Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p48990 Brassica napus HOM05D005937 ORTHO05D008151 0.0e+00 1785.0 875 100.0
BraA09t40354Z Brassica rapa HOM05D005937 ORTHO05D008151 0.0e+00 1785.0 875 100.0
C08p31350 Brassica napus HOM05D005937 ORTHO05D008151 0.0e+00 1726.5 877 96.8
Sp5g06500 Schrenkiella parvula HOM05D005937 ORTHO05D008151 0.0e+00 1630.5 891 90.7
Thhalv10005783m.g Eutrema salsugineum HOM05D005937 ORTHO05D008151 0.0e+00 1605.5 892 89.6
Carub.0005s2277 Capsella rubella HOM05D005937 ORTHO05D008151 0.0e+00 1554.7 886 86.8
AL5G37310 Arabidopsis lyrata HOM05D005937 ORTHO05D008151 0.0e+00 1550.4 895 86.3
AT3G56040 Arabidopsis thaliana HOM05D005937 ORTHO05D008151 0.0e+00 1550.4 889 87.1
CARHR166110 Cardamine hirsuta HOM05D005937 ORTHO05D008151 0.0e+00 1550.0 886 86.9
Aa31LG10G10960 Aethionema arabicum HOM05D005937 ORTHO05D008151 0.0e+00 1479.5 894 82.7
THA.LOC104824329 Tarenaya hassleriana HOM05D005937 ORTHO05D008151 0.0e+00 1336.2 879 74.4
THA.LOC104811372 Tarenaya hassleriana HOM05D005937 ORTHO05D008151 0.0e+00 1333.5 892 73.7
Atru.chr12.85 Acer truncatum HOM05D005937 ORTHO05D008151 0.0e+00 1177.5 882 66.4
Potri.010G185800 Populus trichocarpa HOM05D005937 ORTHO05D008151 0.0e+00 1176.0 873 66.3
Duzib114G0783 Durio zibethinus HOM05D005937 ORTHO05D008151 0.0e+00 1149.4 882 65.5
Ciclev10030686m.g Citrus clementina HOM05D005937 ORTHO05D008151 0.0e+00 1125.5 877 64.3
FvH4_7g24830 Fragaria vesca HOM05D005937 ORTHO05D008151 0.0e+00 1125.2 870 63.8
FAN01G2918 Fragaria x ananassa HOM05D005937 ORTHO05D008151 0.0e+00 1125.2 867 64.0
Haze_17256 Corylus avellana HOM05D005937 ORTHO05D008151 0.0e+00 1123.6 821 67.4
RcHm_v2.0_Chr1g0370701 Rosa chinensis HOM05D005937 ORTHO05D008151 0.0e+00 1123.6 876 63.7
Sabra10G0143100 Salix brachista HOM05D005937 ORTHO05D008151 0.0e+00 1123.2 898 61.7
Manes.10G010100 Manihot esculenta HOM05D005937 ORTHO05D008151 0.0e+00 1122.8 883 64.0
Thecc.10G012700 Theobroma cacao HOM05D005937 ORTHO05D008151 0.0e+00 1122.1 876 64.4
FAN06G2004 Fragaria x ananassa HOM05D005937 ORTHO05D008151 0.0e+00 1121.3 867 63.9
GSVIVG01032777001 Vitis vinifera HOM05D005937 ORTHO05D008151 0.0e+00 1120.9 872 63.9
CiPaw.02G194600 Carya illinoinensis HOM05D005937 ORTHO05D008151 0.0e+00 1114.8 883 63.6
MD07G1224900 Malus domestica HOM05D005937 ORTHO05D008151 0.0e+00 1114.8 877 63.7
FAN03G2902 Fragaria x ananassa HOM05D005937 ORTHO05D008151 0.0e+00 1113.6 884 62.7
TWI09G1402 Tripterygium wilfordii HOM05D005937 ORTHO05D008151 0.0e+00 1112.4 878 63.2
Cpa.g.sc19.149 Carica papaya HOM05D005937 ORTHO05D008151 0.0e+00 1102.4 912 61.2
Migut.F01477 Erythranthe guttata HOM05D005937 ORTHO05D008151 0.0e+00 1095.5 882 63.5
QL08p063536 Quercus lobata HOM05D005937 ORTHO05D008151 0.0e+00 1094.3 882 63.2
