Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p54230 Brassica napus HOM05D006141 ORTHO05D007670 9.6e-94 347.1 205 100.0
BraA09t40835Z Brassica rapa HOM05D006141 ORTHO05D007670 9.6e-94 347.1 205 100.0
C08p37090 Brassica napus HOM05D006141 ORTHO05D007670 1.6e-85 319.7 204 95.1
BolC8t51287H Brassica oleracea HOM05D006141 ORTHO05D007670 1.6e-85 319.7 204 95.1
BcaC07g40706 Brassica carinata HOM05D006141 ORTHO05D007670 1.5e-83 313.2 204 91.7
Sp5g01230 Schrenkiella parvula HOM05D006141 ORTHO05D007670 1.9e-70 269.6 216 78.7
AL5G44810 Arabidopsis lyrata HOM05D006141 ORTHO05D007670 1.6e-69 266.5 211 75.4
Thhalv10006233m.g Eutrema salsugineum HOM05D006141 ORTHO05D007670 3.7e-69 265.4 217 73.7
AT3G62140 Arabidopsis thaliana HOM05D006141 ORTHO05D007670 2.4e-68 262.7 211 73.5
A07p25870 Brassica napus HOM05D006141 ORTHO05D007670 4.5e-67 258.5 208 76.9
C06p28110 Brassica napus HOM05D006141 ORTHO05D007670 1.3e-66 256.9 203 73.9
BolC6t37977H Brassica oleracea HOM05D006141 ORTHO05D007670 1.3e-66 256.9 203 73.9
Carub.0005s2889 Capsella rubella HOM05D006141 ORTHO05D007670 6.5e-66 254.6 211 73.0
CARHR172480 Cardamine hirsuta HOM05D006141 ORTHO05D007670 6.0e-64 248.1 205 71.7
BcaB02g07358 Brassica carinata HOM05D002572 ORTHO05D002800 1.3e-63 246.9 190 75.8
Aa31LG10G16170 Aethionema arabicum HOM05D006141 ORTHO05D007670 3.1e-60 235.7 207 67.1
THA.LOC104817433 Tarenaya hassleriana HOM05D006141 ORTHO05D007670 5.1e-55 218.4 200 64.5
Gohir.A08G036900 Gossypium hirsutum HOM05D006141 ORTHO05D007670 6.9e-52 208.0 201 62.7
Gohir.D08G047500 Gossypium hirsutum HOM05D006141 ORTHO05D007670 9.1e-52 207.6 201 62.7
Atru.chr5.866 Acer truncatum HOM05D006141 ORTHO05D007670 7.7e-51 204.5 218 58.7
Gorai.004G046700 Gossypium raimondii HOM05D006141 ORTHO05D007670 7.7e-51 204.5 201 61.7
Nn4g25355 Nelumbo nucifera HOM05D006141 ORTHO05D007670 1.2e-48 197.2 202 59.9
BcaC08g45187 Brassica carinata HOM05D006141 ORTHO05D007670 7.9e-48 194.5 111 91.9
Manes.01G234600 Manihot esculenta HOM05D006141 ORTHO05D007670 1.4e-47 193.7 208 59.1
Glyma.03G224200 Glycine max HOM05D006141 ORTHO05D007670 3.0e-47 192.6 210 56.2
Potri.014G112900 Populus trichocarpa HOM05D006141 ORTHO05D007670 3.0e-47 192.6 206 59.2
Sabra14G0083000 Salix brachista HOM05D006141 ORTHO05D007670 3.0e-47 192.6 208 58.7
Duzib138G1179 Durio zibethinus HOM05D006141 ORTHO05D007670 1.1e-46 190.7 208 57.7
PGR042G1406 Punica granatum HOM05D006141 ORTHO05D007670 1.1e-46 190.7 212 57.1
Psat3g016880 Pisum sativum HOM05D006141 ORTHO05D007670 2.0e-46 189.9 216 56.5
