Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p49470 Brassica napus HOM05D008477 ORTHO05D024345 3.5e-214 748.0 364 100.0
BraA09t40400Z Brassica rapa HOM05D008477 ORTHO05D024345 4.3e-196 688.0 364 93.4
BolC8t50804H Brassica oleracea HOM05D008477 ORTHO05D024345 1.3e-179 633.3 364 87.6
C08p31850 Brassica napus HOM05D008477 ORTHO05D024345 7.6e-177 624.0 364 87.4
BcaC07g39968 Brassica carinata HOM05D008477 ORTHO05D024345 1.4e-175 619.8 357 87.1
BcaC07g40139 Brassica carinata HOM05D008477 ORTHO05D012146 4.4e-132 475.3 388 67.5
BraA07t29962Z Brassica rapa HOM05D008477 ORTHO05D021917 8.6e-96 354.8 383 55.6
A07p22990 Brassica napus HOM05D008477 ORTHO05D021917 1.2e-92 344.4 381 55.1
BolC6t37534H Brassica oleracea HOM05D008477 ORTHO05D021917 1.7e-91 340.5 383 55.6
BcaC08g44793 Brassica carinata HOM05D008477 ORTHO05D021917 6.4e-83 312.0 378 52.6
C06p23620 Brassica napus HOM05D008477 ORTHO05D021917 6.4e-83 312.0 371 52.3
BcaC08g44792 Brassica carinata HOM05D008477 ORTHO05D021917 2.1e-81 307.0 385 52.5
BcaB02g07648 Brassica carinata HOM05D008477 ORTHO05D016040 2.1e-70 270.4 385 46.5
Thhalv10006451m.g Eutrema salsugineum HOM05D008477 ORTHO05D012146 4.2e-42 176.4 155 58.1
Thhalv10027901m.g Eutrema salsugineum HOM05D008477 ORTHO05D012146 4.6e-41 172.9 162 53.7
C01p33000 Brassica napus HOM05D008477 ORTHO05D016040 3.3e-39 166.8 179 52.0
AL5G37870 Arabidopsis lyrata HOM05D008477 ORTHO05D012146 2.1e-38 164.1 154 53.9
Sp7g00810 Schrenkiella parvula HOM05D008477 ORTHO05D012146 3.7e-38 163.3 158 54.4
BcaB02g07910 Brassica carinata HOM05D008477 ORTHO05D012146 1.5e-36 157.9 157 51.6
AT3G56520 Arabidopsis thaliana HOM05D008477 ORTHO05D012146 1.3e-35 154.8 159 52.8
BcaC08g44507 Brassica carinata HOM05D008477 ORTHO05D012146 1.7e-35 154.5 157 49.0
C06p19590 Brassica napus HOM05D008477 ORTHO05D012146 1.7e-35 154.5 157 49.0
BolC6t37152H Brassica oleracea HOM05D008477 ORTHO05D012146 1.1e-34 151.8 157 48.4
BcaC09g49781 Brassica carinata HOM05D008477 ORTHO05D016040 1.9e-34 151.0 130 57.7
A07p20670 Brassica napus HOM05D008477 ORTHO05D012146 9.3e-34 148.7 157 49.0
BraA07t29758Z Brassica rapa HOM05D008477 ORTHO05D012146 9.3e-34 148.7 157 49.0
BcaB06g27594 Brassica carinata HOM05D008477 ORTHO05D012146 1.5e-31 141.4 154 49.4
CARHR213280 Cardamine hirsuta HOM05D008477 ORTHO05D012146 1.9e-31 141.0 158 49.4
C04p48180 Brassica napus HOM05D008477 ORTHO05D012146 2.5e-31 140.6 161 47.2
BolC7t41496H Brassica oleracea HOM05D008477 ORTHO05D016040 3.3e-31 140.2 149 51.7
BolC4t26408H Brassica oleracea HOM05D008477 ORTHO05D012146 4.3e-31 139.8 161 47.2
BolC1t03239H Brassica oleracea HOM05D008477 ORTHO05D016040 3.7e-30 136.7 179 45.3
A04p14140 Brassica napus HOM05D008477 ORTHO05D012146 1.1e-29 135.2 161 46.6
BraA04t17075Z Brassica rapa HOM05D008477 ORTHO05D012146 1.1e-29 135.2 161 46.6
BolC4t23752H Brassica oleracea HOM05D008477 ORTHO05D016040 5.9e-28 129.4 130 51.5
AL5G16460 Arabidopsis lyrata HOM05D008477 ORTHO05D012146 1.0e-27 128.6 156 50.6
AT5G41090 Arabidopsis thaliana HOM05D008477 ORTHO05D012146 1.0e-27 128.6 159 45.3
AL7G48460 Arabidopsis lyrata HOM05D008477 ORTHO05D012146 1.3e-27 128.3 163 46.0
BcaC02g10997 Brassica carinata HOM05D008477 ORTHO05D016040 1.9e-26 124.4 167 43.1
C04p22350 Brassica napus HOM05D008477 ORTHO05D016040 9.7e-23 112.1 120 49.2
Carub.0007s3440 Capsella rubella HOM05D008477 ORTHO05D012146 9.7e-23 112.1 157 42.0
BcaC03g16257 Brassica carinata HOM05D008477 ORTHO05D016040 1.0e-19 102.1 160 41.9
C05p36490 Brassica napus HOM05D008477 ORTHO05D039864 3.8e-19 100.1 85 58.8
Aa31LG9G800 Aethionema arabicum HOM05D008477 ORTHO05D012146 1.6e-17 94.7 154 40.3
AL5G39610 Arabidopsis lyrata HOM05D010123 ORTHO05D012290 1.7e-11 74.7 230 31.3
BcaC05g27661 Brassica carinata HOM05D008477 ORTHO05D039864 5.0e-11 73.2 57 63.2
A09p30100 Brassica napus HOM05D008477 ORTHO05D012146 3.2e-10 70.5 118 40.7
BcaC02g09975 Brassica carinata HOM05D010123 ORTHO05D012290 6.1e-09 66.2 121 38.0
BcaC02g09978 Brassica carinata HOM05D010123 ORTHO05D012290 6.1e-09 66.2 121 38.0
C04p34410 Brassica napus HOM05D010123 ORTHO05D012290 6.1e-09 66.2 121 38.0
BolC4t25003H Brassica oleracea HOM05D010123 ORTHO05D012290 6.1e-09 66.2 121 38.0
BraA02t07762Z Brassica rapa HOM05D008477 ORTHO05D016040 5.2e-08 63.2 101 38.6
BcaB02g08286 Brassica carinata HOM05D010123 ORTHO05D012290 1.5e-07 61.6 177 28.8
Carub.0005s2480 Capsella rubella HOM05D010123 ORTHO05D012290 1.5e-07 61.6 151 36.4
Sp5g04760 Schrenkiella parvula HOM05D010123 ORTHO05D012290 4.4e-07 60.1 146 35.6
BcaB02g07564 Brassica carinata HOM05D010123 ORTHO05D012290 7.5e-07 59.3 160 33.1
BraA04t16006Z Brassica rapa HOM05D010123 ORTHO05D012290 7.5e-07 59.3 173 30.1
A04p02820 Brassica napus HOM05D010123 ORTHO05D012290 4.8e-06 56.6 162 31.5


User provided reference genes

Program Settings