Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p48980 Brassica napus HOM05D007655 ORTHO05D009698 3.1e-150 535.4 334 100.0
BraA09t40353Z Brassica rapa HOM05D007655 ORTHO05D009698 3.1e-150 535.4 334 100.0
C08p31340 Brassica napus HOM05D007655 ORTHO05D009698 1.8e-134 483.0 337 93.5
BolC8t50755H Brassica oleracea HOM05D007655 ORTHO05D009698 1.8e-134 483.0 337 93.5
Sp5g06510 Schrenkiella parvula HOM05D007655 ORTHO05D009698 2.8e-127 459.1 334 88.9
AT3G56030 Arabidopsis thaliana HOM05D007655 ORTHO05D009698 2.2e-119 433.0 333 78.4
AL5G37300 Arabidopsis lyrata HOM05D007655 ORTHO05D009698 5.0e-116 421.8 330 78.2
CARHR166100 Cardamine hirsuta HOM05D007655 ORTHO05D009698 4.2e-115 418.7 329 84.5
Carub.0005s2276 Capsella rubella HOM05D007655 ORTHO05D009698 6.7e-113 411.4 332 78.0
Thhalv10006093m.g Eutrema salsugineum HOM05D007655 ORTHO05D009698 8.2e-111 404.4 329 83.6
Aa31LG5G19330 Aethionema arabicum HOM05D007655 ORTHO05D009698 2.5e-91 339.7 329 71.1
Aa31LG10G10970 Aethionema arabicum HOM05D007655 ORTHO05D009698 3.6e-90 335.9 329 73.3
CARHR135280 Cardamine hirsuta HOM05D007655 ORTHO05D009698 4.9e-71 272.3 329 64.4
AT2G40240 Arabidopsis thaliana HOM05D007655 ORTHO05D009698 5.0e-68 262.3 329 63.8
AL4G37960 Arabidopsis lyrata HOM05D007655 ORTHO05D009698 4.7e-66 255.8 329 62.9
Carub.0004s2246 Capsella rubella HOM05D007655 ORTHO05D009698 1.2e-64 251.1 329 63.5
Cfa013933 Carpinus fangiana HOM05D007655 ORTHO05D009698 2.9e-55 219.9 329 44.7
Haze_22616 Corylus avellana HOM05D007655 ORTHO05D009698 9.2e-54 214.9 328 47.6
Manes.09G163100 Manihot esculenta HOM05D004613 ORTHO05D006095 1.6e-53 214.2 308 55.5
THA.LOC104810115 Tarenaya hassleriana HOM05D007655 ORTHO05D009698 2.7e-53 213.4 331 56.8
Cc00_g02280 Coffea canephora HOM05D007655 ORTHO05D009698 1.2e-50 204.5 295 52.9
PGR044G0328 Punica granatum HOM05D007655 ORTHO05D009698 5.8e-48 195.7 319 50.5
CiPaw.02G194200 Carya illinoinensis HOM05D007655 ORTHO05D009698 1.3e-47 194.5 307 46.3
Psat1g113880 Pisum sativum HOM05D007655 ORTHO05D009698 3.8e-47 193.0 331 35.6
Nitab4.5_0002701g0030 Nicotiana tabacum HOM05D007655 ORTHO05D009698 2.4e-46 190.3 285 51.9
Hma1.2p1_0523F.1_g172110 Hydrangea macrophylla HOM05D007655 ORTHO05D009698 3.2e-46 189.9 289 51.9
FAN06G4929 Fragaria x ananassa HOM05D007655 ORTHO05D009698 4.2e-46 189.5 331 50.8
FvH4_7g24790 Fragaria vesca HOM05D007655 ORTHO05D009698 2.1e-45 187.2 331 50.8
Atru.chr12.88 Acer truncatum HOM05D007655 ORTHO05D009698 1.0e-44 184.9 331 37.2
Ca_19338_v3 Cicer arietinum L. HOM05D007655 ORTHO05D009698 1.3e-44 184.5 330 40.3
Lalb_Chr03g0033351 Lupinus albus HOM05D007655 ORTHO05D009698 2.3e-44 183.7 320 34.7