CSS0046957 Camellia sinensis var. sinensis HOM05D005937 ORTHO05D008151 0.0e+00 1094.0 900 62.6
Actinidia00667 Actinidia chinensis HOM05D005937 ORTHO05D008151 0.0e+00 1091.6 871 64.3
TAR633G1521 Trochodendron aralioides HOM05D005937 ORTHO05D008151 0.0e+00 1087.0 873 62.8
Eucgr.J00183 Eucalyptus grandis HOM05D005937 ORTHO05D008151 0.0e+00 1086.2 819 65.7
Hund15900 Selenicereus undatus HOM05D005937 ORTHO05D008151 0.0e+00 1084.7 877 62.0
ClCG11G006010 Citrullus lanatus HOM05D005937 ORTHO05D008151 0.0e+00 1083.6 817 64.5
Phvul.001G244900 Phaseolus vulgaris HOM05D005937 ORTHO05D008151 0.0e+00 1081.2 866 63.0
Ah.16g103770 Amaranthus hybridus HOM05D005937 ORTHO05D008151 0.0e+00 1080.5 885 61.9
Gorai.011G291300 Gossypium raimondii HOM05D005937 ORTHO05D008151 0.0e+00 1080.5 886 62.5
Prupe.2G253500 Prunus persica HOM05D005937 ORTHO05D008151 0.0e+00 1080.5 872 62.8
Gohir.A10G239000 Gossypium hirsutum HOM05D005937 ORTHO05D008151 0.0e+00 1079.7 865 63.4
CANSAT56G2579 Cannabis sativa HOM05D005937 ORTHO05D008151 0.0e+00 1078.5 880 61.9
CsaV3_6G001960 Cucumis sativus L. HOM05D005937 ORTHO05D008151 0.0e+00 1078.5 819 64.5
Glyma.11G231700 Glycine max HOM05D005937 ORTHO05D008151 1.2e-311 1072.8 821 64.8
Nn2g10945 Nelumbo nucifera HOM05D005937 ORTHO05D008151 1.2e-311 1072.8 841 63.6
Hma1.2p1_0523F.1_g172080 Hydrangea macrophylla HOM05D005937 ORTHO05D008151 1.8e-311 1072.4 815 64.3
EL10Ac2g04871 Beta vulgaris HOM05D005937 ORTHO05D008151 2.0e-310 1068.9 926 59.5
Duzib106G1087 Durio zibethinus HOM05D005937 ORTHO05D008151 2.6e-310 1068.5 876 62.0
Nitab4.5_0000058g0250 Nicotiana tabacum HOM05D005937 ORTHO05D008151 7.7e-310 1067.0 861 62.4
Rhsim09G0179300 Rhododendron simsii HOM05D005937 ORTHO05D008151 1.0e-309 1066.6 873 63.1
Lalb_Chr23g0277021 Lupinus albus HOM05D005937 ORTHO05D008151 6.5e-309 1063.9 892 60.3
Medtr3g071440 Medicago truncatula HOM05D005937 ORTHO05D008151 1.1e-308 1063.1 876 63.1
Sed0020446 Sechium edule HOM05D005937 ORTHO05D008151 4.2e-308 1061.2 814 64.5
Nitab4.5_0000969g0030 Nicotiana tabacum HOM05D005937 ORTHO05D008151 3.6e-307 1058.1 881 60.5
Glyma.18G025500 Glycine max HOM05D005937 ORTHO05D008151 3.0e-306 1055.0 859 62.5
Lj6g0019628 Lotus japonicus HOM05D005937 ORTHO05D008151 8.8e-306 1053.5 840 62.9
Ca_15144_v3 Cicer arietinum L. HOM05D005937 ORTHO05D008151 8.3e-304 1047.0 837 63.6
arahy.Tifrunner.gnm1.ann1.0WF02T Arachis hypogaea HOM05D005937 ORTHO05D008151 4.1e-303 1044.6 822 63.0
CAN.G19.18 Capsicum annuum HOM05D005937 ORTHO05D008151 9.1e-303 1043.5 883 59.9
arahy.Tifrunner.gnm1.ann1.6RBS9T Arachis hypogaea HOM05D005937 ORTHO05D008151 2.7e-302 1042.0 822 62.9
Psat5g130440 Pisum sativum HOM05D005937 ORTHO05D008151 5.9e-302 1040.8 825 63.8
VMungo1383G1379 Vigna mungo HOM05D005937 ORTHO05D008151 1.0e-301 1040.0 860 61.9
