Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p54660 Brassica napus HOM05D002674 ORTHO05D008041 1.2e-47 193.0 105 100.0
BraA09t40877Z Brassica rapa HOM05D002674 ORTHO05D008041 2.9e-46 188.3 105 97.1
BcaC07g42733 Brassica carinata HOM05D002674 ORTHO05D008041 6.1e-44 180.6 107 93.5
Sp5g00710 Schrenkiella parvula HOM05D002674 ORTHO05D008041 2.0e-42 175.6 107 90.7
BcaC02g10314 Brassica carinata HOM05D002674 ORTHO05D008041 1.4e-40 169.5 107 87.9
A04p00510 Brassica napus HOM05D002674 ORTHO05D008041 1.4e-40 169.5 107 87.9
BolC4t24576H Brassica oleracea HOM05D002674 ORTHO05D008041 1.4e-40 169.5 107 87.9
BraA04t15771Z Brassica rapa HOM05D002674 ORTHO05D008041 1.4e-40 169.5 107 87.9
Thhalv10006327m.g Eutrema salsugineum HOM05D002674 ORTHO05D008041 2.4e-40 168.7 107 86.9
Carub.0005s2947 Capsella rubella HOM05D002674 ORTHO05D008041 3.1e-40 168.3 107 86.9
AL5G45590 Arabidopsis lyrata HOM05D002674 ORTHO05D008041 1.2e-39 166.4 107 87.9
AT3G62810 Arabidopsis thaliana HOM05D002674 ORTHO05D008041 5.9e-39 164.1 107 86.0
C04p30420 Brassica napus HOM05D002674 ORTHO05D008041 7.7e-39 163.7 107 86.0
BcaB02g08097 Brassica carinata HOM05D002674 ORTHO05D008041 1.0e-38 163.3 107 85.0
Aa31LG10G16570 Aethionema arabicum HOM05D002674 ORTHO05D008041 7.2e-37 157.1 107 80.4
CARHR173080 Cardamine hirsuta HOM05D002674 ORTHO05D008041 5.1e-35 151.0 107 78.5
TWI23G1311 Tripterygium wilfordii HOM05D002674 ORTHO05D008041 8.2e-33 143.7 107 77.6
Ciclev10022953m.g Citrus clementina HOM05D002674 ORTHO05D008041 2.4e-32 142.1 101 74.3
Manes.01G218700 Manihot esculenta HOM05D002674 ORTHO05D008041 3.1e-32 141.7 107 76.6
Thecc.01G300000 Theobroma cacao HOM05D002674 ORTHO05D008041 9.1e-32 140.2 102 73.5
COL.COLO4_23349 Corchorus olitorius HOM05D002674 ORTHO05D008041 1.6e-31 139.4 102 73.5
Cpa.g.sc9.264 Carica papaya HOM05D002674 ORTHO05D008041 2.0e-31 139.0 107 73.8
TWI14G1447 Tripterygium wilfordii HOM05D002674 ORTHO05D008041 2.6e-31 138.7 101 75.2
Gohir.D08G085400 Gossypium hirsutum HOM05D002674 ORTHO05D008041 4.5e-31 137.9 102 73.5
Gohir.A08G076000 Gossypium hirsutum HOM05D002674 ORTHO05D008041 5.9e-31 137.5 102 72.5
Oeu048338.1 Olea europaea HOM05D002674 ORTHO05D008041 5.9e-31 137.5 98 73.5
ECA247G1692 Erigeron canadensis HOM05D002674 ORTHO05D008041 7.7e-31 137.1 104 70.2
Atru.chr5.1150 Acer truncatum HOM05D002674 ORTHO05D008041 1.7e-30 136.0 102 71.6
Potri.014G129800 Populus trichocarpa HOM05D002674 ORTHO05D008041 1.7e-30 136.0 104 74.0
Atru.chr7.1564 Acer truncatum HOM05D002674 ORTHO05D008041 2.2e-30 135.6 107 71.0
Dinv19696 Davidia involucrata HOM05D002674 ORTHO05D008041 5.0e-30 134.4 104 73.1