TAR362G0148 Trochodendron aralioides HOM05D006141 ORTHO05D007670 2.0e-46 189.9 214 56.1
VMungo1383G2247 Vigna mungo HOM05D006141 ORTHO05D007670 3.3e-46 189.1 211 55.0
Ca_09244_v3 Cicer arietinum L. HOM05D006141 ORTHO05D007670 4.4e-46 188.7 216 55.1
TPR.G2465 Trifolium pratense HOM05D006141 ORTHO05D007670 4.4e-46 188.7 216 55.1
Cfa004908 Carpinus fangiana HOM05D006141 ORTHO05D007670 5.7e-46 188.3 219 55.7
Thecc.01G324800 Theobroma cacao HOM05D006141 ORTHO05D007670 5.7e-46 188.3 208 56.2
CANSAT25G1526 Cannabis sativa HOM05D006141 ORTHO05D007670 7.4e-46 188.0 209 55.5
QL12p034897 Quercus lobata HOM05D006141 ORTHO05D007670 9.7e-46 187.6 215 56.3
Glyma.19G221200 Glycine max HOM05D006141 ORTHO05D007670 1.3e-45 187.2 211 55.5
Ah.11g045950 Amaranthus hybridus HOM05D006141 ORTHO05D007670 1.7e-45 186.8 214 54.2
Ciclev10022224m.g Citrus clementina HOM05D006141 ORTHO05D007670 2.2e-45 186.4 215 55.8
Medtr7g110620 Medicago truncatula HOM05D006141 ORTHO05D007670 2.2e-45 186.4 216 55.1
Migut.D00015 Erythranthe guttata HOM05D006141 ORTHO05D007670 3.7e-45 185.7 202 56.4
Phvul.001G218100 Phaseolus vulgaris HOM05D006141 ORTHO05D007670 3.7e-45 185.7 211 54.5
CiPaw.08G082900 Carya illinoinensis HOM05D006141 ORTHO05D007670 4.8e-45 185.3 213 54.9
SGA_v2.0_scaffold417G51257 Striga asiatica HOM05D006141 ORTHO05D007670 4.8e-45 185.3 207 54.6
Prupe.3G003000 Prunus persica HOM05D006141 ORTHO05D007670 1.4e-44 183.7 208 55.8
Sopen01g030090 Solanum pennellii HOM05D006141 ORTHO05D007670 1.8e-44 183.3 224 53.1
HPP92_018284 Vanilla planifolia HOM05D006141 ORTHO05D007670 2.4e-44 183.0 199 55.8
Lalb_Chr18g0046401 Lupinus albus HOM05D006141 ORTHO05D007670 3.1e-44 182.6 210 55.2
TWI59G0338 Tripterygium wilfordii HOM05D006141 ORTHO05D007670 4.1e-44 182.2 216 54.2
HanXRQChr06g0167971 Helianthus annuus HOM05D006141 ORTHO05D007670 6.9e-44 181.4 199 57.3
COL.COLO4_23134 Corchorus olitorius HOM05D006141 ORTHO05D007670 1.5e-43 180.3 205 56.1
DCAR_012301 Daucus carota HOM05D006141 ORTHO05D007670 1.5e-43 180.3 210 55.2
MBI18_g10378_MAGBIO Magnolia biondii HOM05D006141 ORTHO05D007670 1.5e-43 180.3 200 55.5
Aqoxy2G02498 Aquilegia oxysepala HOM05D006141 ORTHO05D007670 2.0e-43 179.9 206 55.8
arahy.Tifrunner.gnm1.ann1.3ZI6V8 Arachis hypogaea HOM05D006141 ORTHO05D007670 3.4e-43 179.1 229 52.0
CDE09G0801 Ceratophyllum demersum HOM05D006141 ORTHO05D007670 3.4e-43 179.1 209 53.6
arahy.Tifrunner.gnm1.ann1.YFT3VK Arachis hypogaea HOM05D006141 ORTHO05D007670 4.5e-43 178.7 229 51.5
Nitab4.5_0000222g0340 Nicotiana tabacum HOM05D006141 ORTHO05D007670 4.5e-43 178.7 223 54.3
