Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p54410 Brassica napus HOM05D006941 ORTHO05D008361 3.7e-38 161.0 78 100.0
BraA09t40854Z Brassica rapa HOM05D006941 ORTHO05D008361 3.7e-38 161.0 78 100.0
BcaC07g42761 Brassica carinata HOM05D006941 ORTHO05D008361 2.5e-34 148.3 74 95.9
C08p37290 Brassica napus HOM05D006941 ORTHO05D008361 7.2e-34 146.7 74 94.6
BolC8t51307H Brassica oleracea HOM05D006941 ORTHO05D008361 7.2e-34 146.7 74 94.6
Sp5g00970 Schrenkiella parvula HOM05D006941 ORTHO05D008361 3.0e-32 141.4 74 89.2
Thhalv10006352m.g Eutrema salsugineum HOM05D006941 ORTHO05D008361 8.8e-32 139.8 74 87.8
Carub.0005s2918 Capsella rubella HOM05D006941 ORTHO05D008361 2.2e-30 135.2 74 85.1
AT3G62450 Arabidopsis thaliana HOM05D006941 ORTHO05D008361 3.7e-30 134.4 74 83.8
CARHR172790 Cardamine hirsuta HOM05D006941 ORTHO05D008361 4.8e-30 134.0 74 81.1
AL5G45260 Arabidopsis lyrata HOM05D006941 ORTHO05D008361 6.3e-30 133.7 74 83.8
THA.LOC104820449 Tarenaya hassleriana HOM05D006941 ORTHO05D008361 8.5e-27 123.2 71 80.3
BcaB02g07336 Brassica carinata HOM05D006941 ORTHO05D008361 2.5e-26 121.7 66 86.4
Aa31LG10G16360 Aethionema arabicum HOM05D006941 ORTHO05D008361 4.2e-26 120.9 64 87.5
TWI53G0190 Tripterygium wilfordii HOM05D006941 ORTHO05D008361 4.2e-26 120.9 70 80.0
TWI09G0325 Tripterygium wilfordii HOM05D006941 ORTHO05D008361 7.2e-26 120.2 70 80.0
Gohir.A02G045400 Gossypium hirsutum HOM05D006941 ORTHO05D008361 2.1e-25 118.6 69 79.7
Gohir.D02G051400 Gossypium hirsutum HOM05D006941 ORTHO05D008361 2.1e-25 118.6 69 79.7
Gorai.005G056700 Gossypium raimondii HOM05D006941 ORTHO05D008361 2.1e-25 118.6 69 79.7
HanXRQChr05g0154771 Helianthus annuus HOM05D006941 ORTHO05D008361 2.7e-25 118.2 68 80.9
Prupe.1G143700 Prunus persica HOM05D006941 ORTHO05D008361 2.7e-25 118.2 68 76.5
Duzib151G0434 Durio zibethinus HOM05D006941 ORTHO05D008361 3.6e-25 117.9 70 75.7
RcHm_v2.0_Chr4g0420661 Rosa chinensis HOM05D006941 ORTHO05D008361 4.7e-25 117.5 68 79.4
Eucgr.H03704 Eucalyptus grandis HOM05D006941 ORTHO05D008361 6.1e-25 117.1 68 79.4
Nitab4.5_0001624g0050 Nicotiana tabacum HOM05D006941 ORTHO05D008361 6.1e-25 117.1 68 79.4
FvH4_4g16990 Fragaria vesca HOM05D006941 ORTHO05D008361 8.0e-25 116.7 68 79.4
FAN07G2315 Fragaria x ananassa HOM05D006941 ORTHO05D008361 8.0e-25 116.7 68 79.4
FAN12G1403 Fragaria x ananassa HOM05D006941 ORTHO05D008361 8.0e-25 116.7 68 79.4
FAN12G3786 Fragaria x ananassa HOM05D006941 ORTHO05D008361 8.0e-25 116.7 68 79.4
DCAR_030574 Daucus carota HOM05D006941 ORTHO05D008361 1.0e-24 116.3 73 74.0
FAN17G2868 Fragaria x ananassa HOM05D006941 ORTHO05D008361 1.0e-24 116.3 68 77.9
CSS0029112 Camellia sinensis var. sinensis HOM05D006941 ORTHO05D008361 1.4e-24 115.9 68 75.0
CAN.G1327.4 Capsicum annuum HOM05D006941 ORTHO05D008361 1.4e-24 115.9 68 77.9
FAN22G2172 Fragaria x ananassa HOM05D006941 ORTHO05D008361 1.4e-24 115.9 68 79.4
Medtr1g068580 Medicago truncatula HOM05D006941 ORTHO05D008361 1.4e-24 115.9 72 72.2
Peaxi162Scf01067g00024 Petunia axillaris HOM05D006941 ORTHO05D008361 1.8e-24 115.5 69 76.8
Eucgr.H03682 Eucalyptus grandis HOM05D006941 ORTHO05D008361 3.0e-24 114.8 68 77.9
