Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p13700 Brassica napus HOM05D009411 ORTHO05D014997 9.9e-61 236.5 112 100.0
A09p47020 Brassica napus HOM05D009411 ORTHO05D014997 9.9e-61 236.5 112 100.0
BraA09t40167Z Brassica rapa HOM05D009411 ORTHO05D014997 9.9e-61 236.5 112 100.0
C09p26700 Brassica napus HOM05D009411 ORTHO05D014997 3.5e-58 228.0 112 93.8
BolC9t55562H Brassica oleracea HOM05D009411 ORTHO05D014997 2.3e-57 225.3 112 92.0
BcaC04g21847 Brassica carinata HOM05D009411 ORTHO05D014997 3.9e-57 224.6 112 92.9
C07p34600 Brassica napus HOM05D009411 ORTHO05D014997 8.7e-57 223.4 112 91.1
BolC7t43992H Brassica oleracea HOM05D009411 ORTHO05D014997 8.7e-57 223.4 112 91.1
C03p49680 Brassica napus HOM05D009411 ORTHO05D014997 2.1e-55 218.8 112 89.3
BolC3t17266H Brassica oleracea HOM05D009411 ORTHO05D014997 2.1e-55 218.8 112 89.3
BolC6t37922H Brassica oleracea HOM05D009411 ORTHO05D014997 8.2e-55 216.9 112 90.2
BolC1t05558H Brassica oleracea HOM05D009411 ORTHO05D014997 3.3e-48 194.9 112 82.1
BcaC01g03679 Brassica carinata HOM05D009411 ORTHO05D014997 1.6e-47 192.6 112 81.2
BcaC06g33962 Brassica carinata HOM05D009411 ORTHO05D003352 4.8e-47 191.0 112 80.4
A09p23690 Brassica napus HOM05D009411 ORTHO05D014107 2.5e-40 168.7 77 100.0
A03p06230 Brassica napus HOM05D009411 ORTHO05D014107 2.2e-39 165.6 77 97.4
A03p13170 Brassica napus HOM05D009411 ORTHO05D014107 2.2e-39 165.6 77 97.4
A04p14650 Brassica napus HOM05D009411 ORTHO05D014107 5.3e-30 134.4 69 88.4
BcaB04g17896 Brassica carinata HOM05D003839 ORTHO05D003352 7.7e-29 130.6 82 72.0
BcaC04g22403 Brassica carinata HOM05D009411 ORTHO05D014107 2.2e-28 129.0 73 78.1
BraA04t16148Z Brassica rapa HOM05D009411 ORTHO05D014107 7.2e-27 124.0 82 63.4
BraA01t01218Z Brassica rapa HOM05D009411 ORTHO05D014107 8.0e-26 120.6 82 62.2
A06p18790 Brassica napus HOM05D009411 ORTHO05D014107 7.4e-24 114.0 78 61.5
BraA09t38186Z Brassica rapa HOM05D009411 ORTHO05D014107 7.4e-24 114.0 83 60.2
C01p32100 Brassica napus HOM05D009411 ORTHO05D014107 2.2e-23 112.5 80 60.0
BcaC01g02980 Brassica carinata HOM05D003839 ORTHO05D003352 2.4e-22 109.0 108 44.4
C04p53270 Brassica napus HOM05D009411 ORTHO05D014107 4.1e-22 108.2 80 58.8
BolC4t26883H Brassica oleracea HOM05D009411 ORTHO05D014107 4.1e-22 108.2 80 58.8
A10p04960 Brassica napus HOM05D009411 ORTHO05D014107 1.2e-21 106.7 76 57.9
A10p16990 Brassica napus HOM05D009411 ORTHO05D014107 1.2e-21 106.7 76 57.9
Thhalv10002164m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 2.9e-20 102.1 107 40.2
BcaC04g19582 Brassica carinata HOM05D012684 ORTHO05D014107 3.8e-20 101.7 81 58.0
Thhalv10005441m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 1.6e-18 96.3 105 40.0