Prupe.8G261100 Prunus persica HOM05D002674 ORTHO05D008041 6.5e-30 134.0 101 72.3
CiPaw.07G108500 Carya illinoinensis HOM05D002674 ORTHO05D008041 8.5e-30 133.7 103 68.9
Cc01_g20820 Coffea canephora HOM05D002674 ORTHO05D008041 1.1e-29 133.3 98 72.4
Duzib133G1209 Durio zibethinus HOM05D002674 ORTHO05D007700 1.1e-29 133.3 102 71.6
SGA_v2.0_scaffold2G01395 Striga asiatica HOM05D002674 ORTHO05D008041 1.5e-29 132.9 98 72.4
Sabra02G0154500 Salix brachista HOM05D002674 ORTHO05D008041 3.2e-29 131.7 104 71.2
SalBow3G0298 Salvia bowleyana HOM05D002674 ORTHO05D008041 4.2e-29 131.3 97 71.1
MD11G1310400 Malus domestica HOM05D002674 ORTHO05D008041 5.5e-29 131.0 105 66.7
RcHm_v2.0_Chr6g0293971 Rosa chinensis HOM05D002674 ORTHO05D008041 5.5e-29 131.0 102 70.6
MSTRG.21632 Avicennia marina HOM05D002674 ORTHO05D008041 9.4e-29 130.2 101 68.3
CsaV3_4G000790 Cucumis sativus L. HOM05D002674 ORTHO05D008041 9.4e-29 130.2 99 71.7
HanXRQChr15g0465661 Helianthus annuus HOM05D002674 ORTHO05D008041 1.2e-28 129.8 105 65.7
ClCG10G010910 Citrullus lanatus HOM05D002674 ORTHO05D008041 3.6e-28 128.3 99 69.7
Sed0019690 Sechium edule HOM05D002674 ORTHO05D008041 4.7e-28 127.9 102 66.7
TAR636G2182 Trochodendron aralioides HOM05D002674 ORTHO05D008041 4.7e-28 127.9 105 67.6
Actinidia32214 Actinidia chinensis HOM05D002674 ORTHO05D008041 6.1e-28 127.5 101 69.3
C08p37560 Brassica napus HOM05D002674 ORTHO05D008041 6.1e-28 127.5 72 91.7
MD03G1287900 Malus domestica HOM05D002674 ORTHO05D008041 6.1e-28 127.5 105 65.7
FvH4_2g25692 Fragaria vesca HOM05D002674 ORTHO05D008041 8.0e-28 127.1 101 69.3
Migut.D00216 Erythranthe guttata HOM05D002674 ORTHO05D008041 1.0e-27 126.7 101 66.3
Eucgr.H01115 Eucalyptus grandis HOM05D002674 ORTHO05D008041 1.0e-27 126.7 104 67.3
Dinv33053 Davidia involucrata HOM05D002674 ORTHO05D007700 1.4e-27 126.3 104 69.2
MELO3C017957.2 Cucumis melo HOM05D002674 ORTHO05D008041 3.0e-27 125.2 99 68.7
FvH4_3g17380 Fragaria vesca HOM05D002674 ORTHO05D008041 4.0e-27 124.8 97 70.1
FAN11G2206 Fragaria x ananassa HOM05D002674 ORTHO05D008041 4.0e-27 124.8 97 70.1
FAN21G2416 Fragaria x ananassa HOM05D002674 ORTHO05D008041 4.0e-27 124.8 97 70.1
GSVIVG01028011001 Vitis vinifera HOM05D002674 ORTHO05D008041 4.0e-27 124.8 100 69.0
MBI19_g25355_MAGBIO Magnolia biondii HOM05D002674 ORTHO05D008041 5.2e-27 124.4 96 72.9
Haze_04934 Corylus avellana HOM05D002674 ORTHO05D008041 6.7e-27 124.0 103 64.1
Hund18156 Selenicereus undatus HOM05D002674 ORTHO05D008041 8.8e-27 123.6 98 65.3
FAN16G1943 Fragaria x ananassa HOM05D002674 ORTHO05D008041 1.1e-26 123.2 97 69.1
FAN25G1445 Fragaria x ananassa HOM05D002674 ORTHO05D008041 1.1e-26 123.2 94 71.3
EL10Ac7g17468 Beta vulgaris HOM05D002674 ORTHO05D008041 1.5e-26 122.9 102 62.7
