Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p48440 Brassica napus HOM05D000051 ORTHO05D041542 1.8e-56 222.2 105 100.0
BraA09t40296Z Brassica rapa HOM05D000051 ORTHO05D041542 1.8e-56 222.2 105 100.0
BcaB01g00095 Brassica carinata HOM05D000051 ORTHO05D000015 3.5e-23 111.7 65 83.1
Sp6g18230 Schrenkiella parvula HOM05D000051 ORTHO05D000015 2.2e-22 109.0 64 78.1
Carub.0005s2152 Capsella rubella HOM05D000051 ORTHO05D000015 5.0e-22 107.8 65 76.9
Sp5g07520 Schrenkiella parvula HOM05D000051 ORTHO05D000015 5.0e-22 107.8 62 80.6
BolC8t50692H Brassica oleracea HOM05D000051 ORTHO05D000015 3.2e-21 105.1 64 75.0
BcaC07g39767 Brassica carinata HOM05D000051 ORTHO05D000015 1.6e-20 102.8 60 80.0
BcaB03g15635 Brassica carinata HOM05D000051 ORTHO05D000015 2.1e-20 102.4 65 75.4
BcaB01g00146 Brassica carinata HOM05D000051 ORTHO05D000015 2.7e-20 102.1 64 76.6
BcaB01g00144 Brassica carinata HOM05D000051 ORTHO05D000015 4.7e-20 101.3 75 62.7
A09p47860 Brassica napus HOM05D000051 ORTHO05D000015 4.7e-20 101.3 60 80.0
Thhalv10015524m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 4.7e-20 101.3 63 76.2
BolC8t50693H Brassica oleracea HOM05D000051 ORTHO05D000015 8.0e-20 100.5 67 73.1
BcaC07g39872 Brassica carinata HOM05D000051 ORTHO05D000015 1.0e-19 100.1 67 73.1
C08p30770 Brassica napus HOM05D000051 ORTHO05D000015 1.0e-19 100.1 67 73.1
BolC8t50619H Brassica oleracea HOM05D000051 ORTHO05D000015 1.0e-19 100.1 64 78.1
BcaB01g00145 Brassica carinata HOM05D000051 ORTHO05D000015 1.4e-19 99.8 66 75.8
BcaB01g00147 Brassica carinata HOM05D000051 ORTHO05D000015 2.3e-19 99.0 64 71.9
AT3G54910 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 3.0e-19 98.6 65 69.2
CARHR164880 Cardamine hirsuta HOM05D000051 ORTHO05D000015 4.0e-19 98.2 66 74.2
A09p47900 Brassica napus HOM05D000051 ORTHO05D000015 6.8e-19 97.4 64 73.4
BcaB01g00094 Brassica carinata HOM05D000051 ORTHO05D000015 1.2e-18 96.7 66 72.7
C08p30100 Brassica napus HOM05D000051 ORTHO05D000015 1.2e-18 96.7 64 76.6
A09p48470 Brassica napus HOM05D000051 ORTHO05D000015 2.0e-18 95.9 67 71.6
BraA09t40299Z Brassica rapa HOM05D000051 ORTHO05D000015 2.0e-18 95.9 67 71.6
A09p48430 Brassica napus HOM05D000051 ORTHO05D000015 5.7e-18 94.4 65 69.2
BolC8t50691H Brassica oleracea HOM05D000051 ORTHO05D000015 5.7e-18 94.4 65 69.2
Thhalv10010416m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 9.8e-18 93.6 64 70.3
AL5G36020 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.3e-17 93.2 64 70.3
C08p30140 Brassica napus HOM05D000051 ORTHO05D000015 2.8e-17 92.0 64 70.3
C08p30110 Brassica napus HOM05D000051 ORTHO05D000015 3.7e-17 91.7 78 61.5
A09p47880 Brassica napus HOM05D000051 ORTHO05D000015 6.3e-17 90.9 61 70.5
BraA09t40242Z Brassica rapa HOM05D000051 ORTHO05D000015 1.4e-16 89.7 66 63.6
BraA09t40295Z Brassica rapa HOM05D000051 ORTHO05D000015 1.4e-16 89.7 69 65.2
Sp7g03360 Schrenkiella parvula HOM05D000051 ORTHO05D000015 3.1e-16 88.6 87 54.0
A09p47850 Brassica napus HOM05D000051 ORTHO05D000015 7.0e-16 87.4 65 67.7