BcaC01g02162 Brassica carinata HOM05D003839 ORTHO05D003352 1.5e-16 89.7 106 35.8
C04p41030 Brassica napus HOM05D003839 ORTHO05D003352 3.3e-16 88.6 104 37.5
BolC4t25686H Brassica oleracea HOM05D003839 ORTHO05D003352 3.3e-16 88.6 104 37.5
C03p73920 Brassica napus HOM05D009411 ORTHO05D097057 5.7e-16 87.8 40 97.5
C05p53690 Brassica napus HOM05D009411 ORTHO05D003352 1.7e-15 86.3 101 41.6
BcaB04g18557 Brassica carinata HOM05D003839 ORTHO05D003352 2.2e-15 85.9 45 82.2
BcaB05g21582 Brassica carinata HOM05D003839 ORTHO05D003352 2.2e-15 85.9 45 82.2
BcaB05g24307 Brassica carinata HOM05D003839 ORTHO05D003352 2.8e-15 85.5 106 37.7
BraA08t34532Z Brassica rapa HOM05D003839 ORTHO05D003352 4.8e-15 84.7 109 33.9
C09p21410 Brassica napus HOM05D003839 ORTHO05D003352 8.2e-15 84.0 106 32.1
Thhalv10005434m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 1.4e-14 83.2 108 31.5
BcaB08g35221 Brassica carinata HOM05D003839 ORTHO05D003352 1.8e-14 82.8 106 32.1
A09p20270 Brassica napus HOM05D003839 ORTHO05D003352 1.8e-14 82.8 106 33.0
BcaB02g06630 Brassica carinata HOM05D003839 ORTHO05D003352 5.3e-14 81.3 106 34.9
BolC3t20345H Brassica oleracea HOM05D003839 ORTHO05D003352 7.0e-14 80.9 103 34.0
BcaB07g31374 Brassica carinata HOM05D003839 ORTHO05D003352 9.1e-14 80.5 103 34.0
C05p17950 Brassica napus HOM05D003839 ORTHO05D003352 9.1e-14 80.5 107 36.4
BcaB04g17804 Brassica carinata HOM05D003839 ORTHO05D003352 2.0e-13 79.3 101 32.7
BraA02t07279Z Brassica rapa HOM05D003839 ORTHO05D003352 2.7e-13 79.0 106 31.1
BraA07t28801Z Brassica rapa HOM05D003839 ORTHO05D003352 4.5e-13 78.2 106 32.1
A09p19700 Brassica napus HOM05D003839 ORTHO05D003352 5.9e-13 77.8 101 32.7
A03p67960 Brassica napus HOM05D003839 ORTHO05D003352 7.7e-13 77.4 101 32.7
BraA09t40513Z Brassica rapa HOM05D003839 ORTHO05D003352 2.2e-12 75.9 103 35.9
C09p23320 Brassica napus HOM05D003839 ORTHO05D003352 3.8e-12 75.1 104 30.8
BolC5t32306H Brassica oleracea HOM05D003839 ORTHO05D003352 5.0e-12 74.7 104 31.7
BolC8t51019H Brassica oleracea HOM05D003839 ORTHO05D003352 5.0e-12 74.7 106 32.1
BcaC06g33695 Brassica carinata HOM05D003839 ORTHO05D003352 6.5e-12 74.3 104 30.8
BcaC09g50233 Brassica carinata HOM05D003839 ORTHO05D003352 6.5e-12 74.3 104 30.8
C03p63070 Brassica napus HOM05D003839 ORTHO05D003352 6.5e-12 74.3 104 30.8
BolC8t48491H Brassica oleracea HOM05D003839 ORTHO05D003352 6.5e-12 74.3 104 30.8
C03p63060 Brassica napus HOM05D003839 ORTHO05D003352 1.1e-11 73.6 104 30.8
BcaC05g27601 Brassica carinata HOM05D003839 ORTHO05D003352 1.5e-11 73.2 104 30.8
C05p35870 Brassica napus HOM05D003839 ORTHO05D003352 1.5e-11 73.2 104 30.8