PGR044G1069 Punica granatum HOM05D002674 ORTHO05D008041 2.0e-26 122.5 98 68.4
QL12p028510 Quercus lobata HOM05D002674 ORTHO05D008041 2.0e-26 122.5 102 65.7
Cfa005915 Carpinus fangiana HOM05D002674 ORTHO05D008041 2.6e-26 122.1 103 63.1
AUR62033146 Chenopodium quinoa HOM05D002674 ORTHO05D008041 3.3e-26 121.7 102 62.7
CDE12G0521 Ceratophyllum demersum HOM05D002674 ORTHO05D008041 5.7e-26 120.9 97 69.1
CANSAT25G0502 Cannabis sativa HOM05D002674 ORTHO05D008041 1.3e-25 119.8 102 64.7
AUR62008625 Chenopodium quinoa HOM05D002674 ORTHO05D008041 1.3e-25 119.8 102 61.8
Nn3g21482 Nelumbo nucifera HOM05D002674 ORTHO05D008041 1.3e-25 119.8 99 67.7
PGR119G0614 Punica granatum HOM05D002674 ORTHO05D008041 1.7e-25 119.4 102 65.7
CSS0018179 Camellia sinensis var. sinensis HOM05D002674 ORTHO05D008041 2.2e-25 119.0 98 65.3
unitig_61.g26303 Utricularia gibba HOM05D002674 ORTHO05D008041 1.1e-24 116.7 98 63.3
Rhsim13G0010400 Rhododendron simsii HOM05D002674 ORTHO05D008041 4.1e-24 114.8 114 59.6
Nitab4.5_0008207g0030 Nicotiana tabacum HOM05D002674 ORTHO05D008041 9.1e-24 113.6 103 62.1
arahy.Tifrunner.gnm1.ann1.9NAT9F Arachis hypogaea HOM05D002674 ORTHO05D008041 1.2e-23 113.2 100 65.0
arahy.Tifrunner.gnm1.ann1.UV7MYU Arachis hypogaea HOM05D002674 ORTHO05D008041 1.2e-23 113.2 100 65.0
Nitab4.5_0001879g0010 Nicotiana tabacum HOM05D002674 ORTHO05D008041 2.0e-23 112.5 98 61.2
Lj5g0008305 Lotus japonicus HOM05D002674 ORTHO05D008041 3.5e-23 111.7 106 58.5
Psat6g166360 Pisum sativum HOM05D002674 ORTHO05D008041 3.5e-23 111.7 99 61.6
Sabra14G0096400 Salix brachista HOM05D002674 ORTHO05D008041 3.5e-23 111.7 95 64.2
Peaxi162Scf00001g00445 Petunia axillaris HOM05D002674 ORTHO05D008041 4.5e-23 111.3 98 60.2
Medtr1g088550 Medicago truncatula HOM05D002674 ORTHO05D008041 5.9e-23 110.9 103 58.3
PSO210G6076 Papaver somniferum HOM05D002674 ORTHO05D008041 5.9e-23 110.9 99 60.6
Aqoxy5G00753 Aquilegia oxysepala HOM05D002674 ORTHO05D008041 7.7e-23 110.5 97 63.9
CAN.G472.1 Capsicum annuum HOM05D002674 ORTHO05D008041 7.7e-23 110.5 98 60.2
Lalb_Chr21g0306851 Lupinus albus HOM05D002674 ORTHO05D008041 7.7e-23 110.5 100 62.0
PSO832G1306 Papaver somniferum HOM05D002674 ORTHO05D008041 7.7e-23 110.5 99 61.6
Solyc09g075100.3 Solanum lycopersicum HOM05D002674 ORTHO05D008041 1.3e-22 109.8 98 60.2
Sopen09g029920 Solanum pennellii HOM05D002674 ORTHO05D008041 1.3e-22 109.8 98 60.2
PGSC0003DMG400011376 Solanum tuberosum HOM05D002674 ORTHO05D008041 1.3e-22 109.8 104 59.6
Ca_10338_v3 Cicer arietinum L. HOM05D002674 ORTHO05D008041 1.7e-22 109.4 102 60.8
Duzib138G1033 Durio zibethinus HOM05D002674 ORTHO05D008041 1.7e-22 109.4 82 74.4
