 369.0 284 64.1
HanXRQChr01g0007211 Helianthus annuus HOM05D006769 ORTHO05D008522 4.4e-100 369.0 282 62.8
CANSAT01G2880 Cannabis sativa HOM05D006769 ORTHO05D008522 5.7e-100 368.6 254 68.1
Eucgr.K02091 Eucalyptus grandis HOM05D006769 ORTHO05D008522 5.7e-100 368.6 259 67.2
Gohir.D07G166800 Gossypium hirsutum HOM05D006769 ORTHO05D008522 1.3e-99 367.5 390 52.3
GSVIVG01006251001 Vitis vinifera HOM05D006769 ORTHO05D008522 1.7e-99 367.1 278 65.1
DCAR_004766 Daucus carota HOM05D006769 ORTHO05D008522 2.9e-99 366.3 346 53.8
AUR62028711 Chenopodium quinoa HOM05D006769 ORTHO05D008522 4.9e-99 365.5 383 52.7
SHI10304 Sapria himalayana HOM05D006769 ORTHO05D008522 8.3e-99 364.8 253 68.8
Migut.N00662 Erythranthe guttata HOM05D006769 ORTHO05D008522 1.8e-98 363.6 400 49.8
Nn1g08265 Nelumbo nucifera HOM05D006769 ORTHO05D008522 7.0e-98 361.7 390 51.5
Gorai.N003700 Gossypium raimondii HOM05D006769 ORTHO05D008522 1.2e-97 360.9 396 51.8
TPR.G26832 Trifolium pratense HOM05D006769 ORTHO05D008522 2.0e-97 360.1 313 60.1
CsaV3_7G026790 Cucumis sativus L. HOM05D006769 ORTHO05D008522 2.7e-97 359.8 323 55.4
Actinidia30020 Actinidia chinensis HOM05D006769 ORTHO05D008522 4.6e-97 359.0 303 60.4
Oeu003634.1 Olea europaea HOM05D006769 ORTHO05D008522 4.6e-97 359.0 335 56.1
PGR044G2601 Punica granatum HOM05D006769 ORTHO05D008522 4.6e-97 359.0 402 51.2
Cc01_g16210 Coffea canephora HOM05D006769 ORTHO05D008522 7.8e-97 358.2 284 61.3
ClCG09G008260 Citrullus lanatus HOM05D006769 ORTHO05D008522 1.3e-96 357.5 389 50.9
Aqoxy5G00037 Aquilegia oxysepala HOM05D006769 ORTHO05D008522 1.7e-96 357.1 396 50.0
AUR62008129 Chenopodium quinoa HOM05D006769 ORTHO05D008522 6.6e-96 355.1 383 50.9
Ah.11g051100 Amaranthus hybridus HOM05D006769 ORTHO05D008522 2.5e-95 353.2 372 52.7
Hund02792 Selenicereus undatus HOM05D006769 ORTHO05D008522 4.3e-95 352.4 376 51.6
Dinv12798 Davidia involucrata HOM05D006769 ORTHO05D008522 1.8e-93 347.1 418 48.1
ATR0609G088 Amborella trichopoda HOM05D006769 ORTHO05D008522 1.5e-92 344.0 295 59.0
unitig_37.g12548 Utricularia gibba HOM05D006769 ORTHO05D008522 3.4e-92 342.8 349 51.3
EL10Ac5g10636 Beta vulgaris HOM05D006769 ORTHO05D008522 4.4e-92 342.4 380 51.6
Lj2A1118G65 Lonicera japonica HOM05D006769 ORTHO05D008522 5.8e-92 342.0 388 49.2
SalBow3G4668 Salvia bowleyana HOM05D006769 ORTHO05D008522 1.4e-90 337.4 352 52.3
Nitab4.5_0008509g0020 Nicotiana tabacum HOM05D006769 ORTHO05D008522 4.1e-90 335.9 405 47.9
SEGI_34173 Sequoiadendron giganteum HOM05D006769 ORTHO05D008522 1.5e-87 327.4 391 46.8
Rhsim13G0052300 Rhododendron simsii HOM05D006769 ORTHO05D008522 5.2e-85 318.9 377 48.8
TAR365G1082 Trochodendron aralioides HOM05D006769 ORTHO05D008522 2.4e-82 310.1 388 45.1
AagrBONN_evm.TU.Sc2ySwM_344.907 Anthoceros agrestis HOM05D006769 ORTHO05D008522 1.6e-81 307.4 387 46.5
SMO241G0010 Selaginella moellendorffii HOM05D006769 ORTHO05D008522 3.3e-79 299.7 253 57.7
Lsat_1_v5_gn_5_178440 Lactuca sativa HOM05D006769 ORTHO05D008522 2.2e-75 287.0 259 52.5
HPP92_009961 Vanilla planifolia HOM05D006769 ORTHO05D008522 4.9e-75 285.8 258 57.0
