Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p48960 Brassica napus HOM05D007292 ORTHO05D009084 3.6e-80 302.0 208 100.0
BraA09t40351Z Brassica rapa HOM05D007292 ORTHO05D009084 3.6e-80 302.0 208 100.0
C08p31330 Brassica napus HOM05D007292 ORTHO05D009084 2.6e-78 295.8 208 89.9
BolC8t50754H Brassica oleracea HOM05D007292 ORTHO05D009084 6.3e-77 291.2 209 91.9
BcaB01g00041 Brassica carinata HOM05D007292 ORTHO05D009084 1.9e-73 279.6 209 76.1
Sp5g06520 Schrenkiella parvula HOM05D007292 ORTHO05D009084 7.5e-70 267.7 211 71.6
Thhalv10006239m.g Eutrema salsugineum HOM05D007292 ORTHO05D009084 2.3e-66 256.1 211 68.7
BraA04t16126Z Brassica rapa HOM05D007292 ORTHO05D009084 8.6e-66 254.2 208 69.7
BcaC02g09799 Brassica carinata HOM05D007292 ORTHO05D009084 2.1e-64 249.6 208 67.8
C04p36460 Brassica napus HOM05D007292 ORTHO05D009084 3.6e-64 248.8 208 67.8
BolC4t25149H Brassica oleracea HOM05D007292 ORTHO05D009084 3.6e-64 248.8 208 67.8
A04p04080 Brassica napus HOM05D007292 ORTHO05D009084 8.0e-64 247.7 208 71.2
CARHR166090 Cardamine hirsuta HOM05D007292 ORTHO05D009084 1.3e-58 230.3 207 63.3
Carub.0005s2275 Capsella rubella HOM05D007292 ORTHO05D009084 2.8e-56 222.6 210 61.4
AL5G37290 Arabidopsis lyrata HOM05D007292 ORTHO05D009084 3.6e-56 222.2 206 61.7
AT3G56010 Arabidopsis thaliana HOM05D007292 ORTHO05D009084 5.2e-55 218.4 210 60.0
Aa31LG10G10950 Aethionema arabicum HOM05D007292 ORTHO05D009084 4.1e-52 208.8 116 91.4
THA.LOC104824327 Tarenaya hassleriana HOM05D007292 ORTHO05D009084 7.3e-41 171.4 213 50.2
THA.LOC104811239 Tarenaya hassleriana HOM05D007292 ORTHO05D009084 1.6e-40 170.2 209 49.3
Eucgr.J00191 Eucalyptus grandis HOM05D007292 ORTHO05D009084 2.0e-38 163.3 114 74.6
Manes.07G131600 Manihot esculenta HOM05D007292 ORTHO05D009084 2.6e-38 162.9 116 73.3
Cc08_g07220 Coffea canephora HOM05D007292 ORTHO05D009084 7.5e-38 161.4 114 72.8
EL10Ac2g04856 Beta vulgaris HOM05D007292 ORTHO05D009084 4.9e-37 158.7 117 70.1
GSVIVG01032790001 Vitis vinifera HOM05D007292 ORTHO05D009084 4.9e-37 158.7 114 71.1
Ah.16g103670 Amaranthus hybridus HOM05D007292 ORTHO05D009084 6.4e-37 158.3 114 71.1
Cfa001300 Carpinus fangiana HOM05D007292 ORTHO05D009084 8.3e-37 157.9 114 69.3
Haze_17244 Corylus avellana HOM05D004762 ORTHO05D005972 1.1e-36 157.5 114 69.3
Hund13879 Selenicereus undatus HOM05D007292 ORTHO05D009084 1.1e-36 157.5 114 70.2
TWI53G0916 Tripterygium wilfordii HOM05D007292 ORTHO05D009084 1.1e-36 157.5 114 70.2
TAR633G2478 Trochodendron aralioides HOM05D007292 ORTHO05D009084 1.1e-36 157.5 116 69.8
Actinidia00958 Actinidia chinensis HOM05D007292 ORTHO05D009084 1.4e-36 157.1 114 69.3
Actinidia13950 Actinidia chinensis HOM05D007292 ORTHO05D009084 1.4e-36 157.1 114 69.3
PGR044G1044 Punica granatum HOM05D007292 ORTHO05D009084 1.9e-36 156.8 114 69.3
Dinv10605 Davidia involucrata HOM05D007292 ORTHO05D009084 3.2e-36 156.0 116 69.0
Nitab4.5_0002701g0020 Nicotiana tabacum HOM05D007292 ORTHO05D009084 3.2e-36 156.0 116 65.5
Ciclev10032544m.g Citrus clementina HOM05D007292 ORTHO05D009084 4.1e-36 155.6 116 70.7
SalBow5G0252 Salvia bowleyana HOM05D007292 ORTHO05D009084 4.1e-36 155.6 116 69.0