Phvul.007G146200 Phaseolus vulgaris HOM05D002674 ORTHO05D008041 2.2e-22 109.0 103 61.2
VMungo0720G1979 Vigna mungo HOM05D002674 ORTHO05D008041 2.2e-22 109.0 103 61.2
ATR0796G030 Amborella trichopoda HOM05D002674 ORTHO05D008041 3.8e-22 108.2 97 60.8
Gorai.004G089900 Gossypium raimondii HOM05D002674 ORTHO05D008041 3.8e-22 108.2 80 76.2
Glyma.10G018500 Glycine max HOM05D002674 ORTHO05D008041 3.2e-21 105.1 103 58.3
TPR.G34008 Trifolium pratense HOM05D002674 ORTHO05D008041 2.1e-20 102.4 103 56.3
Oeu010670.1 Olea europaea HOM05D002674 ORTHO05D008041 4.7e-20 101.3 101 57.4
Lsat_1_v5_gn_9_5640 Lactuca sativa HOM05D002674 ORTHO05D008643 6.1e-20 100.9 79 69.6
SalBow5G2922 Salvia bowleyana HOM05D002674 ORTHO05D008041 6.1e-20 100.9 77 71.4
SalBow3G1515 Salvia bowleyana HOM05D002674 ORTHO05D008041 1.0e-19 100.1 82 65.9
BcaC07g40760 Brassica carinata HOM05D002674 ORTHO05D008041 6.8e-19 97.4 70 70.0
BolC8t51336H Brassica oleracea HOM05D002674 ORTHO05D008041 6.8e-19 97.4 70 70.0
Sc24g0003780 Simmondsia chinensis HOM05D002674 ORTHO05D008041 8.8e-19 97.1 80 67.5
vmacro02452 Vaccinium macrocarpon HOM05D002674 ORTHO05D008041 8.8e-19 97.1 156 42.9
Haze_04957 Corylus avellana HOM05D002674 ORTHO05D008041 3.4e-18 95.1 80 66.2
CDE01G0164 Ceratophyllum demersum HOM05D002674 ORTHO05D008041 4.4e-18 94.7 83 66.3
SEGI_38702 Sequoiadendron giganteum HOM05D002674 ORTHO05D008041 7.5e-18 94.0 97 52.6
Ah.15g093210 Amaranthus hybridus HOM05D002674 ORTHO05D008041 1.7e-17 92.8 103 55.3
Os05g0363600 Oryza sativa ssp. japonica HOM05D002674 ORTHO05D008041 1.1e-16 90.1 98 54.1
Mapoly0061s0038 Marchantia polymorpha HOM05D002674 ORTHO05D008041 1.8e-16 89.4 91 51.6
Pp3c9_7930 Physcomitrium patens HOM05D002674 ORTHO05D008041 3.1e-16 88.6 91 53.8
Hma1.2p1_0491F.1_g164520 Hydrangea macrophylla HOM05D002674 ORTHO05D008041 5.4e-16 87.8 78 64.1
DCAR_002831 Daucus carota HOM05D000067 ORTHO05D001807 1.6e-15 86.3 76 67.1
Lalb_Chr02g0143261 Lupinus albus HOM05D000266 ORTHO05D008041 1.6e-15 86.3 81 59.3
Zm00001eb346590 Zea mays HOM05D002674 ORTHO05D008041 2.0e-15 85.9 98 52.0
AagrBONN_evm.TU.Sc2ySwM_362.373 Anthoceros agrestis HOM05D002674 ORTHO05D008041 3.8e-14 81.6 95 51.6
Glyma.02G018200 Glycine max HOM05D002674 ORTHO05D008041 6.5e-14 80.9 79 59.5
HPP92_013721 Vanilla planifolia HOM05D002674 ORTHO05D008041 4.2e-13 78.2 76 57.9
CBR_g24042 Chara braunii HOM05D002674 ORTHO05D008041 2.4e-08 62.4 74 48.6
RcHm_v2.0_Chr2g0146991 Rosa chinensis HOM05D002674 ORTHO05D008041 3.1e-08 62.0 54 66.7
MCO07G465 Micromonas commoda HOM05D002674 ORTHO05D008041 5.9e-07 57.8 78 43.6


User provided reference genes

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