BraA10t43469Z Brassica rapa HOM05D000051 ORTHO05D000015 7.0e-16 87.4 63 63.5
BcaC04g21569 Brassica carinata HOM05D000051 ORTHO05D000015 9.1e-16 87.0 63 61.9
C09p30290 Brassica napus HOM05D000051 ORTHO05D000015 9.1e-16 87.0 63 61.9
C09p47880 Brassica napus HOM05D000051 ORTHO05D000015 9.1e-16 87.0 63 61.9
BolC9t57626H Brassica oleracea HOM05D000051 ORTHO05D000015 9.1e-16 87.0 63 61.9
BraA09t40244Z Brassica rapa HOM05D000051 ORTHO05D000015 1.2e-15 86.7 70 62.9
A10p13730 Brassica napus HOM05D000051 ORTHO05D000015 2.0e-15 85.9 63 61.9
C08p30750 Brassica napus HOM05D000051 ORTHO05D000015 2.7e-15 85.5 65 69.2
BcaB01g00090 Brassica carinata HOM05D000051 ORTHO05D000015 3.5e-15 85.1 65 66.2
BolC9t55892H Brassica oleracea HOM05D000051 ORTHO05D000015 5.9e-15 84.3 63 60.3
BcaC07g39868 Brassica carinata HOM05D000051 ORTHO05D000015 1.7e-14 82.8 65 69.2
AT4G10420 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 2.9e-14 82.0 74 55.4
BcaC07g39873 Brassica carinata HOM05D000051 ORTHO05D000015 3.8e-14 81.6 65 66.2
BolC8t50700H Brassica oleracea HOM05D000051 ORTHO05D000015 3.8e-14 81.6 65 66.2
AL8G40480 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 8.5e-14 80.5 56 69.6
AT4G10410 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 1.5e-13 79.7 62 62.9
Carub.0007s3726 Capsella rubella HOM05D000051 ORTHO05D000015 1.5e-13 79.7 66 62.1
BcaB07g29686 Brassica carinata HOM05D000051 ORTHO05D000015 1.9e-13 79.3 76 56.6
BcaB01g00731 Brassica carinata HOM05D000051 ORTHO05D000015 3.2e-13 78.6 48 79.2
Thhalv10019567m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 3.2e-13 78.6 65 60.0
AT4G10400 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 5.5e-13 77.8 63 63.5
AL6G44370 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 9.5e-13 77.0 65 56.9
AL7G51940 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.6e-12 76.3 69 53.6
CARHR277270 Cardamine hirsuta HOM05D000051 ORTHO05D000015 1.6e-12 76.3 64 59.4
Thhalv10004309m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 2.1e-12 75.9 64 54.7
Sp7g03470 Schrenkiella parvula HOM05D000051 ORTHO05D000015 4.7e-12 74.7 75 52.0
Sp7g04110 Schrenkiella parvula HOM05D000051 ORTHO05D000015 8.0e-12 73.9 67 53.7
Sp1g38380 Schrenkiella parvula HOM05D000051 ORTHO05D000015 1.0e-11 73.6 60 56.7
AL7G52020 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.8e-11 72.8 69 56.5
C03p23470 Brassica napus HOM05D000051 ORTHO05D000015 5.2e-11 71.2 65 52.3
Thhalv10027772m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 6.8e-11 70.9 65 58.5
AL6G44360 Arabidopsis lyrata HOM05D003230 ORTHO05D003680 1.5e-10 69.7 67 55.2
CARHR256230 Cardamine hirsuta HOM05D000051 ORTHO05D000015 2.0e-10 69.3 72 48.6
AL7G52000 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 2.6e-10 68.9 68 52.9
A03p20020 Brassica napus HOM05D000051 ORTHO05D000015 2.6e-10 68.9 61 54.1
BolC6t36490H Brassica oleracea HOM05D001194 ORTHO05D000015 2.6e-10 68.9 89 40.4
BolC8t50694H Brassica oleracea HOM05D000051 ORTHO05D000015 3.4e-10 68.6 49 67.3