Lj5g0014316 Lotus japonicus HOM05D006941 ORTHO05D008361 3.0e-24 114.8 73 71.2
Oeu029280.1 Olea europaea HOM05D006941 ORTHO05D008361 3.0e-24 114.8 69 76.8
Solyc01g067820.3 Solanum lycopersicum HOM05D006941 ORTHO05D008361 3.0e-24 114.8 68 77.9
PGSC0003DMG400022846 Solanum tuberosum HOM05D006941 ORTHO05D008361 3.0e-24 114.8 68 77.9
Lalb_Chr14g0364951 Lupinus albus HOM05D006941 ORTHO05D008361 4.0e-24 114.4 68 79.4
Phvul.007G158300 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 4.0e-24 114.4 68 79.4
Thecc.04G275300 Theobroma cacao HOM05D006941 ORTHO05D008361 4.0e-24 114.4 68 75.0
Atru.chr4.2738 Acer truncatum HOM05D006941 ORTHO05D008361 5.2e-24 114.0 69 78.3
EL10As5g23584 Beta vulgaris HOM05D006941 ORTHO05D008361 8.8e-24 113.2 70 74.3
Ca_09608_v3 Cicer arietinum L. HOM05D006941 ORTHO05D008361 1.2e-23 112.8 65 78.5
Glyma.10G044600 Glycine max HOM05D006941 ORTHO05D008361 1.5e-23 112.5 68 76.5
Glyma.13G132200 Glycine max HOM05D006941 ORTHO05D008361 1.5e-23 112.5 68 76.5
Manes.03G190000 Manihot esculenta HOM05D006941 ORTHO05D008361 1.5e-23 112.5 68 75.0
Medtr2g005070 Medicago truncatula HOM05D006941 ORTHO05D008361 1.5e-23 112.5 69 73.9
Oeu010965.1 Olea europaea HOM05D006941 ORTHO05D008361 1.5e-23 112.5 69 75.4
Sopen01g029770 Solanum pennellii HOM05D006941 ORTHO05D008361 1.5e-23 112.5 68 75.0
CANSAT78G0092 Cannabis sativa HOM05D006941 ORTHO05D008361 2.0e-23 112.1 68 76.5
Lalb_Chr22g0358511 Lupinus albus HOM05D006941 ORTHO05D008361 2.0e-23 112.1 68 77.9
Psat6g067840 Pisum sativum HOM05D006941 ORTHO05D008361 2.0e-23 112.1 67 74.6
PGR004G2827 Punica granatum HOM05D006941 ORTHO05D008361 2.0e-23 112.1 69 73.9
CiPaw.02G087700 Carya illinoinensis HOM05D006941 ORTHO05D008361 2.6e-23 111.7 68 75.0
Manes.14G117300 Manihot esculenta HOM05D006941 ORTHO05D008361 3.4e-23 111.3 68 73.5
Actinidia32379 Actinidia chinensis HOM05D006941 ORTHO05D008361 1.7e-22 109.0 68 73.5
Phvul.010G109000 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 1.7e-22 109.0 68 73.5
Phvul.L002281 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 1.7e-22 109.0 68 73.5
QL06p006942 Quercus lobata HOM05D006941 ORTHO05D008361 1.7e-22 109.0 68 70.6
Rhsim02G0014500 Rhododendron simsii HOM05D006941 ORTHO05D008361 1.7e-22 109.0 68 73.5
ECA233G1626 Erigeron canadensis HOM05D006941 ORTHO05D008361 4.9e-22 107.5 69 71.0
Potri.005G071700 Populus trichocarpa HOM05D006941 ORTHO05D008361 4.9e-22 107.5 68 70.6
SalBow1G8344 Salvia bowleyana HOM05D006941 ORTHO05D008361 8.3e-22 106.7 73 65.8
Migut.G00223 Erythranthe guttata HOM05D006941 ORTHO05D008361 1.4e-21 105.9 67 74.6
Os11g0107450 Oryza sativa ssp. japonica HOM05D006941 ORTHO05D008361 5.4e-21 104.0 65 72.3
Sed0004518 Sechium edule HOM05D006941 ORTHO05D008361 9.1e-21 103.2 69 75.4
unitig_22.g6332 Utricularia gibba HOM05D006941 ORTHO05D008361 9.1e-21 103.2 71 67.6
arahy.Tifrunner.gnm1.ann1.UB09PE Arachis hypogaea HOM05D006941 ORTHO05D008361 2.0e-20 102.1 69 72.5
PSO302G0016 Papaver somniferum HOM05D006941 ORTHO05D008361 2.7e-20 101.7 70 67.1
vmacro15274 Vaccinium macrocarpon HOM05D006941 ORTHO05D008361 2.7e-20 101.7 72 68.1
arahy.Tifrunner.gnm1.ann1.DDI179 Arachis hypogaea HOM05D006941 ORTHO05D008361 4.5e-20 100.9 81 64.2
