Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p51770 Brassica napus HOM05D006244 ORTHO05D007401 1.7e-157 559.3 280 100.0
C08p34500 Brassica napus HOM05D006244 ORTHO05D007401 7.8e-147 523.9 283 93.6
BolC8t51051H Brassica oleracea HOM05D006244 ORTHO05D007401 7.8e-147 523.9 283 93.6
BraA09t40612Z Brassica rapa HOM05D006244 ORTHO05D007401 8.9e-143 510.4 277 92.4
BcaC07g40479 Brassica carinata HOM05D006244 ORTHO05D007401 2.1e-139 499.2 289 88.9
BraA04t15944Z Brassica rapa HOM05D006244 ORTHO05D007401 3.0e-138 495.4 287 87.8
Sp5g03670 Schrenkiella parvula HOM05D006244 ORTHO05D007401 8.6e-138 493.8 294 86.7
A04p02170 Brassica napus HOM05D006244 ORTHO05D007401 1.4e-135 486.5 290 85.5
Carub.0005s2622 Capsella rubella HOM05D006244 ORTHO05D007401 1.5e-134 483.0 290 85.5
BcaC07g40478 Brassica carinata HOM05D006244 ORTHO05D007401 4.4e-134 481.5 289 85.8
BcaNung05942 Brassica carinata HOM05D006244 ORTHO05D007401 1.7e-133 479.6 278 88.8
BcaB02g08221 Brassica carinata HOM05D006244 ORTHO05D007401 3.8e-133 478.4 290 84.5
Thhalv10006132m.g Eutrema salsugineum HOM05D006244 ORTHO05D007401 3.8e-133 478.4 294 84.7
AT3G59490 Arabidopsis thaliana HOM05D006244 ORTHO05D007401 4.9e-133 478.0 294 84.0
CARHR169870 Cardamine hirsuta HOM05D006244 ORTHO05D007401 6.6e-130 467.6 294 82.3
AL5G41400 Arabidopsis lyrata HOM05D006244 ORTHO05D007401 2.5e-129 465.7 294 83.3
BolC4t24903H Brassica oleracea HOM05D006244 ORTHO05D007401 2.4e-119 432.6 280 80.7
Aa31LG10G13810 Aethionema arabicum HOM05D006244 ORTHO05D007401 2.6e-118 429.1 291 77.0
THA.LOC104803749 Tarenaya hassleriana HOM05D006244 ORTHO05D007401 2.1e-107 392.9 306 67.0
C04p33420 Brassica napus HOM05D006244 ORTHO05D007401 4.6e-99 365.2 290 70.7
TAR636G2962 Trochodendron aralioides HOM05D006244 ORTHO05D007401 1.1e-95 354.0 306 58.8
QL10p050150 Quercus lobata HOM05D006244 ORTHO05D007401 9.0e-95 350.9 305 59.7
QL05p011148 Quercus lobata HOM05D006244 ORTHO05D007401 2.0e-94 349.7 305 59.7
Cpa.g.sc9.298 Carica papaya HOM05D006244 ORTHO05D007401 3.4e-94 349.0 300 62.0
Atru.chr4.1240 Acer truncatum HOM05D006244 ORTHO05D007401 1.7e-93 346.7 293 61.1
Cfa020094 Carpinus fangiana HOM05D006244 ORTHO05D007401 2.1e-91 339.7 306 59.5
Dinv22748 Davidia involucrata HOM05D006244 ORTHO05D007401 2.7e-91 339.3 293 60.4
Actinidia11297 Actinidia chinensis HOM05D006244 ORTHO05D007401 1.0e-90 337.4 299 58.5
Hma1.2p1_0324F.1_g125510 Hydrangea macrophylla HOM05D006244 ORTHO05D007401 5.1e-90 335.1 287 61.3
Potri.017G028900 Populus trichocarpa HOM05D006244 ORTHO05D007401 5.1e-90 335.1 300 57.7
Duzib175G0007 Durio zibethinus HOM05D006244 ORTHO05D007401 2.5e-89 332.8 305 58.0