vmacro21305 Vaccinium macrocarpon HOM05D006769 ORTHO05D008522 2.4e-74 283.5 410 43.2
HanXRQChr01g0007221 Helianthus annuus HOM05D006769 ORTHO05D008522 3.5e-73 279.6 335 46.0
Zm00001eb090430 Zea mays HOM05D006769 ORTHO05D008522 1.3e-72 277.7 251 56.6
Pp3c12_23250 Physcomitrium patens HOM05D006769 ORTHO05D008522 6.2e-70 268.9 273 48.7
VMungo1383G2812 Vigna mungo HOM05D006769 ORTHO05D008522 4.0e-69 266.2 307 51.5
CSS0037741 Camellia sinensis var. sinensis HOM05D006769 ORTHO05D008522 6.9e-69 265.4 172 70.3
Gohir.A07G159600 Gossypium hirsutum HOM05D006769 ORTHO05D008522 4.9e-67 259.2 305 50.5
Peaxi162Scf00335g01510 Petunia axillaris HOM05D006769 ORTHO05D008522 2.4e-66 256.9 182 67.0
Cpa.g.sc8.80 Carica papaya HOM05D006769 ORTHO05D008522 2.7e-65 253.4 199 65.3
CBR_g20401 Chara braunii HOM05D006769 ORTHO05D008522 1.5e-55 221.1 337 38.6
Sed0011761 Sechium edule HOM05D006769 ORTHO05D008522 4.3e-55 219.5 388 38.1
Hma1.2p1_0161F.1_g071340 Hydrangea macrophylla HOM05D006769 ORTHO05D008522 7.4e-55 218.8 292 48.3
Haze_03306 Corylus avellana HOM05D006769 ORTHO05D008522 1.6e-54 217.6 159 66.0
Mapoly0021s0139 Marchantia polymorpha HOM05D006769 ORTHO05D008522 1.8e-53 214.2 252 46.4
SEGI_18025 Sequoiadendron giganteum HOM05D006769 ORTHO05D008522 6.9e-53 212.2 152 65.8
Ciclev10032230m.g Citrus clementina HOM05D006769 ORTHO05D008522 3.8e-51 206.5 297 43.8
Nitab4.5_0000038g0100 Nicotiana tabacum HOM05D006769 ORTHO05D008522 1.8e-48 197.6 378 38.1
Os06g0470800 Oryza sativa ssp. japonica HOM05D006769 ORTHO05D008522 3.9e-48 196.4 178 57.3
MCO07G255 Micromonas commoda HOM05D006769 ORTHO05D008522 4.5e-44 183.0 242 41.7
CDE09G0834 Ceratophyllum demersum HOM05D006769 ORTHO05D008522 2.9e-43 180.3 342 37.1
Haze_03305 Corylus avellana HOM05D006769 ORTHO05D008522 6.0e-41 172.6 113 69.0
QL09p046008 Quercus lobata HOM05D006769 ORTHO05D008522 5.3e-37 159.5 91 80.2
PRCOL_00005345 Prasinoderma coloniale HOM05D006769 ORTHO05D008522 7.2e-34 149.1 316 34.5
RcHm_v2.0_Chr6g0283021 Rosa chinensis HOM05D006769 ORTHO05D008522 6.7e-32 142.5 123 57.7
Cfa021866 Carpinus fangiana HOM05D006769 ORTHO05D008522 6.3e-30 136.0 305 35.4
VMungo1383G3069 Vigna mungo HOM05D006769 ORTHO05D008522 1.4e-26 124.8 87 63.2
Cre09.g410000 Chlamydomonas reinhardtii HOM05D006769 ORTHO05D008522 2.5e-26 124.0 136 46.3
Cpa.g.sc8.79 Carica papaya HOM05D006769 ORTHO05D008522 3.2e-26 123.6 84 63.1
CDE02G1388 Ceratophyllum demersum HOM05D007934 ORTHO05D010067 6.5e-19 99.4 83 54.2
MD10G1152700 Malus domestica HOM05D006769 ORTHO05D008522 8.5e-19 99.0 147 40.8
SGA_v2.0_scaffold77G25292 Striga asiatica HOM05D006769 ORTHO05D008522 1.9e-18 97.8 244 32.4
CSS0014368 Camellia sinensis var. sinensis HOM05D006769 ORTHO05D008522 1.2e-17 95.1 248 34.3
Os06g0471100 Oryza sativa ssp. japonica HOM05D006769 ORTHO05D008522 4.4e-07 60.1 53 54.7
Prupe.6G190400 Prunus persica HOM05D006769 ORTHO05D008522 5.7e-07 59.7 47 51.1
Prupe.2G270900 Prunus persica HOM05D006769 ORTHO05D008522 3.7e-06 57.0 51 47.1


User provided reference genes

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