Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p47560 Brassica napus HOM05D005044 ORTHO05D020187 3.4e-32 141.0 67 100.0
BraA09t40212Z Brassica rapa HOM05D005044 ORTHO05D006799 1.0e-28 129.4 61 100.0
A02p37520 Brassica napus HOM05D005044 ORTHO05D020187 9.0e-25 116.3 56 98.2
BcaB01g00175 Brassica carinata HOM05D005044 ORTHO05D006799 3.9e-20 100.9 47 100.0
BcaB02g08448 Brassica carinata HOM05D005044 ORTHO05D006799 8.7e-20 99.8 47 97.9
Sp5g07850 Schrenkiella parvula HOM05D005044 ORTHO05D006799 8.7e-20 99.8 47 97.9
BcaC02g09057 Brassica carinata HOM05D005044 ORTHO05D006799 2.5e-19 98.2 47 95.7
A04p05210 Brassica napus HOM05D005044 ORTHO05D006799 2.5e-19 98.2 47 95.7
C04p37940 Brassica napus HOM05D005044 ORTHO05D006799 2.5e-19 98.2 47 95.7
BolC4t25370H Brassica oleracea HOM05D005044 ORTHO05D006799 2.5e-19 98.2 47 95.7
BraA04t16230Z Brassica rapa HOM05D005044 ORTHO05D006799 2.5e-19 98.2 47 95.7
AL5G35690 Arabidopsis lyrata HOM05D005044 ORTHO05D006799 3.3e-19 97.8 47 95.7
AT3G54610 Arabidopsis thaliana HOM05D005044 ORTHO05D006799 3.3e-19 97.8 47 95.7
Carub.0005s2121 Capsella rubella HOM05D005044 ORTHO05D006799 3.3e-19 97.8 47 95.7
BolC4t25361H Brassica oleracea HOM05D005044 ORTHO05D006799 7.4e-19 96.7 47 91.5
BcaC02g09052 Brassica carinata HOM05D005044 ORTHO05D006799 2.1e-18 95.1 47 89.4
Thhalv10010247m.g Eutrema salsugineum HOM05D005044 ORTHO05D006799 2.1e-18 95.1 48 95.8
C04p37870 Brassica napus HOM05D005044 ORTHO05D006799 3.6e-18 94.4 47 89.4
A04p05170 Brassica napus HOM05D005044 ORTHO05D006799 4.8e-18 94.0 47 87.2
BraA04t16227Z Brassica rapa HOM05D005044 ORTHO05D006799 4.8e-18 94.0 47 87.2
Aa31sc64G50 Aethionema arabicum HOM05D005044 ORTHO05D006799 1.8e-17 92.0 47 87.2
FAN27G2477 Fragaria x ananassa HOM05D005044 ORTHO05D006799 6.9e-17 90.1 67 65.7
THA.LOC104804692 Tarenaya hassleriana HOM05D005044 ORTHO05D006799 9.0e-17 89.7 47 85.1
Migut.N02179 Erythranthe guttata HOM05D005044 ORTHO05D006799 2.0e-16 88.6 55 72.7
SGA_v2.0_scaffold80G25918 Striga asiatica HOM05D005044 ORTHO05D006799 2.0e-16 88.6 55 72.7
Nitab4.5_0000393g0090 Nicotiana tabacum HOM05D005044 ORTHO05D020187 3.4e-16 87.8 50 82.0
Sc05g0001060 Simmondsia chinensis HOM05D005044 ORTHO05D006799 3.4e-16 87.8 47 83.0
vmacro14878 Vaccinium macrocarpon HOM05D005044 ORTHO05D006799 3.4e-16 87.8 70 62.9
Duzib133G0403 Durio zibethinus HOM05D005044 ORTHO05D006799 5.8e-16 87.0 47 83.0
Hund09563 Selenicereus undatus HOM05D005044 ORTHO05D006799 5.8e-16 87.0 55 72.7
