Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p50910 Brassica napus HOM05D004561 ORTHO05D005315 4.1e-136 488.0 241 100.0
BcaC07g40276 Brassica carinata HOM05D004561 ORTHO05D005315 1.1e-104 383.6 247 81.0
C08p33660 Brassica napus HOM05D004561 ORTHO05D005315 5.8e-90 334.7 226 78.3
CARHR168490 Cardamine hirsuta HOM05D004561 ORTHO05D005315 1.4e-83 313.5 227 71.4
BolC8t50963H Brassica oleracea HOM05D004561 ORTHO05D005315 9.9e-82 307.4 205 79.0
BcaB02g07548 Brassica carinata HOM05D004561 ORTHO05D005315 3.7e-81 305.4 228 68.9
AT3G58130 Arabidopsis thaliana HOM05D004561 ORTHO05D005315 4.9e-81 305.1 246 65.9
BraA07t30043Z Brassica rapa HOM05D004561 ORTHO05D005315 4.9e-81 305.1 228 68.9
Sp5g04590 Schrenkiella parvula HOM05D004561 ORTHO05D005315 6.4e-81 304.7 221 71.5
AL5G39820 Arabidopsis lyrata HOM05D004561 ORTHO05D005315 3.2e-80 302.4 225 69.3
A07p23920 Brassica napus HOM05D004561 ORTHO05D005315 5.4e-80 301.6 246 65.0
Thhalv10002077m.g Eutrema salsugineum HOM05D004561 ORTHO05D005315 4.6e-79 298.5 232 69.0
BcaC08g44900 Brassica carinata HOM05D004561 ORTHO05D005315 1.7e-78 296.6 216 70.4
AT2G27340 Arabidopsis thaliana HOM05D004561 ORTHO05D005315 2.3e-78 296.2 218 70.2
Carub.0005s2498 Capsella rubella HOM05D004561 ORTHO05D005315 3.0e-78 295.8 222 68.0
BolC6t37673H Brassica oleracea HOM05D004561 ORTHO05D005315 1.5e-77 293.5 246 63.4
Thhalv10002036m.g Eutrema salsugineum HOM05D004561 ORTHO05D005315 9.6e-77 290.8 228 69.3
C06p25150 Brassica napus HOM05D004561 ORTHO05D005315 4.4e-74 282.0 260 60.8
Aa31LG10G12840 Aethionema arabicum HOM05D004561 ORTHO05D005315 6.2e-68 261.5 264 54.2
THA.LOC104822320 Tarenaya hassleriana HOM05D004561 ORTHO05D005315 6.4e-65 251.5 226 61.9
Hma1.2p1_0018F.1_g012650 Hydrangea macrophylla HOM05D004561 ORTHO05D005315 1.5e-61 240.4 223 56.1
GSVIVG01028605001 Vitis vinifera HOM05D004561 ORTHO05D005315 1.5e-61 240.4 224 57.1
CSS0045511 Camellia sinensis var. sinensis HOM05D004561 ORTHO05D005315 2.5e-61 239.6 225 56.0
CiPaw.15G149700 Carya illinoinensis HOM05D004561 ORTHO05D005315 7.4e-61 238.0 224 55.4
Dinv14864 Davidia involucrata HOM05D004561 ORTHO05D005315 9.6e-61 237.7 245 51.8
MD16G1270300 Malus domestica HOM05D004561 ORTHO05D005315 1.6e-60 236.9 223 54.3
COL.COLO4_13996 Corchorus olitorius HOM05D004561 ORTHO05D005315 2.1e-60 236.5 224 56.7
Gohir.A05G386400 Gossypium hirsutum HOM05D004561 ORTHO05D005315 2.4e-59 233.0 224 54.9
QL09p040874 Quercus lobata HOM05D004561 ORTHO05D005315 4.0e-59 232.3 225 54.2
Lsat_1_v5_gn_7_30581 Lactuca sativa HOM05D004561 ORTHO05D005315 6.9e-59 231.5 217 55.8
Thecc.01G124300 Theobroma cacao HOM05D004561 ORTHO05D005315 6.9e-59 231.5 223 55.2