Thhalv10028332m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 3.4e-10 68.6 64 59.4
CARHR277260 Cardamine hirsuta HOM05D000051 ORTHO05D000015 4.4e-10 68.2 64 50.0
Thhalv10027812m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 5.7e-10 67.8 63 55.6
AT5G38590 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 7.5e-10 67.4 62 58.1
BcaC02g11877 Brassica carinata HOM05D000051 ORTHO05D000015 7.5e-10 67.4 69 44.9
BraA05t20843Z Brassica rapa HOM05D000051 ORTHO05D000015 7.5e-10 67.4 91 37.4
Thhalv10027767m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 9.8e-10 67.0 67 52.2
BcaB04g18622 Brassica carinata HOM05D000051 ORTHO05D000015 1.3e-09 66.6 60 50.0
BcaB05g22266 Brassica carinata HOM05D000051 ORTHO05D000015 1.3e-09 66.6 60 55.0
BolC3t14743H Brassica oleracea HOM05D000051 ORTHO05D000015 1.3e-09 66.6 65 49.2
Carub.0006s2905 Capsella rubella HOM05D000051 ORTHO05D000015 1.3e-09 66.6 66 56.1
Thhalv10028223m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 1.7e-09 66.2 63 57.1
C05p32890 Brassica napus HOM05D000051 ORTHO05D000015 2.8e-09 65.5 59 50.8
BolC5t32021H Brassica oleracea HOM05D000051 ORTHO05D000015 2.8e-09 65.5 59 50.8
Thhalv10018645m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 2.8e-09 65.5 55 60.0
Thhalv10028222m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 2.8e-09 65.5 58 56.9
SpUn0035_0040 Schrenkiella parvula HOM05D000051 ORTHO05D000015 2.8e-09 65.5 63 57.1
Carub.0007s3733 Capsella rubella HOM05D000051 ORTHO05D000015 3.7e-09 65.1 67 55.2
CARHR213990 Cardamine hirsuta HOM05D000051 ORTHO05D000015 3.7e-09 65.1 51 58.8
CARHR214030 Cardamine hirsuta HOM05D000051 ORTHO05D000015 3.7e-09 65.1 49 67.3
A04p11510 Brassica napus HOM05D000051 ORTHO05D000015 4.9e-09 64.7 65 55.4
CARHR214020 Cardamine hirsuta HOM05D000051 ORTHO05D000015 6.3e-09 64.3 65 55.4
Thhalv10028269m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 6.3e-09 64.3 64 54.7
C03p90290 Brassica napus HOM05D000051 ORTHO05D000015 1.1e-08 63.5 72 48.6
BolC3t21351H Brassica oleracea HOM05D000051 ORTHO05D000015 1.1e-08 63.5 72 48.6
BcaC08g43935 Brassica carinata HOM05D000051 ORTHO05D000015 1.4e-08 63.2 58 51.7
C06p13300 Brassica napus HOM05D001194 ORTHO05D005580 1.4e-08 63.2 58 51.7
BraA03t11253Z Brassica rapa HOM05D000051 ORTHO05D000015 1.4e-08 63.2 65 49.2
BraA04t16816Z Brassica rapa HOM05D000051 ORTHO05D000015 1.4e-08 63.2 74 51.4
Thhalv10019578m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 1.4e-08 63.2 67 49.3
AT5G56420 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 2.4e-08 62.4 60 53.3
Thhalv10027789m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 2.4e-08 62.4 67 53.7
AL8G32140 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 3.1e-08 62.0 60 53.3
AT5G38565 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 3.1e-08 62.0 42 66.7
BcaB05g22267 Brassica carinata HOM05D000051 ORTHO05D000015 5.4e-08 61.2 60 51.7
BraA08t32292Z Brassica rapa HOM05D000051 ORTHO05D000015 5.4e-08 61.2 56 57.1
Sp6g18240 Schrenkiella parvula HOM05D000051 ORTHO05D000015 5.4e-08 61.2 60 51.7