FAN20G1248 Fragaria x ananassa HOM05D005044 ORTHO05D006799 7.6e-16 86.7 47 83.0
Gohir.A11G127000 Gossypium hirsutum HOM05D005044 ORTHO05D006799 7.6e-16 86.7 47 83.0
Gorai.007G141400 Gossypium raimondii HOM05D005044 ORTHO05D006799 7.6e-16 86.7 47 83.0
Manes.05G083800 Manihot esculenta HOM05D005044 ORTHO05D006799 7.6e-16 86.7 47 83.0
RcHm_v2.0_Chr6g0289651 Rosa chinensis HOM05D005044 ORTHO05D006799 7.6e-16 86.7 47 83.0
Sabra05G0166600 Salix brachista HOM05D005044 ORTHO05D006799 7.6e-16 86.7 57 68.4
Prupe.8G232900 Prunus persica HOM05D005044 ORTHO05D006799 9.9e-16 86.3 47 83.0
CDE07G1918 Ceratophyllum demersum HOM05D005044 ORTHO05D006799 1.3e-15 85.9 47 80.9
Cpa.g.sc52.102 Carica papaya HOM05D005044 ORTHO05D006799 1.7e-15 85.5 47 80.9
MD10G1193500 Malus domestica HOM05D005044 ORTHO05D006799 1.7e-15 85.5 47 80.9
Rhsim13G0030500 Rhododendron simsii HOM05D005044 ORTHO05D006799 1.7e-15 85.5 47 80.9
Oeu018178.1 Olea europaea HOM05D005044 ORTHO05D006799 2.2e-15 85.1 47 78.7
Lalb_Chr01g0019911 Lupinus albus HOM05D005044 ORTHO05D006799 2.9e-15 84.7 47 78.7
Lalb_Chr25g0290121 Lupinus albus HOM05D005044 ORTHO05D006799 2.9e-15 84.7 47 78.7
Os10g0415900 Oryza sativa ssp. japonica HOM05D005044 ORTHO05D006799 2.9e-15 84.7 47 78.7
TWI75G1122 Tripterygium wilfordii HOM05D005044 ORTHO05D006799 2.9e-15 84.7 47 76.6
Actinidia24932 Actinidia chinensis HOM05D005044 ORTHO05D006799 3.8e-15 84.3 48 77.1
Cc01_g18890 Coffea canephora HOM05D005044 ORTHO05D006799 3.8e-15 84.3 47 85.1
Lj1A57T46 Lonicera japonica HOM05D005044 ORTHO05D006799 3.8e-15 84.3 50 76.0
Rhsim01G0270400 Rhododendron simsii HOM05D005044 ORTHO05D006799 3.8e-15 84.3 58 69.0
Thecc.01G268500 Theobroma cacao HOM05D005044 ORTHO05D006799 3.8e-15 84.3 45 82.2
unitig_22.g5954 Utricularia gibba HOM05D005044 ORTHO05D006799 3.8e-15 84.3 47 78.7
GSVIVG01000713001 Vitis vinifera HOM05D005044 ORTHO05D006799 3.8e-15 84.3 47 78.7
Actinidia30711 Actinidia chinensis HOM05D005044 ORTHO05D006799 4.9e-15 84.0 55 69.1
Ciclev10019527m.g Citrus clementina HOM05D005044 ORTHO05D006799 4.9e-15 84.0 47 78.7
Dinv22487 Davidia involucrata HOM05D005044 ORTHO05D006799 4.9e-15 84.0 47 78.7
Glyma.03G158300 Glycine max HOM05D005044 ORTHO05D006799 4.9e-15 84.0 47 78.7
Glyma.19G160700 Glycine max HOM05D005044 ORTHO05D006799 4.9e-15 84.0 47 78.7
PGR044G0510 Punica granatum HOM05D005044 ORTHO05D006799 4.9e-15 84.0 47 78.7
TWI12G0479 Tripterygium wilfordii HOM05D005044 ORTHO05D006799 4.9e-15 84.0 47 74.5