CsaV3_5G018600 Cucumis sativus L. HOM05D006141 ORTHO05D007670 5.9e-43 178.3 213 54.5
arahy.Tifrunner.gnm1.ann1.XETR8R Arachis hypogaea HOM05D006141 ORTHO05D007670 7.7e-43 177.9 229 52.0
MELO3C005194.2 Cucumis melo HOM05D006141 ORTHO05D007670 7.7e-43 177.9 213 54.5
RcHm_v2.0_Chr3g0485921 Rosa chinensis HOM05D006141 ORTHO05D007670 7.7e-43 177.9 205 55.1
ATR0796G189 Amborella trichopoda HOM05D006141 ORTHO05D007670 1.0e-42 177.6 204 55.4
MSTRG.21729 Avicennia marina HOM05D006141 ORTHO05D007670 1.0e-42 177.6 208 53.4
FAN23G3136 Fragaria x ananassa HOM05D006141 ORTHO05D007670 1.0e-42 177.6 207 55.1
Actinidia20966 Actinidia chinensis HOM05D006141 ORTHO05D007670 1.3e-42 177.2 215 53.0
FAN28G2755 Fragaria x ananassa HOM05D006141 ORTHO05D007670 1.7e-42 176.8 207 55.1
MD17G1284800 Malus domestica HOM05D006141 ORTHO05D007670 1.7e-42 176.8 214 51.9
FvH4_1g26260 Fragaria vesca HOM05D006141 ORTHO05D007670 2.9e-42 176.0 206 54.9
FAN19G0972 Fragaria x ananassa HOM05D006141 ORTHO05D007670 2.9e-42 176.0 206 54.9
Hma1.2p1_0408F.1_g146310 Hydrangea macrophylla HOM05D006141 ORTHO05D007670 2.9e-42 176.0 205 56.6
Sed0006054 Sechium edule HOM05D006141 ORTHO05D007670 3.8e-42 175.6 209 53.6
ClCG01G007160 Citrullus lanatus HOM05D006141 ORTHO05D007670 8.5e-42 174.5 211 54.5
Solyc01g068150.3 Solanum lycopersicum HOM05D006141 ORTHO05D007670 8.5e-42 174.5 213 52.6
Rhsim01G0000200 Rhododendron simsii HOM05D006141 ORTHO05D007670 1.1e-41 174.1 202 54.5
GSVIVG01028253001 Vitis vinifera HOM05D006141 ORTHO05D007670 1.9e-41 173.3 212 55.7
Cpa.g.sc57.10 Carica papaya HOM05D006141 ORTHO05D007670 7.2e-41 171.4 115 80.0
PSO761G0605 Papaver somniferum HOM05D006141 ORTHO05D007670 9.4e-41 171.0 212 53.3
SalBow6G5482 Salvia bowleyana HOM05D006141 ORTHO05D007670 2.7e-40 169.5 200 53.0
PSO210G0852 Papaver somniferum HOM05D006141 ORTHO05D007670 3.6e-40 169.1 212 52.8
ECA236G4451 Erigeron canadensis HOM05D006141 ORTHO05D007670 1.4e-39 167.2 203 53.7
Cc01_g21800 Coffea canephora HOM05D006141 ORTHO05D007670 2.3e-39 166.4 200 51.0
AUR62001013 Chenopodium quinoa HOM05D006141 ORTHO05D007670 6.7e-39 164.9 222 51.8
FAN26G1012 Fragaria x ananassa HOM05D006141 ORTHO05D007670 6.7e-39 164.9 228 50.0
CSS0000718 Camellia sinensis var. sinensis HOM05D006141 ORTHO05D007670 1.1e-38 164.1 173 57.8
Lsat_1_v5_gn_8_167241 Lactuca sativa HOM05D006141 ORTHO05D007670 1.1e-38 164.1 204 51.5
Dinv33165 Davidia involucrata HOM05D006141 ORTHO05D007670 1.5e-38 163.7 137 65.0
AUR62004945 Chenopodium quinoa HOM05D006141 ORTHO05D007670 3.3e-38 162.5 222 50.5
EL10Ac6g14128 Beta vulgaris HOM05D006141 ORTHO05D007670 1.3e-37 160.6 214 52.3
