Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p49640 Brassica napus HOM05D006876 ORTHO05D008708 4.2e-133 478.0 238 100.0
BraA09t40417Z Brassica rapa HOM05D006876 ORTHO05D008708 7.9e-124 447.2 221 100.0
C08p32050 Brassica napus HOM05D006876 ORTHO05D008708 2.5e-122 442.2 243 93.0
BcaC07g39992 Brassica carinata HOM05D006876 ORTHO05D008708 1.3e-121 439.9 243 92.6
BolC8t50823H Brassica oleracea HOM05D006876 ORTHO05D008708 1.0e-115 420.2 221 95.0
Sp5g05770 Schrenkiella parvula HOM05D006876 ORTHO05D008708 4.6e-108 394.8 221 87.3
BcaC07g40117 Brassica carinata HOM05D006876 ORTHO05D008708 4.8e-105 384.8 222 87.8
Thhalv10006232m.g Eutrema salsugineum HOM05D006876 ORTHO05D008708 1.0e-102 377.1 221 84.2
AL5G38200 Arabidopsis lyrata HOM05D006876 ORTHO05D008708 7.2e-101 370.9 221 82.8
Carub.0005s2355 Capsella rubella HOM05D006876 ORTHO05D008708 9.4e-101 370.5 221 82.8
CARHR166970 Cardamine hirsuta HOM05D006876 ORTHO05D008708 2.0e-98 362.8 222 82.9
AT3G56820 Arabidopsis thaliana HOM05D006876 ORTHO05D008708 1.1e-96 357.1 223 80.7
Aa31LG10G11670 Aethionema arabicum HOM05D006876 ORTHO05D008708 1.9e-93 346.3 222 77.5
THA.LOC104803253 Tarenaya hassleriana HOM05D006876 ORTHO05D008708 3.5e-87 325.5 221 70.6
Cpa.g.sc33.174 Carica papaya HOM05D006876 ORTHO05D008708 2.4e-72 276.2 232 60.8
MELO3C019167.2 Cucumis melo HOM05D006876 ORTHO05D008708 2.5e-69 266.2 209 62.2
Prupe.7G023500 Prunus persica HOM05D006876 ORTHO05D008708 1.6e-68 263.5 233 60.1
ClCG04G005040 Citrullus lanatus HOM05D006876 ORTHO05D008708 3.6e-68 262.3 209 62.2
CsaV3_4G029000 Cucumis sativus L. HOM05D006876 ORTHO05D008708 4.7e-68 261.9 209 62.2
CiPaw.09G161500 Carya illinoinensis HOM05D006876 ORTHO05D008708 6.1e-68 261.5 215 59.5
MD12G1111100 Malus domestica HOM05D006876 ORTHO05D008708 2.3e-67 259.6 229 56.8
Peaxi162Scf00003g05358 Petunia axillaris HOM05D006876 ORTHO05D008708 2.3e-67 259.6 239 57.3
CSS0024544 Camellia sinensis var. sinensis HOM05D006876 ORTHO05D008708 2.0e-66 256.5 233 56.7
Dinv13650 Davidia involucrata HOM05D006876 ORTHO05D008708 4.9e-65 251.9 220 58.6
Sopen10g028620 Solanum pennellii HOM05D006876 ORTHO05D008708 6.3e-65 251.5 247 55.9
Solyc10g076930.2 Solanum lycopersicum HOM05D006876 ORTHO05D008708 1.1e-64 250.8 247 56.3
Nitab4.5_0000123g0090 Nicotiana tabacum HOM05D006876 ORTHO05D008708 1.8e-64 250.0 242 57.4
Atru.chr8.919 Acer truncatum HOM05D006876 ORTHO05D008708 2.4e-64 249.6 231 57.6
Sed0006068 Sechium edule HOM05D006876 ORTHO05D008708 2.4e-64 249.6 207 59.9
Manes.09G001600 Manihot esculenta HOM05D006876 ORTHO05D008708 4.1e-64 248.8 235 57.0