CAN.G1161.24 Capsicum annuum HOM05D007655 ORTHO05D009698 3.9e-44 183.0 284 45.8
Cpa.g.sc19.153 Carica papaya HOM05D007655 ORTHO05D009698 3.9e-44 183.0 330 52.1
TPR.G40357 Trifolium pratense HOM05D007655 ORTHO05D009698 5.1e-44 182.6 331 36.0
Actinidia00669 Actinidia chinensis HOM05D007655 ORTHO05D009698 6.6e-44 182.2 303 37.3
Gohir.A06G170600 Gossypium hirsutum HOM05D007655 ORTHO05D009698 8.7e-44 181.8 333 52.0
DCAR_029510 Daucus carota HOM05D007655 ORTHO05D009698 1.1e-43 181.4 287 39.0
Lj2g0024512 Lotus japonicus HOM05D007655 ORTHO05D009698 1.6e-42 177.6 329 46.5
QL08p063505 Quercus lobata HOM05D007655 ORTHO05D009698 1.1e-41 174.9 335 50.7
MSTRG.197 Avicennia marina HOM05D007655 ORTHO05D009698 1.8e-41 174.1 326 34.7
Medtr6g065100 Medicago truncatula HOM05D007655 ORTHO05D009698 6.9e-41 172.2 315 47.9
RcHm_v2.0_Chr1g0370651 Rosa chinensis HOM05D007655 ORTHO05D009698 2.6e-40 170.2 331 50.5
Ca_25253_v3 Cicer arietinum L. HOM05D007655 ORTHO05D009698 5.8e-40 169.1 295 34.6
TWI09G1069 Tripterygium wilfordii HOM05D007655 ORTHO05D009698 5.8e-40 169.1 328 50.9
FAN10G0222 Fragaria x ananassa HOM05D007655 ORTHO05D009698 8.4e-39 165.2 331 46.2
Glyma.09G157400 Glycine max HOM05D007655 ORTHO05D009698 1.4e-38 164.5 331 46.8
Lj1P959T25 Lonicera japonica HOM05D007655 ORTHO05D009698 5.1e-36 156.0 303 49.5
HanXRQChr09g0253251 Helianthus annuus HOM05D007655 ORTHO05D009698 6.7e-36 155.6 311 39.9
Phvul.004G132400 Phaseolus vulgaris HOM05D007655 ORTHO05D009698 3.3e-35 153.3 307 42.3
Aqoxy3G03604 Aquilegia oxysepala HOM05D007655 ORTHO05D009698 4.3e-35 152.9 338 48.5
COL.COLO4_06431 Corchorus olitorius HOM05D007655 ORTHO05D009698 9.6e-35 151.8 330 46.7
VMungo0464G0151 Vigna mungo HOM05D007655 ORTHO05D009698 1.8e-33 147.5 315 46.3
Thecc.10G013100 Theobroma cacao HOM05D007655 ORTHO05D009698 4.0e-33 146.4 334 47.6
TAR131G0001 Trochodendron aralioides HOM05D007655 ORTHO05D009698 6.9e-33 145.6 319 48.3
TAR623G1347 Trochodendron aralioides HOM05D007655 ORTHO05D009698 6.9e-33 145.6 319 48.3
CSS0030670 Camellia sinensis var. sinensis HOM05D007655 ORTHO05D009698 2.0e-32 144.1 187 61.5
Ciclev10033792m.g Citrus clementina HOM05D007655 ORTHO05D000636 3.4e-32 143.3 325 48.9
Sc14g0002050 Simmondsia chinensis HOM05D007655 ORTHO05D009698 4.5e-32 142.9 295 46.8
Nitab4.5_0006468g0020 Nicotiana tabacum HOM05D007655 ORTHO05D009698 8.4e-31 138.7 327 45.9
Solyc03g095960.1 Solanum lycopersicum HOM05D007655 ORTHO05D009698 1.9e-30 137.5 321 44.2
Sopen03g025960 Solanum pennellii HOM05D007655 ORTHO05D009698 5.5e-30 136.0 321 43.6
FAN03G2547 Fragaria x ananassa HOM05D007655 ORTHO05D009698 7.1e-30 135.6 248 53.2
GSVIVG01032781001 Vitis vinifera HOM05D007655 ORTHO05D009698 9.3e-30 135.2 305 49.5