unitig_578.g16642 Utricularia gibba HOM05D006141 ORTHO05D007670 1.7e-37 160.2 200 51.0
BcaB02g07360 Brassica carinata HOM05D006141 ORTHO05D007670 3.7e-37 159.1 91 93.4
SEGI_07518 Sequoiadendron giganteum HOM05D006141 ORTHO05D007670 8.2e-37 157.9 210 48.1
Hma1.2p1_0408F.1_g146320 Hydrangea macrophylla HOM05D006141 ORTHO05D007670 1.1e-36 157.5 106 77.4
BraA07t30234Z Brassica rapa HOM05D006141 ORTHO05D007670 1.8e-36 156.8 88 94.3
Os01g0321800 Oryza sativa ssp. japonica HOM05D006141 ORTHO05D007670 1.8e-36 156.8 203 50.7
Zm00001eb340460 Zea mays HOM05D006141 ORTHO05D007670 5.9e-35 151.8 107 72.9
CAN.G100.55 Capsicum annuum HOM05D006141 ORTHO05D007670 6.5e-34 148.3 106 75.5
Peaxi162Scf00309g01021 Petunia axillaris HOM05D006141 ORTHO05D007670 5.5e-33 145.2 222 48.6
Rhsim01G0080900 Rhododendron simsii HOM05D006141 ORTHO05D007670 6.1e-32 141.7 151 54.3
Rhsim01G0085900 Rhododendron simsii HOM05D006141 ORTHO05D007670 6.3e-29 131.7 201 42.3
Lj2A1216T56 Lonicera japonica HOM05D006141 ORTHO05D007670 5.0e-26 122.1 73 84.9
Ciclev10030010m.g Citrus clementina HOM05D006141 ORTHO05D007670 1.0e-23 114.4 209 39.7
Ciclev10030249m.g Citrus clementina HOM05D006141 ORTHO05D007670 3.4e-22 109.4 181 43.1
Ciclev10030079m.g Citrus clementina HOM05D006141 ORTHO05D007670 4.4e-22 109.0 181 42.5
Pp3c2_35190 Physcomitrium patens HOM05D006141 ORTHO05D007670 3.7e-21 105.9 207 41.1
Mapoly0026s0067 Marchantia polymorpha HOM05D006141 ORTHO05D007670 9.1e-20 101.3 212 39.2
SHI33165 Sapria himalayana HOM05D006141 ORTHO05D007670 4.2e-17 92.4 126 46.0
Lj1g0014608 Lotus japonicus HOM05D006141 ORTHO05D007670 1.6e-16 90.5 207 38.2
Rhsim01G0086800 Rhododendron simsii HOM05D006141 ORTHO05D007670 3.6e-16 89.4 202 37.1
BcaC09g48717 Brassica carinata HOM05D001214 ORTHO05D001029 4.0e-15 85.9 45 95.6
CBR_g57079 Chara braunii HOM05D006141 ORTHO05D007670 5.4e-12 75.5 67 58.2
Rhsim01G0081900 Rhododendron simsii HOM05D006141 ORTHO05D007670 2.0e-11 73.6 53 67.9
FAN03G1225 Fragaria x ananassa HOM05D006141 ORTHO05D007670 2.7e-11 73.2 58 70.7
AagrBONN_evm.TU.Sc2ySwM_368.766 Anthoceros agrestis HOM05D006141 ORTHO05D007670 1.5e-09 67.4 158 34.8
Haze_05144 Corylus avellana HOM05D006141 ORTHO05D007670 7.3e-09 65.1 219 32.0
Rhsim01G0082900 Rhododendron simsii HOM05D006141 ORTHO05D007670 3.0e-07 59.7 149 32.2
DCAR_012300 Daucus carota HOM05D006141 ORTHO05D007670 1.5e-06 57.4 42 64.3
MCO02G477 Micromonas commoda HOM05D006141 ORTHO05D007670 5.7e-06 55.5 97 36.1


User provided reference genes

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