Ah.13g077470 Amaranthus hybridus HOM05D006876 ORTHO05D008708 1.6e-63 246.9 249 52.2
QL07p015416 Quercus lobata HOM05D006876 ORTHO05D008708 1.6e-63 246.9 234 56.0
EL10Ac3g07376 Beta vulgaris HOM05D006876 ORTHO05D008708 2.0e-63 246.5 237 54.4
Potri.006G026300 Populus trichocarpa HOM05D006876 ORTHO05D008708 4.5e-63 245.4 235 57.0
PSO339G4949 Papaver somniferum HOM05D006876 ORTHO05D008708 7.8e-63 244.6 242 52.1
RhsimUnG0021300 Rhododendron simsii HOM05D006876 ORTHO05D008708 7.8e-63 244.6 212 60.4
RcHm_v2.0_Chr7g0183121 Rosa chinensis HOM05D006876 ORTHO05D008708 7.8e-63 244.6 208 59.6
Nitab4.5_0002131g0070 Nicotiana tabacum HOM05D006876 ORTHO05D008708 1.3e-62 243.8 246 55.7
PSO384G4569 Papaver somniferum HOM05D006876 ORTHO05D008708 1.3e-62 243.8 208 57.2
Hma1.2p1_0694F.1_g204340 Hydrangea macrophylla HOM05D006876 ORTHO05D008708 1.7e-62 243.4 235 51.9
PGSC0003DMG400007191 Solanum tuberosum HOM05D006876 ORTHO05D008708 1.7e-62 243.4 251 54.2
Lsat_1_v5_gn_6_24200 Lactuca sativa HOM05D006876 ORTHO05D008708 3.8e-62 242.3 220 57.3
FAN19G1913 Fragaria x ananassa HOM05D006876 ORTHO05D008708 5.0e-62 241.9 238 53.4
Sabra06G0019500 Salix brachista HOM05D006876 ORTHO05D008708 5.0e-62 241.9 235 56.6
Cfa019902 Carpinus fangiana HOM05D006876 ORTHO05D008708 6.6e-62 241.5 208 58.2
Thecc.05G117700 Theobroma cacao HOM05D006876 ORTHO05D008708 6.6e-62 241.5 239 55.6
GSVIVG01025828001 Vitis vinifera HOM05D006876 ORTHO05D008708 6.6e-62 241.5 234 54.3
Ciclev10012641m.g Citrus clementina HOM05D006876 ORTHO05D008708 1.5e-61 240.4 241 53.9
Sc19g0007790 Simmondsia chinensis HOM05D006876 ORTHO05D008708 1.5e-61 240.4 232 53.0
Lalb_Chr24g0400801 Lupinus albus HOM05D006876 ORTHO05D008708 3.3e-61 239.2 215 56.3
MSTRG.10760 Avicennia marina HOM05D006876 ORTHO05D008708 5.6e-61 238.4 244 53.3
arahy.Tifrunner.gnm1.ann1.SXUX32 Arachis hypogaea HOM05D006876 ORTHO05D008708 7.3e-61 238.0 235 52.8
arahy.Tifrunner.gnm1.ann1.U8TZLL Arachis hypogaea HOM05D006876 ORTHO05D008708 7.3e-61 238.0 235 52.8
TWI53G1364 Tripterygium wilfordii HOM05D006876 ORTHO05D008708 7.3e-61 238.0 239 52.3
FAN28G2491 Fragaria x ananassa HOM05D006876 ORTHO05D008708 1.2e-60 237.3 238 52.9
PGR142G2444 Punica granatum HOM05D006876 ORTHO05D008708 1.6e-60 236.9 230 56.1
CANSAT78G2074 Cannabis sativa HOM05D006876 ORTHO05D008708 2.1e-60 236.5 206 57.8
vmacro07595 Vaccinium macrocarpon HOM05D006876 ORTHO05D008708 6.1e-60 235.0 269 50.6
Hund24486 Selenicereus undatus HOM05D006876 ORTHO05D008708 8.0e-60 234.6 230 53.0