Eucgr.B03172 Eucalyptus grandis HOM05D004561 ORTHO05D005315 3.4e-58 229.2 224 53.6
Sc18g0002470 Simmondsia chinensis HOM05D004561 ORTHO05D005315 4.5e-58 228.8 226 53.1
Atru.chr13.142 Acer truncatum HOM05D004561 ORTHO05D005315 7.6e-58 228.0 224 53.1
Hund26218 Selenicereus undatus HOM05D004561 ORTHO05D005315 7.6e-58 228.0 225 51.1
MELO3C017214.2 Cucumis melo HOM05D004561 ORTHO05D005315 9.9e-58 227.6 222 55.0
Gorai.012G033300 Gossypium raimondii HOM05D004561 ORTHO05D005315 1.7e-57 226.9 224 54.0
Prupe.5G069900 Prunus persica HOM05D004561 ORTHO05D005315 1.7e-57 226.9 223 52.9
Potri.012G041700 Populus trichocarpa HOM05D004561 ORTHO05D005315 2.9e-57 226.1 219 53.0
Ciclev10002226m.g Citrus clementina HOM05D004561 ORTHO05D005315 3.8e-57 225.7 222 53.6
Manes.08G062966 Manihot esculenta HOM05D004561 ORTHO05D005315 3.8e-57 225.7 224 51.8
Gohir.D04G023500 Gossypium hirsutum HOM05D004561 ORTHO05D005315 4.9e-57 225.3 224 54.0
TAR628G1415 Trochodendron aralioides HOM05D004561 ORTHO05D005315 4.9e-57 225.3 233 51.1
CsaV3_1G002780 Cucumis sativus L. HOM05D004561 ORTHO05D005315 1.1e-56 224.2 222 54.5
Sed0015683 Sechium edule HOM05D004561 ORTHO05D005315 3.2e-56 222.6 240 49.6
HanXRQChr15g0480201 Helianthus annuus HOM05D004561 ORTHO05D005315 4.2e-56 222.2 226 50.0
Sabra12G0028700 Salix brachista HOM05D004561 ORTHO05D005315 4.2e-56 222.2 219 52.5
Cc03_g07430 Coffea canephora HOM05D004561 ORTHO05D005315 7.1e-56 221.5 221 54.8
ECA233G0879 Erigeron canadensis HOM05D004561 ORTHO05D005315 7.1e-56 221.5 218 52.3
Solyc08g074360.3 Solanum lycopersicum HOM05D004561 ORTHO05D005315 1.6e-55 220.3 228 51.3
TWI15G0666 Tripterygium wilfordii HOM05D004561 ORTHO05D005315 1.6e-55 220.3 224 52.7
TWI81G0190 Tripterygium wilfordii HOM05D004561 ORTHO05D005315 2.1e-55 219.9 219 53.9
Lj1A1185G61 Lonicera japonica HOM05D004561 ORTHO05D005315 4.6e-55 218.8 257 46.3
FAN13G2292 Fragaria x ananassa HOM05D004561 ORTHO05D005315 6.0e-55 218.4 209 53.6
FAN18G3337 Fragaria x ananassa HOM05D004561 ORTHO05D005315 6.0e-55 218.4 209 53.6
Sopen08g023020 Solanum pennellii HOM05D004561 ORTHO05D005315 6.0e-55 218.4 228 51.8
FvH4_7g18930 Fragaria vesca HOM05D004561 ORTHO05D005315 1.0e-54 217.6 208 54.3
FAN06G3856 Fragaria x ananassa HOM05D004561 ORTHO05D005315 1.0e-54 217.6 208 54.3
PGSC0003DMG400009224 Solanum tuberosum HOM05D004561 ORTHO05D005315 1.0e-54 217.6 219 52.5
FAN08G3218 Fragaria x ananassa HOM05D004561 ORTHO05D005315 1.3e-54 217.2 215 52.6
MSTRG.11225 Avicennia marina HOM05D004561 ORTHO05D005315 1.8e-54 216.9 227 48.5
Lalb_Chr12g0208781 Lupinus albus HOM05D004561 ORTHO05D005315 2.3e-54 216.5 218 51.8
Peaxi162Scf00152g00158 Petunia axillaris HOM05D004561 ORTHO05D005315 3.0e-54 216.1 221 53.8