Ah.11g050040 Amaranthus hybridus HOM05D005044 ORTHO05D006799 6.4e-15 83.6 54 70.4
HanXRQChr10g0281481 Helianthus annuus HOM05D005044 ORTHO05D006799 6.4e-15 83.6 47 76.6
Psat3g061080 Pisum sativum HOM05D005044 ORTHO05D006799 6.4e-15 83.6 47 78.7
ClCG01G025700 Citrullus lanatus HOM05D005044 ORTHO05D006799 8.4e-15 83.2 47 78.7
Lj1g0021498 Lotus japonicus HOM05D005044 ORTHO05D006799 8.4e-15 83.2 47 78.7
Sed0025057 Sechium edule HOM05D005044 ORTHO05D006799 8.4e-15 83.2 47 78.7
GSVIVG01000712001 Vitis vinifera HOM05D005044 ORTHO05D006799 8.4e-15 83.2 47 76.6
Zm00001eb223040 Zea mays HOM05D005044 ORTHO05D006799 8.4e-15 83.2 47 76.6
MSTRG.17471 Avicennia marina HOM05D005044 ORTHO05D006799 1.1e-14 82.8 52 71.2
MELO3C007015.2 Cucumis melo HOM05D005044 ORTHO05D006799 1.1e-14 82.8 47 76.6
CsaV3_6G052930 Cucumis sativus L. HOM05D005044 ORTHO05D006799 1.1e-14 82.8 47 76.6
DCAR_018443 Daucus carota HOM05D005044 ORTHO05D006799 1.1e-14 82.8 47 76.6
Dinv34561 Davidia involucrata HOM05D005044 ORTHO05D006799 1.1e-14 82.8 47 78.7
ECA247G2181 Erigeron canadensis HOM05D005044 ORTHO05D006799 1.1e-14 82.8 47 76.6
Eucgr.K03317 Eucalyptus grandis HOM05D005044 ORTHO05D006799 1.1e-14 82.8 47 76.6
Phvul.001G156000 Phaseolus vulgaris HOM05D005044 ORTHO05D006799 1.1e-14 82.8 47 80.9
TPR.G19106 Trifolium pratense HOM05D005044 ORTHO05D006799 1.1e-14 82.8 47 76.6
TAR365G0173 Trochodendron aralioides HOM05D005044 ORTHO05D006799 1.1e-14 82.8 55 67.3
VMungo1383G1961 Vigna mungo HOM05D005044 ORTHO05D006799 1.1e-14 82.8 47 80.9
Lsat_1_v5_gn_9_8160 Lactuca sativa HOM05D005044 ORTHO05D006799 1.4e-14 82.4 47 76.6
Pp3c2_9560 Physcomitrium patens HOM05D005044 ORTHO05D006799 1.4e-14 82.4 45 77.8
QL12p042617 Quercus lobata HOM05D005044 ORTHO05D006799 1.4e-14 82.4 47 76.6
Aqoxy2G03504 Aquilegia oxysepala HOM05D005044 ORTHO05D006799 1.9e-14 82.0 47 74.5
Potri.002G045900 Populus trichocarpa HOM05D005044 ORTHO05D006799 1.9e-14 82.0 47 76.6
Sabra02G0036800 Salix brachista HOM05D005044 ORTHO05D006799 1.9e-14 82.0 47 76.6
Solyc10g045390.2 Solanum lycopersicum HOM05D005044 ORTHO05D006799 1.9e-14 82.0 47 78.7
Sopen10g015430 Solanum pennellii HOM05D005044 ORTHO05D006799 1.9e-14 82.0 47 78.7
SEGI_32822 Sequoiadendron giganteum HOM05D005044 ORTHO05D006799 2.4e-14 81.6 46 78.3
Atru.chr5.1554 Acer truncatum HOM05D005044 ORTHO05D006799 3.2e-14 81.3 47 74.5
CiPaw.04G181200 Carya illinoinensis HOM05D005044 ORTHO05D006799 3.2e-14 81.3 47 74.5