Manes.04G043800 Manihot esculenta HOM05D006244 ORTHO05D007401 4.3e-89 332.0 307 57.0
COL.COLO4_12977 Corchorus olitorius HOM05D006244 ORTHO05D007401 5.7e-89 331.6 329 54.4
Gorai.011G141500 Gossypium raimondii HOM05D006244 ORTHO05D007401 3.7e-88 328.9 305 57.0
Duzib151G0743 Durio zibethinus HOM05D006244 ORTHO05D007401 6.3e-88 328.2 305 57.4
CSS0032343 Camellia sinensis var. sinensis HOM05D006244 ORTHO05D007401 1.4e-87 327.0 306 54.9
CiPaw.02G053900 Carya illinoinensis HOM05D006244 ORTHO05D007401 1.4e-87 327.0 306 57.8
Ciclev10021382m.g Citrus clementina HOM05D006244 ORTHO05D007401 1.4e-87 327.0 299 57.2
Gohir.D10G128300 Gossypium hirsutum HOM05D006244 ORTHO05D007401 1.8e-87 326.6 305 56.7
FAN07G2433 Fragaria x ananassa HOM05D006244 ORTHO05D007401 5.3e-87 325.1 304 55.6
MELO3C009823.2 Cucumis melo HOM05D006244 ORTHO05D007401 2.0e-86 323.2 304 56.9
Hund03170 Selenicereus undatus HOM05D006244 ORTHO05D007401 2.6e-86 322.8 298 56.0
Gohir.A10G138500 Gossypium hirsutum HOM05D006244 ORTHO05D007401 3.4e-86 322.4 305 56.1
CANSAT78G1025 Cannabis sativa HOM05D006244 ORTHO05D007401 1.0e-85 320.9 305 54.8
Sabra17G0017500 Salix brachista HOM05D006244 ORTHO05D007401 1.0e-85 320.9 300 56.0
Aqoxy2G04144 Aquilegia oxysepala HOM05D006244 ORTHO05D007401 1.7e-85 320.1 286 55.2
CsaV3_3G040880 Cucumis sativus L. HOM05D006244 ORTHO05D007401 1.7e-85 320.1 304 56.2
FvH4_4g10850 Fragaria vesca HOM05D006244 ORTHO05D007401 1.7e-85 320.1 301 55.8
FAN12G2117 Fragaria x ananassa HOM05D006244 ORTHO05D007401 1.7e-85 320.1 301 55.8
Eucgr.H00368 Eucalyptus grandis HOM05D006244 ORTHO05D007401 3.8e-85 318.9 309 56.3
PSO732G0675 Papaver somniferum HOM05D006244 ORTHO05D007401 6.5e-85 318.2 299 54.5
HanXRQChr11g0343701 Helianthus annuus HOM05D006244 ORTHO05D007401 8.5e-85 317.8 293 56.3
RcHm_v2.0_Chr4g0406631 Rosa chinensis HOM05D006244 ORTHO05D007401 4.2e-84 315.5 304 54.3
Sc19g0002910 Simmondsia chinensis HOM05D006244 ORTHO05D007401 2.1e-83 313.2 306 51.6
ClCG10G015550 Citrullus lanatus HOM05D006244 ORTHO05D007401 3.6e-83 312.4 303 55.1
PSO675G8539 Papaver somniferum HOM05D006244 ORTHO05D007401 3.6e-83 312.4 312 53.2
Thecc.04G177000 Theobroma cacao HOM05D006244 ORTHO05D007401 3.6e-83 312.4 305 54.8
EL10Ac3g05981 Beta vulgaris HOM05D006244 ORTHO05D007401 6.1e-83 311.6 303 55.1
Lsat_1_v5_gn_1_77900 Lactuca sativa HOM05D006244 ORTHO05D007401 7.9e-83 311.2 278 57.2
Prupe.1G196900 Prunus persica HOM05D006244 ORTHO05D007401 7.9e-83 311.2 305 54.4
GSVIVG01010791001 Vitis vinifera HOM05D006244 ORTHO05D007401 1.0e-82 310.8 297 54.9
AUR62023861 Chenopodium quinoa HOM05D006244 ORTHO05D007401 3.0e-82 309.3 303 54.1
Lalb_Chr22g0352091 Lupinus albus HOM05D006244 ORTHO05D007401 6.7e-82 308.1 299 54.5