CAN.G370.25 Capsicum annuum HOM05D004561 ORTHO05D005315 3.9e-54 215.7 218 51.8
VMungo0251G0557 Vigna mungo HOM05D004561 ORTHO05D005315 3.9e-54 215.7 218 53.2
Glyma.05G126500 Glycine max HOM05D004561 ORTHO05D005315 6.7e-54 214.9 235 49.8
Lj4g0004659 Lotus japonicus HOM05D004561 ORTHO05D005315 6.7e-54 214.9 241 46.5
CDE04G2633 Ceratophyllum demersum HOM05D004561 ORTHO05D005315 1.1e-53 214.2 243 45.7
Medtr4g094538 Medicago truncatula HOM05D004561 ORTHO05D005315 1.5e-53 213.8 248 46.8
Glyma.08G081300 Glycine max HOM05D004561 ORTHO05D005315 1.9e-53 213.4 224 50.9
Solyc11g017400.2 Solanum lycopersicum HOM05D004561 ORTHO05D005315 1.9e-53 213.4 219 52.1
Psat1g047920 Pisum sativum HOM05D004561 ORTHO05D005315 4.3e-53 212.2 224 51.8
FAN06G2746 Fragaria x ananassa HOM05D004561 ORTHO05D005315 5.6e-53 211.8 201 55.2
Aqoxy6G01699 Aquilegia oxysepala HOM05D004561 ORTHO05D005315 9.6e-53 211.1 236 46.6
FvH4_5g18940 Fragaria vesca HOM05D004561 ORTHO05D005315 1.3e-52 210.7 217 50.2
PSO210G6857 Papaver somniferum HOM05D004561 ORTHO05D005315 1.3e-52 210.7 226 48.7
TPR.G30372 Trifolium pratense HOM05D004561 ORTHO05D005315 1.3e-52 210.7 248 47.6
MSTRG.22847 Avicennia marina HOM05D004561 ORTHO05D005315 2.8e-52 209.5 223 48.9
Nn5g27375 Nelumbo nucifera HOM05D004561 ORTHO05D005315 2.8e-52 209.5 227 48.5
Carub.0339s0001 Capsella rubella HOM05D004561 ORTHO05D005315 3.7e-52 209.1 142 75.4
FAN04G2378 Fragaria x ananassa HOM05D004561 ORTHO05D005315 4.8e-52 208.8 206 52.9
SalBow3G1851 Salvia bowleyana HOM05D004561 ORTHO05D005315 1.4e-51 207.2 237 47.7
Migut.I00621 Erythranthe guttata HOM05D004561 ORTHO05D005315 2.4e-51 206.5 215 50.2
BcaC07g40185 Brassica carinata HOM05D004561 ORTHO05D005315 4.0e-51 205.7 221 53.8
RcHm_v2.0_Chr7g0203331 Rosa chinensis HOM05D004561 ORTHO05D005315 4.0e-51 205.7 219 50.2
Oeu031248.3 Olea europaea HOM05D004561 ORTHO05D005315 1.7e-49 200.3 288 44.1
Zm00001eb433850 Zea mays HOM05D004561 ORTHO05D005315 2.9e-49 199.5 221 47.5
Nitab4.5_0000422g0080 Nicotiana tabacum HOM05D004561 ORTHO05D005315 1.4e-48 197.2 204 51.5
ClCG06G015750 Citrullus lanatus HOM05D000113 ORTHO05D002571 7.1e-48 194.9 203 51.7
PGSC0003DMG403029595 Solanum tuberosum HOM05D004561 ORTHO05D005315 1.2e-47 194.1 204 50.5
AUR62021469 Chenopodium quinoa HOM05D004561 ORTHO05D005315 4.6e-47 192.2 213 47.9
ATR0661G441 Amborella trichopoda HOM05D004561 ORTHO05D005315 6.0e-47 191.8 248 43.5
Os04g0678800 Oryza sativa ssp. japonica HOM05D004561 ORTHO05D005315 1.3e-46 190.7 225 45.3
Phvul.002G198500 Phaseolus vulgaris HOM05D004561 ORTHO05D005315 2.3e-46 189.9 209 50.2
vmacro18667 Vaccinium macrocarpon HOM05D004561 ORTHO05D005315 1.5e-45 187.2 279 39.8