Medtr7g096040 Medicago truncatula HOM05D005044 ORTHO05D006799 4.2e-14 80.9 47 76.6
Eucgr.K03316 Eucalyptus grandis HOM05D005044 ORTHO05D006799 5.5e-14 80.5 47 76.6
PSO210G5903 Papaver somniferum HOM05D005044 ORTHO05D006799 5.5e-14 80.5 47 74.5
PSO832G0444 Papaver somniferum HOM05D005044 ORTHO05D006799 5.5e-14 80.5 47 74.5
FAN15G1010 Fragaria x ananassa HOM05D005044 ORTHO05D006799 7.1e-14 80.1 44 81.8
MBI04_g08415_MAGBIO Magnolia biondii HOM05D005044 ORTHO05D006799 7.1e-14 80.1 47 74.5
Medtr8g062330 Medicago truncatula HOM05D005044 ORTHO05D006799 7.1e-14 80.1 47 74.5
Nitab4.5_0004093g0020 Nicotiana tabacum HOM05D005044 ORTHO05D020187 7.1e-14 80.1 46 80.4
Peaxi162Scf01826g00011 Petunia axillaris HOM05D005044 ORTHO05D020187 9.3e-14 79.7 46 78.3
vmacro02624 Vaccinium macrocarpon HOM05D005044 ORTHO05D006799 9.3e-14 79.7 45 77.8
Haze_24523 Corylus avellana HOM05D005044 ORTHO05D006799 1.6e-13 79.0 45 75.6
FAN24G0661 Fragaria x ananassa HOM05D005044 ORTHO05D006799 2.7e-13 78.2 47 76.6
PSO461G0059 Papaver somniferum HOM05D005044 ORTHO05D006799 2.7e-13 78.2 47 70.2
CSS0043243 Camellia sinensis var. sinensis HOM05D005044 ORTHO05D006799 3.5e-13 77.8 45 75.6
ATR0665G603 Amborella trichopoda HOM05D005044 ORTHO05D006799 4.6e-13 77.4 46 73.9
HPP92_026599 Vanilla planifolia HOM05D005044 ORTHO05D006799 6.0e-13 77.0 44 75.0
Mapoly0187s0003 Marchantia polymorpha HOM05D005044 ORTHO05D006799 7.9e-13 76.6 46 76.1
SMO367G0544 Selaginella moellendorffii HOM05D005044 ORTHO05D006799 7.9e-13 76.6 46 69.6
PSO210G1356 Papaver somniferum HOM05D005044 ORTHO05D006799 1.8e-12 75.5 47 68.1
CBR_g46433 Chara braunii HOM05D005044 ORTHO05D006799 3.0e-12 74.7 46 63.0
Aqoxy5G00364 Aquilegia oxysepala HOM05D005044 ORTHO05D006799 5.6e-11 70.5 46 60.9
MCO07G152 Micromonas commoda HOM05D005044 ORTHO05D006799 5.6e-11 70.5 46 69.6
Cre06.g256200 Chlamydomonas reinhardtii HOM05D005044 ORTHO05D006799 5.3e-09 63.9 45 62.2
PRCOL_00003272 Prasinoderma coloniale HOM05D005044 ORTHO05D006799 6.9e-09 63.5 46 58.7
Haze_26753 Corylus avellana HOM05D005044 ORTHO05D006799 1.4e-06 55.8 46 52.2
CSS0023052 Camellia sinensis var. sinensis HOM05D005044 ORTHO05D020187 2.5e-06 55.1 29 79.3
SHI09971 Sapria himalayana HOM05D005044 ORTHO05D006799 4.2e-06 54.3 33 72.7
AUR62032265 Chenopodium quinoa HOM05D005044 ORTHO05D006799 5.5e-06 53.9 33 72.7


User provided reference genes

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