Lj3g0008901 Lotus japonicus HOM05D006244 ORTHO05D007401 4.4e-81 305.4 304 53.6
ECA248G0275 Erigeron canadensis HOM05D006244 ORTHO05D007401 9.7e-81 304.3 300 54.3
unitig_0.g2404 Utricularia gibba HOM05D006244 ORTHO05D007401 1.3e-80 303.9 288 52.4
MD04G1042500 Malus domestica HOM05D006244 ORTHO05D007401 3.7e-80 302.4 303 52.8
Psat5g289400 Pisum sativum HOM05D006244 ORTHO05D007401 4.8e-80 302.0 294 53.1
Rhsim09G0025200 Rhododendron simsii HOM05D006244 ORTHO05D007401 4.8e-80 302.0 363 46.0
Medtr2g098960 Medicago truncatula HOM05D006244 ORTHO05D007401 8.2e-80 301.2 294 53.1
SalBow3G2237 Salvia bowleyana HOM05D006244 ORTHO05D007401 2.4e-79 299.7 301 51.5
TPR.G18836 Trifolium pratense HOM05D006244 ORTHO05D007401 5.3e-79 298.5 294 53.1
Ah.07g202200 Amaranthus hybridus HOM05D006244 ORTHO05D007401 2.0e-78 296.6 302 51.0
PGR142G0422 Punica granatum HOM05D006244 ORTHO05D007401 2.0e-78 296.6 305 54.4
Peaxi162Scf00126g00623 Petunia axillaris HOM05D006244 ORTHO05D007401 2.6e-78 296.2 308 52.6
TWI38G0370 Tripterygium wilfordii HOM05D006244 ORTHO05D007401 3.5e-78 295.8 298 51.7
Nitab4.5_0008822g0040 Nicotiana tabacum HOM05D006244 ORTHO05D007401 5.9e-78 295.0 306 53.3
MSTRG.9759 Avicennia marina HOM05D006244 ORTHO05D007401 3.8e-77 292.4 302 50.3
Sopen11g020640 Solanum pennellii HOM05D006244 ORTHO05D007401 3.8e-77 292.4 307 52.1
AUR62002326 Chenopodium quinoa HOM05D006244 ORTHO05D007401 8.5e-77 291.2 303 53.1
Nitab4.5_0004117g0020 Nicotiana tabacum HOM05D006244 ORTHO05D007401 8.5e-77 291.2 306 52.6
Solyc11g045210.2 Solanum lycopersicum HOM05D006244 ORTHO05D007401 1.5e-76 290.4 307 52.1
PGSC0003DMG400022864 Solanum tuberosum HOM05D006244 ORTHO05D007401 4.2e-76 288.9 308 51.3
Glyma.15G029700 Glycine max HOM05D006244 ORTHO05D007401 5.5e-76 288.5 304 52.0
arahy.Tifrunner.gnm1.ann1.LPC3IP Arachis hypogaea HOM05D006244 ORTHO05D007401 2.1e-75 286.6 305 51.1
Cc07_g21300 Coffea canephora HOM05D006244 ORTHO05D007401 4.7e-75 285.4 299 51.2
Migut.G01000 Erythranthe guttata HOM05D006244 ORTHO05D007401 4.7e-75 285.4 292 51.0
CAN.G31.8 Capsicum annuum HOM05D006244 ORTHO05D007401 1.1e-73 280.8 308 51.3
MBI08_g33169_MAGBIO Magnolia biondii HOM05D006244 ORTHO05D007401 3.3e-73 279.3 277 53.8
ATR0743G009 Amborella trichopoda HOM05D006244 ORTHO05D007401 7.7e-70 268.1 298 47.3
arahy.Tifrunner.gnm1.ann1.IE55HN Arachis hypogaea HOM05D006244 ORTHO05D007401 7.7e-70 268.1 294 49.7
HPP92_001264 Vanilla planifolia HOM05D006244 ORTHO05D007401 1.5e-68 263.8 313 45.0
HPP92_001248 Vanilla planifolia HOM05D006244 ORTHO05D007401 2.5e-68 263.1 313 45.0
Nn3g18564 Nelumbo nucifera HOM05D006244 ORTHO05D007401 6.1e-67 258.5 302 46.4