C08p34220 Brassica napus HOM05D003839 ORTHO05D003352 1.5e-11 73.2 106 32.1
C09p49180 Brassica napus HOM05D003839 ORTHO05D003352 1.5e-11 73.2 104 30.8
BcaC04g22104 Brassica carinata HOM05D003839 ORTHO05D003352 4.2e-11 71.6 95 32.6
BraA02t07902Z Brassica rapa HOM05D003839 ORTHO05D003352 4.2e-11 71.6 104 28.8
AL8G28420 Arabidopsis lyrata HOM05D003839 ORTHO05D003352 7.2e-11 70.9 89 32.6
BcaC03g15184 Brassica carinata HOM05D003839 ORTHO05D003352 7.2e-11 70.9 95 32.6
AL4G17890 Arabidopsis lyrata HOM05D003839 ORTHO05D003352 1.2e-10 70.1 89 32.6
A01p36380 Brassica napus HOM05D003839 ORTHO05D003352 1.2e-10 70.1 106 32.1
C05p33380 Brassica napus HOM05D000313 ORTHO05D000065 4.7e-10 68.2 108 29.6
BolC5t32063H Brassica oleracea HOM05D000313 ORTHO05D000065 4.7e-10 68.2 108 29.6
AT5G17167 Arabidopsis thaliana HOM05D003839 ORTHO05D003352 1.0e-09 67.0 108 28.7
A02p28670 Brassica napus HOM05D003839 ORTHO05D003352 1.4e-09 66.6 104 27.9
C02p27640 Brassica napus HOM05D003839 ORTHO05D003352 2.3e-09 65.9 94 30.9
BcaB02g06628 Brassica carinata HOM05D009411 ORTHO05D021732 5.2e-09 64.7 78 33.3
C04p33340 Brassica napus HOM05D003839 ORTHO05D003352 5.2e-09 64.7 103 28.2
BcaC05g25843 Brassica carinata HOM05D003839 ORTHO05D003352 3.4e-08 62.0 92 32.6
C02p27160 Brassica napus HOM05D003839 ORTHO05D003352 4.4e-08 61.6 94 28.7
BcaB06g27608 Brassica carinata HOM05D003839 ORTHO05D021732 5.7e-08 61.2 79 30.4
BcaC06g36011 Brassica carinata HOM05D003839 ORTHO05D003352 5.7e-08 61.2 100 33.0
BcaC08g44872 Brassica carinata HOM05D003839 ORTHO05D003352 5.7e-08 61.2 108 31.5
A06p31430 Brassica napus HOM05D003839 ORTHO05D003352 9.8e-08 60.5 85 35.3
A05p21290 Brassica napus HOM05D003839 ORTHO05D003352 1.3e-07 60.1 106 30.2
BraA05t21037Z Brassica rapa HOM05D003839 ORTHO05D003352 1.3e-07 60.1 106 30.2
BcaC05g25845 Brassica carinata HOM05D003839 ORTHO05D003352 2.2e-07 59.3 82 31.7
C06p24900 Brassica napus HOM05D010997 ORTHO05D003352 2.2e-07 59.3 85 30.6
C08p23400 Brassica napus HOM05D003839 ORTHO05D003352 2.2e-07 59.3 82 34.1
BcaC04g22280 Brassica carinata HOM05D003839 ORTHO05D003352 3.7e-07 58.5 106 26.4
C01p35470 Brassica napus HOM05D003839 ORTHO05D021732 3.7e-07 58.5 68 33.8
BolC1t03505H Brassica oleracea HOM05D003839 ORTHO05D021732 3.7e-07 58.5 68 33.8
BraA01t03014Z Brassica rapa HOM05D003839 ORTHO05D003352 3.7e-07 58.5 73 39.7
BcaC07g40307 Brassica carinata HOM05D007092 ORTHO05D008947 6.3e-07 57.8 76 31.6
C06p24070 Brassica napus HOM05D018430 ORTHO05D020143 1.8e-06 56.2 72 37.5
BolC2t09048H Brassica oleracea HOM05D003839 ORTHO05D003352 2.4e-06 55.8 75 30.7
BolC9t57767H Brassica oleracea HOM05D003839 ORTHO05D003352 4.1e-06 55.1 75 30.7


User provided reference genes

Program Settings