Solyc06g051080.4 Solanum lycopersicum HOM05D005937 ORTHO05D008151 2.9e-301 1038.5 893 59.2
Sopen06g016900 Solanum pennellii HOM05D005937 ORTHO05D008151 8.6e-301 1036.9 881 59.8
TPR.G10616 Trifolium pratense HOM05D005937 ORTHO05D008151 9.5e-300 1033.5 869 61.1
Lsat_1_v5_gn_2_123720 Lactuca sativa HOM05D005937 ORTHO05D008151 2.8e-299 1031.9 844 62.1
AUR62012278 Chenopodium quinoa HOM05D005937 ORTHO05D008151 1.2e-297 1026.5 817 61.8
Lj1C959G18 Lonicera japonica HOM05D005937 ORTHO05D008151 1.8e-295 1019.2 754 66.0
Oeu011112.1 Olea europaea HOM05D005937 ORTHO05D008151 3.1e-295 1018.5 965 55.5
vmacro10023 Vaccinium macrocarpon HOM05D005937 ORTHO05D008151 1.0e-293 1013.4 905 59.9
HanXRQChr07g0203141 Helianthus annuus HOM05D005937 ORTHO05D008151 1.3e-293 1013.1 883 59.5
ECA238G3710 Erigeron canadensis HOM05D005937 ORTHO05D008151 5.6e-292 1007.7 874 59.5
PSO170G3027 Papaver somniferum HOM05D005937 ORTHO05D008151 1.2e-291 1006.5 843 59.5
FAN10G1632 Fragaria x ananassa HOM05D005937 ORTHO05D008151 1.8e-290 1002.7 887 58.2
Aqoxy4G02431 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 5.2e-290 1001.1 820 61.3
PSO017G4998 Papaver somniferum HOM05D005937 ORTHO05D008151 8.9e-290 1000.3 844 59.5
DCAR_024814 Daucus carota HOM05D005937 ORTHO05D008151 4.4e-289 998.0 815 62.9
unitig_60.g25670 Utricularia gibba HOM05D005937 ORTHO05D008151 8.3e-288 993.8 881 58.3
Cfa001293 Carpinus fangiana HOM05D005937 ORTHO05D008151 9.5e-284 980.3 697 68.1
PGR044G1548 Punica granatum HOM05D005937 ORTHO05D008151 2.3e-282 975.7 873 58.2
AUR62022920 Chenopodium quinoa HOM05D005937 ORTHO05D008151 7.0e-279 964.1 740 63.1
Dinv21757 Davidia involucrata HOM05D005937 ORTHO05D008151 7.3e-276 954.1 880 58.3
ATR0174G021 Amborella trichopoda HOM05D005937 ORTHO05D008151 4.9e-272 941.4 857 55.8
Cc02_g06180 Coffea canephora HOM05D005937 ORTHO05D008151 2.1e-270 936.0 643 69.2
Gohir.D10G250900 Gossypium hirsutum HOM05D005937 ORTHO05D008151 7.8e-270 934.1 766 63.6
Peaxi162Scf00284g00620 Petunia axillaris HOM05D005937 ORTHO05D008151 1.3e-269 933.3 843 57.8
Os05g0468600 Oryza sativa ssp. japonica HOM05D005937 ORTHO05D008151 6.6e-269 931.0 800 56.1
MELO3C008313.2 Cucumis melo HOM05D005937 ORTHO05D008151 7.6e-265 917.5 696 65.4
Zm00001eb351780 Zea mays HOM05D005937 ORTHO05D008151 6.4e-264 914.4 854 54.2
COL.COLO4_25772 Corchorus olitorius HOM05D005937 ORTHO05D008151 1.4e-258 896.7 788 59.1
MD01G1156200 Malus domestica HOM05D005937 ORTHO05D008151 1.1e-255 887.1 700 63.6
MBI15_g40751_MAGBIO Magnolia biondii HOM05D005937 ORTHO05D008151 2.8e-251 872.5 902 51.8
Sc10g0002520 Simmondsia chinensis HOM05D005937 ORTHO05D008151 2.6e-249 865.9 689 63.7
Mapoly0007s0127 Marchantia polymorpha HOM05D005937 ORTHO05D008151 1.2e-238 830.5 860 49.3