CANSAT56G4119 Cannabis sativa HOM05D007655 ORTHO05D009698 1.6e-29 134.4 289 47.8
Gohir.D06G178400 Gossypium hirsutum HOM05D007655 ORTHO05D009698 4.6e-29 132.9 333 46.2
PGSC0003DMG400027723 Solanum tuberosum HOM05D007655 ORTHO05D009698 4.6e-29 132.9 305 45.6
Migut.F01479 Erythranthe guttata HOM05D007655 ORTHO05D009698 5.1e-28 129.4 284 48.2
Gorai.N006800 Gossypium raimondii HOM05D007655 ORTHO05D009698 6.7e-28 129.0 333 45.9
Rhsim09G0178900 Rhododendron simsii HOM05D007655 ORTHO05D009698 1.5e-27 127.9 307 47.2
Duzib106G0934 Durio zibethinus HOM05D007655 ORTHO05D009698 2.5e-27 127.1 335 46.0
ECA232G4997 Erigeron canadensis HOM05D007655 ORTHO05D009698 2.5e-27 127.1 305 42.6
Sopen03g025950 Solanum pennellii HOM05D007655 ORTHO05D009698 4.8e-26 122.9 311 43.1
vmacro10028 Vaccinium macrocarpon HOM05D007655 ORTHO05D009698 3.1e-25 120.2 302 47.4
arahy.Tifrunner.gnm1.ann1.L8T4NM Arachis hypogaea HOM05D007655 ORTHO05D009698 3.4e-24 116.7 146 43.8
arahy.Tifrunner.gnm1.ann1.P4Y6YZ Arachis hypogaea HOM05D000585 ORTHO05D001841 4.5e-24 116.3 165 41.8
Prupe.2G253200 Prunus persica HOM05D000815 ORTHO05D000636 7.6e-24 115.5 288 41.3
Haze_17251 Corylus avellana HOM05D007655 ORTHO05D009698 3.8e-23 113.2 146 41.1
FAN01G0024 Fragaria x ananassa HOM05D007655 ORTHO05D009698 5.7e-19 99.4 194 55.7
MBI15_g28821_MAGBIO Magnolia biondii HOM05D007655 ORTHO05D009698 5.7e-19 99.4 169 33.1
Oeu029071.1 Olea europaea HOM05D007655 ORTHO05D009698 7.6e-16 89.0 310 43.2
Lsat_1_v5_gn_9_61061 Lactuca sativa HOM05D007655 ORTHO05D009698 1.3e-15 88.2 271 45.0
Peaxi162Scf00304g00006 Petunia axillaris HOM05D007655 ORTHO05D009698 8.5e-15 85.5 292 25.7
SalBow5G5388 Salvia bowleyana HOM05D007655 ORTHO05D009698 2.5e-14 84.0 111 40.5
ATR0030G034 Amborella trichopoda HOM05D007655 ORTHO05D009698 5.5e-14 82.8 149 32.2
Nn2g13207 Nelumbo nucifera HOM05D007655 ORTHO05D009698 7.9e-13 79.0 81 51.9
Lalb_Chr19g0131421 Lupinus albus HOM05D007655 ORTHO05D009698 1.0e-12 78.6 167 29.9
Potri.008G141700 Populus trichocarpa HOM05D007655 ORTHO05D009698 3.9e-12 76.6 176 29.0
ATR0174G045 Amborella trichopoda HOM05D007655 ORTHO05D009698 8.7e-12 75.5 136 30.9
CDE12G0438 Ceratophyllum demersum HOM05D007655 ORTHO05D009698 3.3e-11 73.6 112 38.4
CDE06G0331 Ceratophyllum demersum HOM05D007655 ORTHO05D009698 4.1e-09 66.6 291 35.7
Gohir.D07G184750 Gossypium hirsutum HOM05D007655 ORTHO05D009698 5.9e-08 62.8 103 39.8
Gorai.001G205200 Gossypium raimondii HOM05D007655 ORTHO05D009698 2.2e-07 60.8 99 39.4
CDE04G2579 Ceratophyllum demersum HOM05D007655 ORTHO05D009698 3.8e-07 60.1 98 32.7


User provided reference genes

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