Sabra07G0080600 Salix brachista HOM05D006941 ORTHO05D008361 4.5e-20 100.9 80 60.0
BcaC07g40728 Brassica carinata HOM05D006941 ORTHO05D008361 5.9e-20 100.5 74 73.0
Os12g0106550 Oryza sativa ssp. japonica HOM05D006941 ORTHO05D008361 7.7e-20 100.1 63 73.0
Hund22020 Selenicereus undatus HOM05D006941 ORTHO05D008361 1.0e-19 99.8 70 68.6
ClCG06G005480 Citrullus lanatus HOM05D006941 ORTHO05D008361 1.9e-18 95.5 82 58.5
MD16G1176900 Malus domestica HOM05D006941 ORTHO05D008361 2.5e-18 95.1 49 89.8
SEGI_10041 Sequoiadendron giganteum HOM05D006941 ORTHO05D008361 3.3e-18 94.7 70 58.6
Zm00001eb163280 Zea mays HOM05D006941 ORTHO05D008361 3.3e-18 94.7 65 67.7
Lj4g0022805 Lotus japonicus HOM05D006941 ORTHO05D008361 4.2e-18 94.4 68 70.6
SHI00325 Sapria himalayana HOM05D006941 ORTHO05D008361 7.2e-18 93.6 68 67.6
Zm00001eb094170 Zea mays HOM05D006941 ORTHO05D008361 1.2e-17 92.8 65 66.2
SGA_v2.0_scaffold57G20266 Striga asiatica HOM05D006941 ORTHO05D008361 6.8e-16 87.0 92 51.1
Cfa015511 Carpinus fangiana HOM05D006941 ORTHO05D008361 1.2e-15 86.3 70 62.9
CDE02G1545 Ceratophyllum demersum HOM05D006941 ORTHO05D008361 1.2e-15 86.3 62 64.5
Haze_01039 Corylus avellana HOM05D006941 ORTHO05D008361 1.2e-15 86.3 68 64.7
PGSC0003DMG400029912 Solanum tuberosum HOM05D006941 ORTHO05D008361 1.5e-15 85.9 51 78.4
VMungo0464G0431 Vigna mungo HOM05D006941 ORTHO05D008361 1.5e-15 85.9 127 41.7
HanXRQChr15g0466771 Helianthus annuus HOM05D006941 ORTHO05D008361 2.6e-15 85.1 133 39.1
RcHm_v2.0_Chr1g0363231 Rosa chinensis HOM05D006941 ORTHO05D008361 4.1e-13 77.8 49 71.4
Eucgr.H03709 Eucalyptus grandis HOM05D006941 ORTHO05D008361 3.9e-11 71.2 39 84.6
Ciclev10006724m.g Citrus clementina HOM05D006941 ORTHO05D008361 2.5e-10 68.6 43 72.1
vmacro16859 Vaccinium macrocarpon HOM05D000537 ORTHO05D000415 2.5e-10 68.6 39 82.1
VMungo0720G2266 Vigna mungo HOM05D006941 ORTHO05D008361 9.5e-10 66.6 39 79.5
COL.COLO4_13955 Corchorus olitorius HOM05D006941 ORTHO05D008361 1.2e-09 66.2 35 85.7
Lsat_1_v5_gn_2_28060 Lactuca sativa HOM05D006941 ORTHO05D008361 1.2e-09 66.2 39 79.5
Medtr2g048470 Medicago truncatula HOM05D006941 ORTHO05D008361 1.2e-09 66.2 59 59.3
Sabra05G0058700 Salix brachista HOM05D006941 ORTHO05D008361 8.0e-09 63.5 164 28.7
Sc19g0004830 Simmondsia chinensis HOM05D006941 ORTHO05D008361 1.0e-08 63.2 39 74.4
Atru.chr2.2418 Acer truncatum HOM05D006941 ORTHO05D008361 2.3e-08 62.0 44 68.2
SGA_v2.0_scaffold114G31931 Striga asiatica HOM05D006941 ORTHO05D008361 4.0e-08 61.2 43 62.8
MSTRG.24772 Avicennia marina HOM05D006941 ORTHO05D008361 5.2e-08 60.8 38 73.7
Eucgr.H03675 Eucalyptus grandis HOM05D006941 ORTHO05D008361 5.2e-08 60.8 36 77.8
Dinv16400 Davidia involucrata HOM05D006941 ORTHO05D008361 4.4e-07 57.8 37 62.2
Eucgr.H03674 Eucalyptus grandis HOM05D025724 ORTHO05D008361 4.4e-07 57.8 35 80.0
Oeu048197.1 Olea europaea HOM05D010625 ORTHO05D008361 7.5e-07 57.0 39 66.7
Pp3c4_20400 Physcomitrium patens HOM05D006941 ORTHO05D008361 9.8e-07 56.6 64 50.0
Cpa.g.sc16.95 Carica papaya HOM05D006941 ORTHO05D008361 8.3e-06 53.5 31 71.0


User provided reference genes

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