arahy.Tifrunner.gnm1.ann1.AX2CN5 Arachis hypogaea HOM05D004561 ORTHO05D005315 3.3e-45 186.0 220 47.3
AUR62010959 Chenopodium quinoa HOM05D004561 ORTHO05D005315 4.3e-45 185.7 203 47.8
Rhsim06G0237000 Rhododendron simsii HOM05D004561 ORTHO05D005315 4.3e-45 185.7 218 46.8
RcHm_v2.0_Chr7g0203411 Rosa chinensis HOM05D004561 ORTHO05D005315 1.3e-44 184.1 219 43.8
unitig_744.g24647 Utricularia gibba HOM05D004561 ORTHO05D005315 1.6e-44 183.7 230 44.3
SalBow1G5912 Salvia bowleyana HOM05D004561 ORTHO05D005315 2.8e-44 183.0 204 50.5
SHI05351 Sapria himalayana HOM05D004561 ORTHO05D005315 6.3e-44 181.8 228 43.9
Peaxi162Scf00310g00711 Petunia axillaris HOM05D004561 ORTHO05D005315 1.1e-43 181.0 214 50.0
AUR62007426 Chenopodium quinoa HOM05D004561 ORTHO05D005315 1.4e-43 180.6 203 46.3
SGA_v2.0_scaffold37G14646 Striga asiatica HOM05D004561 ORTHO05D005315 9.0e-43 177.9 196 48.5
DCAR_002722 Daucus carota HOM05D004561 ORTHO05D005315 7.6e-42 174.9 184 52.2
EL10Ac8g18446 Beta vulgaris HOM05D004561 ORTHO05D005315 1.7e-41 173.7 213 42.7
Sopen11g009350 Solanum pennellii HOM05D004561 ORTHO05D005315 1.8e-38 163.7 165 51.5
Lj6g0005186 Lotus japonicus HOM05D004561 ORTHO05D005315 4.1e-35 152.5 189 42.9
AagrBONN_evm.TU.Sc2ySwM_368.3407 Anthoceros agrestis HOM05D004561 ORTHO05D005315 4.5e-34 149.1 227 38.8
FAN18G2677 Fragaria x ananassa HOM05D004561 ORTHO05D005315 1.3e-33 147.5 160 48.8
ECA236G3170 Erigeron canadensis HOM05D004561 ORTHO05D005315 6.5e-33 145.2 143 51.0
Pp3c13_19470 Physcomitrium patens HOM05D004561 ORTHO05D005315 8.8e-30 134.8 219 36.1
Mapoly0029s0047 Marchantia polymorpha HOM05D004561 ORTHO05D005315 2.0e-29 133.7 241 37.3
AUR62002652 Chenopodium quinoa HOM05D004561 ORTHO05D005315 2.8e-28 129.8 229 35.8
CiPaw.16G098200 Carya illinoinensis HOM05D004561 ORTHO05D005315 6.9e-27 125.2 119 56.3
vmacro21453 Vaccinium macrocarpon HOM05D004561 ORTHO05D005315 2.6e-26 123.2 118 48.3
CAN.G1530.1 Capsicum annuum HOM05D004561 ORTHO05D005315 1.0e-25 121.3 147 43.5
arahy.Tifrunner.gnm1.ann1.3X42ZC Arachis hypogaea HOM05D004561 ORTHO05D005315 2.2e-25 120.2 113 53.1
HPP92_027560 Vanilla planifolia HOM05D004561 ORTHO05D005315 3.8e-25 119.4 164 41.5
Cpa.g.sc437.1 Carica papaya HOM05D004561 ORTHO05D005315 5.0e-25 119.0 130 50.8
PSO761G0502 Papaver somniferum HOM05D004561 ORTHO05D005315 1.4e-24 117.5 120 49.2
Sopen05g006540 Solanum pennellii HOM05D004561 ORTHO05D005315 1.9e-24 117.1 144 44.4
MCO09G807 Micromonas commoda HOM05D004561 ORTHO05D005315 9.4e-24 114.8 219 33.8
Zm00001eb066050 Zea mays HOM05D004561 ORTHO05D005315 2.1e-23 113.6 147 39.5
MD06G1059000 Malus domestica HOM05D004561 ORTHO05D005315 4.7e-23 112.5 111 52.3
Carub.0008s0419 Capsella rubella HOM05D004561 ORTHO05D005315 6.1e-23 112.1 89 59.6