Lj1g0024709 Lotus japonicus HOM05D006876 ORTHO05D008708 8.9e-59 231.1 221 57.9
Eucgr.K01704 Eucalyptus grandis HOM05D006876 ORTHO05D008708 1.5e-58 230.3 244 52.5
COL.COLO4_21445 Corchorus olitorius HOM05D006876 ORTHO05D008708 2.0e-58 229.9 240 53.3
Cc06_g21190 Coffea canephora HOM05D006876 ORTHO05D008708 4.4e-58 228.8 202 56.9
Gohir.D13G092600 Gossypium hirsutum HOM05D006876 ORTHO05D008708 4.4e-58 228.8 238 51.3
AUR62020968 Chenopodium quinoa HOM05D006876 ORTHO05D008708 5.8e-58 228.4 230 51.3
Duzib114G0933 Durio zibethinus HOM05D006876 ORTHO05D008708 2.9e-57 226.1 240 52.9
Migut.K00190 Erythranthe guttata HOM05D006876 ORTHO05D008708 2.9e-57 226.1 205 55.6
MBI19_g10813_MAGBIO Magnolia biondii HOM05D006876 ORTHO05D008708 4.9e-57 225.3 232 52.6
SGA_v2.0_scaffold123G33492 Striga asiatica HOM05D001269 ORTHO05D001083 4.9e-57 225.3 246 51.6
Gohir.A13G086570 Gossypium hirsutum HOM05D006876 ORTHO05D008708 6.4e-57 224.9 237 51.1
SalBow1G4764 Salvia bowleyana HOM05D006876 ORTHO05D008708 1.4e-56 223.8 210 55.2
Phvul.001G101300 Phaseolus vulgaris HOM05D006876 ORTHO05D008708 4.1e-56 222.2 230 50.9
Hund24492 Selenicereus undatus HOM05D006876 ORTHO05D008708 4.1e-56 222.2 223 53.8
Medtr7g088040 Medicago truncatula HOM05D006876 ORTHO05D008708 5.4e-56 221.9 211 54.0
Gorai.010G139600 Gossypium raimondii HOM05D006876 ORTHO05D008708 1.2e-55 220.7 245 49.8
VMungo1383G0045 Vigna mungo HOM05D006876 ORTHO05D008708 1.2e-55 220.7 220 53.2
unitig_899.g15477 Utricularia gibba HOM05D006876 ORTHO05D008708 1.0e-54 217.6 238 50.0
Os01g0810200 Oryza sativa ssp. japonica HOM05D006876 ORTHO05D008708 2.3e-54 216.5 242 50.4
Haze_20349 Corylus avellana HOM05D006876 ORTHO05D008708 3.9e-54 215.7 236 49.6
Migut.K00192 Erythranthe guttata HOM05D006876 ORTHO05D008708 1.5e-53 213.8 200 54.5
Zm00001eb150270 Zea mays HOM05D006876 ORTHO05D008708 2.5e-53 213.0 242 48.3
Aqoxy1G01501 Aquilegia oxysepala HOM05D006876 ORTHO05D008708 4.3e-53 212.2 227 51.1
Glyma.19G122400 Glycine max HOM05D006876 ORTHO05D008708 2.1e-52 209.9 202 51.0
Glyma.03G003700 Glycine max HOM05D006876 ORTHO05D008708 6.2e-52 208.4 204 51.5
arahy.Tifrunner.gnm1.ann1.R6YTNA Arachis hypogaea HOM05D006876 ORTHO05D008708 4.0e-51 205.7 207 52.2
Nn7g37203 Nelumbo nucifera HOM05D006876 ORTHO05D008708 2.9e-49 199.5 216 50.0
TAR623G1567 Trochodendron aralioides HOM05D006876 ORTHO05D008708 4.9e-49 198.7 151 60.9
Aqoxy1G01505 Aquilegia oxysepala HOM05D006876 ORTHO05D008708 1.6e-47 193.7 131 67.2
Psat3g083640 Pisum sativum HOM05D006876 ORTHO05D008708 2.7e-47 193.0 135 64.4