VMungo1080G0762 Vigna mungo HOM05D006244 ORTHO05D007401 3.0e-58 229.6 261 48.3
Actinidia27645 Actinidia chinensis HOM05D006244 ORTHO05D007401 2.0e-57 226.9 207 58.0
C04p32460 Brassica napus HOM05D006244 ORTHO05D007401 5.7e-57 225.3 192 64.6
Sed0026513 Sechium edule HOM05D006244 ORTHO05D007401 1.4e-55 220.7 234 53.8
DCAR_028445 Daucus carota HOM05D006244 ORTHO05D007401 4.1e-55 219.2 262 44.3
Phvul.005G153400 Phaseolus vulgaris HOM05D006244 ORTHO05D007401 1.0e-53 214.5 307 41.7
Lju337A6T20 Lonicera japonica HOM05D006244 ORTHO05D007401 2.6e-49 199.9 264 44.7
vmacro00644 Vaccinium macrocarpon HOM05D006244 ORTHO05D007401 8.3e-48 194.9 201 51.2
FAN17G1708 Fragaria x ananassa HOM05D006244 ORTHO05D007401 1.4e-47 194.1 199 51.3
Zm00001eb318410 Zea mays HOM05D006244 ORTHO05D007401 4.1e-39 166.0 233 40.3
Cfa015178 Carpinus fangiana HOM05D006244 ORTHO05D007401 4.6e-38 162.5 170 55.9
MBI08_g09972_MAGBIO Magnolia biondii HOM05D006244 ORTHO05D007401 1.1e-36 157.9 193 47.2
vmacro00645 Vaccinium macrocarpon HOM05D006244 ORTHO05D007401 2.2e-32 143.7 105 62.9
BcaC02g10138 Brassica carinata HOM05D006244 ORTHO05D007401 4.1e-31 139.4 235 43.8
Pp3c9_3600 Physcomitrium patens HOM05D006244 ORTHO05D007401 1.1e-26 124.8 304 29.3
Psat5g289440 Pisum sativum HOM05D006244 ORTHO05D007401 1.1e-26 124.8 125 52.0
SMO364G0376 Selaginella moellendorffii HOM05D006244 ORTHO05D007401 5.1e-21 105.9 259 30.1
Os09g0515300 Oryza sativa ssp. japonica HOM05D006244 ORTHO05D007401 1.5e-20 104.4 115 47.8
Lj6A77G23 Lonicera japonica HOM05D006244 ORTHO05D007401 2.1e-19 100.5 94 54.3
Sabra17G0062000 Salix brachista HOM05D006244 ORTHO05D007401 6.2e-19 99.0 120 47.5
Lj6C77T3 Lonicera japonica HOM05D006244 ORTHO05D007401 2.6e-17 93.6 66 65.2
Lju337A6G22 Lonicera japonica HOM05D006244 ORTHO05D007401 9.9e-17 91.7 65 63.1
Peaxi162Scf01193g00009 Petunia axillaris HOM05D006244 ORTHO05D007401 4.9e-16 89.4 127 43.3
Peaxi162Scf00533g00611 Petunia axillaris HOM05D006244 ORTHO05D007401 8.4e-16 88.6 127 41.7
Peaxi162Scf00066g02019 Petunia axillaris HOM05D006244 ORTHO05D007401 2.4e-15 87.0 127 42.5
Glyma.13G344600 Glycine max HOM05D006244 ORTHO05D007401 5.4e-15 85.9 66 57.6
Zm00001eb239190 Zea mays HOM05D001072 ORTHO05D007401 7.8e-14 82.0 65 53.8
Peaxi162Scf00272g00041 Petunia axillaris HOM05D006244 ORTHO05D007401 3.0e-13 80.1 120 40.8
Peaxi162Scf00627g00001 Petunia axillaris HOM05D006244 ORTHO05D007401 3.3e-12 76.6 120 40.0
Peaxi162Scf00404g00815 Petunia axillaris HOM05D006244 ORTHO05D007401 2.4e-10 70.5 130 39.2
AagrBONN_evm.TU.Sc2ySwM_228.3866 Anthoceros agrestis HOM05D006244 ORTHO05D007401 9.9e-09 65.1 136 34.6


User provided reference genes

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