Solyc03g095990.1 Solanum lycopersicum HOM05D007292 ORTHO05D009084 4.1e-36 155.6 114 69.3
Sopen03g026090 Solanum pennellii HOM05D007292 ORTHO05D009084 4.1e-36 155.6 114 69.3
PGSC0003DMG400027726 Solanum tuberosum HOM05D007292 ORTHO05D009084 4.1e-36 155.6 114 69.3
BcaB02g08388 Brassica carinata HOM05D007292 ORTHO05D009084 5.4e-36 155.2 85 92.9
Thecc.10G013900 Theobroma cacao HOM05D007292 ORTHO05D009084 5.4e-36 155.2 116 67.2
Nitab4.5_0000487g0050 Nicotiana tabacum HOM05D007292 ORTHO05D009084 9.2e-36 154.5 116 65.5
SalBow5G4600 Salvia bowleyana HOM05D007292 ORTHO05D009084 9.2e-36 154.5 116 68.1
Duzib114G0074 Durio zibethinus HOM05D007292 ORTHO05D009084 1.2e-35 154.1 116 66.4
Lalb_Chr08g0231651 Lupinus albus HOM05D007292 ORTHO05D009084 2.7e-35 152.9 114 68.4
AUR62022909 Chenopodium quinoa HOM05D007292 ORTHO05D009084 4.6e-35 152.1 114 67.5
Prupe.2G252500 Prunus persica HOM05D007292 ORTHO05D009084 4.6e-35 152.1 117 65.8
DCAR_011829 Daucus carota HOM05D007292 ORTHO05D009084 6.0e-35 151.8 112 71.4
Migut.F01485 Erythranthe guttata HOM05D007292 ORTHO05D009084 7.8e-35 151.4 114 66.7
Aqoxy6G01833 Aquilegia oxysepala HOM05D007292 ORTHO05D009084 1.0e-34 151.0 118 65.3
CiPaw.01G300300 Carya illinoinensis HOM05D007292 ORTHO05D009084 1.0e-34 151.0 114 66.7
MELO3C018364.2 Cucumis melo HOM05D007292 ORTHO05D009084 1.0e-34 151.0 116 67.2
TWI09G0172 Tripterygium wilfordii HOM05D007292 ORTHO05D009084 1.0e-34 151.0 114 69.3
MD01G1154900 Malus domestica HOM05D007292 ORTHO05D009084 1.3e-34 150.6 117 65.0
ATR0681G254 Amborella trichopoda HOM05D007292 ORTHO05D009084 2.3e-34 149.8 115 66.1
arahy.Tifrunner.gnm1.ann1.W7USAB Arachis hypogaea HOM05D007292 ORTHO05D009084 2.3e-34 149.8 114 68.4
Cpa.g.sc19.157 Carica papaya HOM05D007292 ORTHO05D009084 2.3e-34 149.8 116 66.4
vmacro10031 Vaccinium macrocarpon HOM05D007292 ORTHO05D009084 3.9e-34 149.1 116 68.1
Potri.010G186800 Populus trichocarpa HOM05D007292 ORTHO05D009084 5.1e-34 148.7 114 64.9
Peaxi162Scf00484g00003 Petunia axillaris HOM05D007292 ORTHO05D009084 6.6e-34 148.3 114 64.0
Sc10g0002470 Simmondsia chinensis HOM05D007292 ORTHO05D009084 6.6e-34 148.3 116 62.9
CANSAT56G1912 Cannabis sativa HOM05D007292 ORTHO05D009084 8.6e-34 147.9 116 67.2
arahy.Tifrunner.gnm1.ann1.RI3S0A Arachis hypogaea HOM05D007292 ORTHO05D009084 1.1e-33 147.5 114 67.5
Sed0024586 Sechium edule HOM05D007292 ORTHO05D009084 1.9e-33 146.7 114 67.5
Gohir.A05G330800 Gossypium hirsutum HOM05D007292 ORTHO05D009084 2.5e-33 146.4 116 65.5
Hma1.2p1_0145F.1_g065370 Hydrangea macrophylla HOM05D007292 ORTHO05D009084 2.5e-33 146.4 107 71.0
Hma1.2p1_2705F.1_g327175 Hydrangea macrophylla HOM05D007292 ORTHO05D009084 2.5e-33 146.4 107 71.0
Lj6g0005846 Lotus japonicus HOM05D007292 ORTHO05D009084 2.5e-33 146.4 109 67.9
MD07G1224000 Malus domestica HOM05D007292 ORTHO05D009084 2.5e-33 146.4 119 63.0
QL08p063404 Quercus lobata HOM05D007292 ORTHO05D009084 2.5e-33 146.4 114 64.0
CSS0010989 Camellia sinensis var. sinensis HOM05D007292 ORTHO05D009084 3.3e-33 146.0 115 66.1
Gorai.012G078000 Gossypium raimondii HOM05D007292 ORTHO05D009084 4.3e-33 145.6 116 65.5