DCAR_020618 Daucus carota HOM05D006876 ORTHO05D008708 4.0e-43 179.1 110 73.6
ATR1096G134 Amborella trichopoda HOM05D006876 ORTHO05D008708 5.2e-43 178.7 205 46.8
Lj4A828G46 Lonicera japonica HOM05D006876 ORTHO05D008708 5.2e-43 178.7 118 67.8
SEGI_40976 Sequoiadendron giganteum HOM05D006876 ORTHO05D008708 2.9e-41 172.9 137 58.4
Hma1.2p1_0694F.1_g204350 Hydrangea macrophylla HOM05D006876 ORTHO05D008708 9.2e-40 167.9 108 68.5
ECA233G0065 Erigeron canadensis HOM05D000444 ORTHO05D000489 4.6e-39 165.6 108 67.6
Oeu032953.2 Olea europaea HOM05D006876 ORTHO05D008708 1.7e-38 163.7 299 37.8
CSS0021314 Camellia sinensis var. sinensis HOM05D006876 ORTHO05D008708 3.9e-38 162.5 109 67.0
FvH4_1g29600 Fragaria vesca HOM05D006876 ORTHO05D008708 1.2e-36 157.5 171 48.5
QL05p001451 Quercus lobata HOM05D006876 ORTHO05D008708 2.2e-33 146.7 93 73.1
Lalb_Chr02g0157641 Lupinus albus HOM05D006876 ORTHO05D008708 7.8e-31 138.3 183 44.3
arahy.Tifrunner.gnm1.ann1.S4H51W Arachis hypogaea HOM05D006876 ORTHO05D008708 2.3e-30 136.7 139 48.2
Actinidia37859 Actinidia chinensis HOM05D006876 ORTHO05D008708 3.3e-29 132.9 87 72.4
arahy.Tifrunner.gnm1.ann1.8Z6XIB Arachis hypogaea HOM05D006876 ORTHO05D008708 5.8e-26 122.1 77 67.5
arahy.Tifrunner.gnm1.ann1.QI3NWI Arachis hypogaea HOM05D006876 ORTHO05D008708 2.2e-25 120.2 76 65.8
CBR_g17867 Chara braunii HOM05D006876 ORTHO05D008708 1.0e-22 111.3 118 44.9
arahy.Tifrunner.gnm1.ann1.ERVJ4V Arachis hypogaea HOM05D006876 ORTHO05D008708 2.3e-22 110.2 188 35.6
QL05p001731 Quercus lobata HOM05D006876 ORTHO05D008708 8.4e-17 91.7 69 71.0
QL05p085390 Quercus lobata HOM05D006876 ORTHO05D008708 8.4e-17 91.7 69 71.0
Oeu007164.1 Olea europaea HOM05D006876 ORTHO05D008708 5.4e-16 89.0 71 56.3
MCO02G060 Micromonas commoda HOM05D006876 ORTHO05D008708 7.1e-16 88.6 131 36.6
arahy.Tifrunner.gnm1.ann1.Q5BN79 Arachis hypogaea HOM05D006876 ORTHO05D008708 2.3e-14 83.6 57 63.2
Ca_08331_v3 Cicer arietinum L. HOM05D006876 ORTHO05D008708 5.1e-14 82.4 68 60.3
C06p23790 Brassica napus HOM05D006876 ORTHO05D040197 7.4e-13 78.6 64 65.6
BolC6t37548H Brassica oleracea HOM05D006876 ORTHO05D040197 7.4e-13 78.6 64 65.6
DCAR_020619 Daucus carota HOM05D006876 ORTHO05D008708 7.4e-13 78.6 99 45.5
Glyma.10G143650 Glycine max HOM05D006876 ORTHO05D008708 2.0e-10 70.5 43 65.1
Oeu039192.1 Olea europaea HOM05D006876 ORTHO05D008708 2.5e-08 63.5 106 43.4
HPP92_016900 Vanilla planifolia HOM05D006876 ORTHO05D008708 3.9e-06 56.2 102 39.2


User provided reference genes

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