Nitab4.5_0000560g0110 Nicotiana tabacum HOM05D004561 ORTHO05D005315 7.9e-23 111.7 119 48.7
arahy.Tifrunner.gnm1.ann1.Y05SLV Arachis hypogaea HOM05D004561 ORTHO05D005315 1.5e-21 107.5 96 55.2
Hund02231 Selenicereus undatus HOM05D004561 ORTHO05D005315 4.4e-21 105.9 212 32.1
Hund26251 Selenicereus undatus HOM05D004561 ORTHO05D005315 9.7e-21 104.8 124 45.2
Sopen08g022960 Solanum pennellii HOM05D004561 ORTHO05D005315 1.0e-17 94.7 99 51.5
Solyc05g010730.3 Solanum lycopersicum HOM05D004561 ORTHO05D005315 1.7e-17 94.0 65 67.7
Nitab4.5_0013603g0010 Nicotiana tabacum HOM05D004561 ORTHO05D005315 4.2e-16 89.4 71 59.2
SalBow1G7315 Salvia bowleyana HOM05D004561 ORTHO05D005315 5.5e-16 89.0 217 30.4
MBI08_g32523_MAGBIO Magnolia biondii HOM05D004561 ORTHO05D005315 1.6e-15 87.4 76 56.6
Haze_18936 Corylus avellana HOM05D004561 ORTHO05D005315 3.6e-15 86.3 125 44.0
SEGI_12631 Sequoiadendron giganteum HOM05D004561 ORTHO05D005315 3.6e-15 86.3 101 45.5
SalBow1G4548 Salvia bowleyana HOM05D004561 ORTHO05D005315 3.3e-13 79.7 99 45.5
PRCOL_00001899 Prasinoderma coloniale HOM05D004561 ORTHO05D005315 4.4e-13 79.3 227 26.0
SHI05852 Sapria himalayana HOM05D000002 ORTHO05D000001 9.7e-13 78.2 92 44.6
CSS0005948 Camellia sinensis var. sinensis HOM05D004561 ORTHO05D005315 1.1e-11 74.7 50 68.0
CSS0036958 Camellia sinensis var. sinensis HOM05D004561 ORTHO05D005315 1.1e-11 74.7 50 68.0
CSS0006634 Camellia sinensis var. sinensis HOM05D004561 ORTHO05D005315 5.3e-11 72.4 50 66.0
CSS0005045 Camellia sinensis var. sinensis HOM05D004561 ORTHO05D005315 9.1e-11 71.6 50 66.0
SalBow1G4039 Salvia bowleyana HOM05D004561 ORTHO05D005315 1.6e-10 70.9 50 60.0
SalBow1G5331 Salvia bowleyana HOM05D004561 ORTHO05D005315 3.5e-10 69.7 50 60.0
CBR_g12600 Chara braunii HOM05D005240 ORTHO05D006471 4.5e-10 69.3 354 22.6
SalBow1G2796 Salvia bowleyana HOM05D004561 ORTHO05D005315 4.5e-10 69.3 50 60.0
Cre06.g300100 Chlamydomonas reinhardtii HOM05D004561 ORTHO05D005315 5.9e-10 68.9 263 24.3
SalBow1G6765 Salvia bowleyana HOM05D004561 ORTHO05D005315 2.2e-09 67.0 64 48.4
SalBow1G4445 Salvia bowleyana HOM05D025598 ORTHO05D005315 2.9e-09 66.6 52 51.9
RcHm_v2.0_Chr7g0204241 Rosa chinensis HOM05D004561 ORTHO05D005315 8.5e-09 65.1 78 43.6
SHI05337 Sapria himalayana HOM05D004561 ORTHO05D005315 8.5e-09 65.1 42 59.5
SalBow1G0427 Salvia bowleyana HOM05D006885 ORTHO05D008606 1.5e-08 64.3 55 54.5
Cpa.g.c32558.1 Carica papaya HOM05D004561 ORTHO05D005315 4.7e-07 59.3 100 36.0
RcHm_v2.0_Chr7g0204201 Rosa chinensis HOM05D004561 ORTHO05D005315 1.8e-06 57.4 35 71.4
Ca_17309_v3 Cicer arietinum L. HOM05D002967 ORTHO05D003281 3.0e-06 56.6 36 61.1


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