RcHm_v2.0_Chr1g0370551 Rosa chinensis HOM05D007292 ORTHO05D009084 5.6e-33 145.2 118 65.3
FAN10G1098 Fragaria x ananassa HOM05D007292 ORTHO05D009084 1.6e-32 143.7 118 65.3
Gohir.D04G069400 Gossypium hirsutum HOM05D007292 ORTHO05D009084 1.6e-32 143.7 116 64.7
FvH4_7g24710 Fragaria vesca HOM05D007292 ORTHO05D009084 2.1e-32 143.3 118 65.3
FAN01G0766 Fragaria x ananassa HOM05D007292 ORTHO05D009084 2.1e-32 143.3 118 65.3
FAN03G0495 Fragaria x ananassa HOM05D004762 ORTHO05D005972 2.1e-32 143.3 118 65.3
FAN06G1000 Fragaria x ananassa HOM05D007292 ORTHO05D009084 2.1e-32 143.3 118 65.3
CsaV3_5G010290 Cucumis sativus L. HOM05D007292 ORTHO05D009084 2.8e-32 142.9 114 65.8
Rhsim09G0178500 Rhododendron simsii HOM05D007292 ORTHO05D009084 2.8e-32 142.9 114 66.7
Potri.008G070700 Populus trichocarpa HOM05D007292 ORTHO05D009084 4.7e-32 142.1 114 62.3
Atru.chr12.94 Acer truncatum HOM05D007292 ORTHO05D009084 1.1e-31 141.0 114 68.4
ClCG07G004350 Citrullus lanatus HOM05D007292 ORTHO05D009084 5.2e-31 138.7 108 67.6
Glyma.11G231200 Glycine max HOM05D007292 ORTHO05D009084 8.9e-31 137.9 117 63.2
HanXRQChr14g0459531 Helianthus annuus HOM05D007292 ORTHO05D009084 8.9e-31 137.9 117 60.7
Lsat_1_v5_gn_2_124081 Lactuca sativa HOM05D007292 ORTHO05D009084 1.2e-30 137.5 118 62.7
PSO384G0417 Papaver somniferum HOM05D007292 ORTHO05D009084 1.2e-30 137.5 118 61.0
Medtr3g070960 Medicago truncatula HOM05D007292 ORTHO05D009084 4.4e-30 135.6 114 61.4
Sabra08G0052000 Salix brachista HOM05D007292 ORTHO05D009084 7.6e-30 134.8 114 60.5
Glyma.18G025900 Glycine max HOM05D007292 ORTHO05D009084 2.2e-29 133.3 117 62.4
TPR.G11203 Trifolium pratense HOM05D007292 ORTHO05D009084 1.4e-28 130.6 116 58.6
Zm00001eb013500 Zea mays HOM05D007292 ORTHO05D009084 2.4e-28 129.8 127 54.3
Psat5g129440 Pisum sativum HOM05D007292 ORTHO05D009084 3.2e-28 129.4 119 58.8
Os03g0293100 Oryza sativa ssp. japonica HOM05D007292 ORTHO05D009084 4.2e-28 129.0 133 55.6
ECA238G0254 Erigeron canadensis HOM05D007292 ORTHO05D009084 5.4e-28 128.6 116 61.2
VMungo1383G3483 Vigna mungo HOM05D001399 ORTHO05D001670 2.1e-27 126.7 116 59.5
Phvul.001G244400 Phaseolus vulgaris HOM05D007292 ORTHO05D009084 7.8e-27 124.8 117 58.1
Hma1.2p1_2705F.1_g327170 Hydrangea macrophylla HOM05D001399 ORTHO05D001670 1.3e-26 124.0 96 69.8
TAR636G1797 Trochodendron aralioides HOM05D007292 ORTHO05D009084 1.5e-25 120.6 114 58.8
Ca_15135_v3 Cicer arietinum L. HOM05D007292 ORTHO05D009084 2.8e-24 116.3 116 54.3
COL.COLO4_25767 Corchorus olitorius HOM05D004762 ORTHO05D005972 1.6e-19 100.5 81 64.2
Nn2g13181 Nelumbo nucifera HOM05D007292 ORTHO05D009084 2.1e-19 100.1 93 54.8
SGA_v2.0_scaffold378G50330 Striga asiatica HOM05D007292 ORTHO05D009084 3.5e-19 99.4 80 66.2
Sabra10G0144000 Salix brachista HOM05D007292 ORTHO05D009084 2.3e-18 96.7 79 64.6
SEGI_20884 Sequoiadendron giganteum HOM05D007292 ORTHO05D009084 1.1e-15 87.8 111 45.0
CDE04G1468 Ceratophyllum demersum HOM05D000652 ORTHO05D009084 9.9e-14 81.3 76 57.9
AagrBONN_evm.TU.Sc2ySwM_344.666 Anthoceros agrestis HOM05D007292 ORTHO05D009084 2.0e-06 57.0 98 36.7


User provided reference genes

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