AagrBONN_evm.TU.Sc2ySwM_368.2798 Anthoceros agrestis HOM05D005937 ORTHO05D008151 1.1e-234 817.4 821 49.9
SGA_v2.0_scaffold395G50730 Striga asiatica HOM05D005937 ORTHO05D008151 3.0e-229 799.3 745 57.9
Pp3c22_15610 Physcomitrium patens HOM05D005937 ORTHO05D008151 6.3e-227 791.6 870 47.8
SMO141G0067 Selaginella moellendorffii HOM05D005937 ORTHO05D008151 1.3e-216 757.3 748 51.3
BcaB01g00040 Brassica carinata HOM05D005937 ORTHO05D008151 3.0e-213 746.1 394 94.4
HPP92_007567 Vanilla planifolia HOM05D005937 ORTHO05D008151 3.8e-192 676.0 799 49.1
CBR_g61489 Chara braunii HOM05D005937 ORTHO05D008151 2.1e-190 670.2 576 54.0
Hma1.2p1_0523F.1_g172070 Hydrangea macrophylla HOM05D005937 ORTHO05D008151 5.6e-175 619.0 507 62.3
Actinidia00964 Actinidia chinensis HOM05D005937 ORTHO05D008151 6.4e-171 605.5 483 62.3
Cre12.g554250 Chlamydomonas reinhardtii HOM05D005937 ORTHO05D008151 2.8e-150 537.0 796 38.9
PRCOL_00004696 Prasinoderma coloniale HOM05D005937 ORTHO05D008151 2.4e-149 533.9 817 38.8
CDE04G2743 Ceratophyllum demersum HOM05D005937 ORTHO05D008151 6.9e-141 505.8 587 49.1
BolC8t50756H Brassica oleracea HOM05D005937 ORTHO05D008151 5.3e-117 426.4 206 98.1
HPP92_007578 Vanilla planifolia HOM05D005937 ORTHO05D008151 7.9e-113 412.5 402 53.2
RhsimUnG0153700 Rhododendron simsii HOM05D005937 ORTHO05D008151 4.3e-111 406.8 293 70.0
Rhsim12G0073000 Rhododendron simsii HOM05D005937 ORTHO05D008151 6.7e-104 382.9 292 67.5
SEGI_34891 Sequoiadendron giganteum HOM05D005937 ORTHO05D008151 8.0e-89 332.8 244 66.4
Aqoxy1G01260 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 1.1e-87 328.9 197 76.6
Aqoxy2G01148 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 2.6e-87 327.8 188 79.8
Aqoxy4G01451 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 1.7e-86 325.1 186 80.1
CDE04G2646 Ceratophyllum demersum HOM05D005937 ORTHO05D008151 8.5e-83 312.8 246 58.5
HPP92_007579 Vanilla planifolia HOM05D005937 ORTHO05D008151 1.7e-75 288.5 222 59.5
MCO05G015 Micromonas commoda HOM05D005937 ORTHO05D008151 1.5e-74 285.4 421 38.5
Ah.00g001390 Amaranthus hybridus HOM05D005937 ORTHO05D008151 1.4e-45 189.1 150 56.7
SEGI_09306 Sequoiadendron giganteum HOM05D005937 ORTHO05D008151 6.0e-44 183.7 139 61.2
vmacro09901 Vaccinium macrocarpon HOM05D003975 ORTHO05D009762 2.9e-22 111.7 165 36.4
Aqoxy4G01461 Aquilegia oxysepala HOM05D005937 ORTHO05D026713 3.8e-22 111.3 235 38.3
Hund15853 Selenicereus undatus HOM05D005937 ORTHO05D026713 3.5e-12 78.2 107 41.1
Aqoxy4G00767 Aquilegia oxysepala HOM05D005937 ORTHO05D026713 1.4e-08 66.2 89 46.1
Rhsim12G0072900 Rhododendron simsii HOM05D005937 ORTHO05D008151 4.0e-08 64.7 66 53.0
SEGI_37602 Sequoiadendron giganteum HOM05D005937 ORTHO05D026713 2.0e-07 62.4 194 27.3


User provided reference genes

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