Sp7g03370 Schrenkiella parvula HOM05D000051 ORTHO05D000015 5.4e-08 61.2 67 47.8
CARHR221750 Cardamine hirsuta HOM05D000051 ORTHO05D000015 7.0e-08 60.8 88 43.2
AT5G38570 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 9.2e-08 60.5 67 52.2
A02p09110 Brassica napus HOM05D000051 ORTHO05D000015 9.2e-08 60.5 60 51.7
CARHR214010 Cardamine hirsuta HOM05D000051 ORTHO05D000015 9.2e-08 60.5 51 54.9
BcaC03g14224 Brassica carinata HOM05D000051 ORTHO05D000015 1.2e-07 60.1 60 51.7
CARHR269990 Cardamine hirsuta HOM05D000051 ORTHO05D000015 1.2e-07 60.1 60 50.0
BolC4t26105H Brassica oleracea HOM05D000051 ORTHO05D000015 1.6e-07 59.7 70 51.4
AT5G56400 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 2.0e-07 59.3 68 45.6
BolC3t14447H Brassica oleracea HOM05D000051 ORTHO05D000015 2.0e-07 59.3 68 51.5
AL8G32130 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 2.7e-07 58.9 68 47.1
BcaB08g37448 Brassica carinata HOM05D000051 ORTHO05D000015 3.5e-07 58.5 68 48.5
C02p15270 Brassica napus HOM05D000051 ORTHO05D000015 3.5e-07 58.5 60 51.7
BolC2t07644H Brassica oleracea HOM05D000051 ORTHO05D000015 3.5e-07 58.5 60 51.7
Thhalv10018628m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 3.5e-07 58.5 55 54.5
Aa31LG3G12320 Aethionema arabicum HOM05D000051 ORTHO05D000015 4.5e-07 58.2 60 48.3
BcaC01g05947 Brassica carinata HOM05D000051 ORTHO05D000015 4.5e-07 58.2 68 50.0
C03p20760 Brassica napus HOM05D000051 ORTHO05D000015 4.5e-07 58.2 68 50.0
BraA02t05979Z Brassica rapa HOM05D000051 ORTHO05D000015 4.5e-07 58.2 60 51.7
Carub.0008s1689 Capsella rubella HOM05D000051 ORTHO05D000015 4.5e-07 58.2 60 50.0
Thhalv10028128m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 5.9e-07 57.8 47 61.7
BolC8t50698H Brassica oleracea HOM05D000051 ORTHO05D000015 7.7e-07 57.4 47 66.0
C02p62720 Brassica napus HOM05D000051 ORTHO05D000015 1.7e-06 56.2 80 43.8
Carub.0007s3729 Capsella rubella HOM05D000051 ORTHO05D000015 1.7e-06 56.2 66 43.9
AL7G51960 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 2.3e-06 55.8 46 60.9
Carub.0007s3777 Capsella rubella HOM05D000051 ORTHO05D000015 2.3e-06 55.8 66 43.9
Thhalv10013652m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 2.3e-06 55.8 60 46.7
Thhalv10028666m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 2.9e-06 55.5 58 56.9
BcaC02g09658 Brassica carinata HOM05D000051 ORTHO05D000015 3.8e-06 55.1 75 46.7
AT4G26340 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 5.0e-06 54.7 57 43.9
BcaB02g11223 Brassica carinata HOM05D000051 ORTHO05D000015 5.0e-06 54.7 74 40.5
A02p42720 Brassica napus HOM05D000051 ORTHO05D000015 5.0e-06 54.7 77 44.2
Thhalv10027746m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 6.6e-06 54.3 72 43.1
Thhalv10028237m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 6.6e-06 54.3 47 57.4
AL493U10020 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 8.6e-06 53.9 61 44.3
BcaC03g18204 Brassica carinata HOM05D000051 ORTHO05D000015 8.6e-06 53.9 65 50.8


User provided reference genes

Program Settings