Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p46300 Brassica napus HOM05D000209 ORTHO05D014056 7.3e-49 196.8 94 100.0
BcaB01g00294 Brassica carinata HOM05D000209 ORTHO05D014056 3.4e-30 134.8 99 70.7
BcaB07g32803 Brassica carinata HOM05D000209 ORTHO05D000129 3.8e-29 131.3 99 71.7
C04p21200 Brassica napus HOM05D000209 ORTHO05D000129 5.3e-23 110.9 101 61.4
C04p21180 Brassica napus HOM05D000209 ORTHO05D000129 2.2e-16 89.0 85 60.0
Carub.0003s1977 Capsella rubella HOM05D000209 ORTHO05D000129 1.1e-12 76.6 93 49.5
AT3G19880 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 4.2e-12 74.7 96 50.0
AL1G46220 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 2.7e-11 72.0 80 50.0
CARHR095400 Cardamine hirsuta HOM05D000209 ORTHO05D000129 2.7e-11 72.0 97 40.2
C03p50600 Brassica napus HOM05D000209 ORTHO05D000129 3.6e-11 71.6 102 48.0
BolC3t17349H Brassica oleracea HOM05D000209 ORTHO05D000129 3.6e-11 71.6 102 48.0
AT3G20030 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 6.1e-11 70.9 107 48.6
AT1G32140 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 7.9e-11 70.5 81 51.9
A03p41270 Brassica napus HOM05D000209 ORTHO05D000129 1.4e-10 69.7 95 42.1
BolC3t17334H Brassica oleracea HOM05D000209 ORTHO05D000129 1.4e-10 69.7 95 43.2
A03p41890 Brassica napus HOM05D000209 ORTHO05D000129 3.9e-10 68.2 97 47.4
BraA03t13343Z Brassica rapa HOM05D000209 ORTHO05D000129 3.9e-10 68.2 97 47.4
AL5G29310 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 6.7e-10 67.4 72 48.6
BraA03t13281Z Brassica rapa HOM05D000209 ORTHO05D000129 8.8e-10 67.0 95 41.1
Carub.0001s3046 Capsella rubella HOM05D000209 ORTHO05D000129 8.8e-10 67.0 101 47.5
Carub.0001s3510 Capsella rubella HOM05D000209 ORTHO05D000129 8.8e-10 67.0 89 49.4
AL5G29320 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.5e-09 66.2 72 50.0
AT3G49510 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.5e-09 66.2 72 50.0
BcaC01g03624 Brassica carinata HOM05D000209 ORTHO05D000129 1.5e-09 66.2 95 41.1
C03p50380 Brassica napus HOM05D000209 ORTHO05D000129 1.5e-09 66.2 95 41.1
BolC3t17331H Brassica oleracea HOM05D000209 ORTHO05D000129 1.5e-09 66.2 95 41.1
CARHR094260 Cardamine hirsuta HOM05D000209 ORTHO05D000129 1.5e-09 66.2 76 50.0
BraA03t13297Z Brassica rapa HOM05D000209 ORTHO05D000129 2.0e-09 65.9 76 50.0
A03p41290 Brassica napus HOM05D000209 ORTHO05D000129 2.5e-09 65.5 95 41.1
BraA03t13283Z Brassica rapa HOM05D000209 ORTHO05D000129 2.5e-09 65.5 95 41.1
Carub.0003s1660 Capsella rubella HOM05D000209 ORTHO05D000129 2.5e-09 65.5 66 54.5
C03p50730 Brassica napus HOM05D000209 ORTHO05D000129 3.3e-09 65.1 76 50.0
Carub.0003s1661 Capsella rubella HOM05D000209 ORTHO05D000129 3.3e-09 65.1 70 55.7
AL5G29340 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 4.3e-09 64.7 72 51.4
AT3G49520 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 4.3e-09 64.7 73 46.6
BcaB04g18933 Brassica carinata HOM05D000209 ORTHO05D000129 4.3e-09 64.7 88 45.5
A08p13990 Brassica napus HOM05D000209 ORTHO05D014056 4.3e-09 64.7 86 41.9
BraA08t33390Z Brassica rapa HOM05D000209 ORTHO05D000129 4.3e-09 64.7 86 41.9
Thhalv10023848m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 5.7e-09 64.3 100 42.0
AL6G52510 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 7.4e-09 63.9 73 52.1
AT3G19890 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 7.4e-09 63.9 106 39.6
BcaC01g03599 Brassica carinata HOM05D000209 ORTHO05D000129 7.4e-09 63.9 76 48.7
BolC3t17361H Brassica oleracea HOM05D000209 ORTHO05D000129 7.4e-09 63.9 76 48.7
AL1G35700 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 9.7e-09 63.5 96 41.7
AL3G30920 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 9.7e-09 63.5 85 49.4
AL3G36710 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 9.7e-09 63.5 68 50.0
A05p15810 Brassica napus HOM05D000209 ORTHO05D000129 9.7e-09 63.5 71 47.9
BolC3t20418H Brassica oleracea HOM05D000209 ORTHO05D014056 9.7e-09 63.5 98 36.7
BraA05t20495Z Brassica rapa HOM05D000209 ORTHO05D000129 9.7e-09 63.5 71 47.9
Carub.0003s1995 Capsella rubella HOM05D000209 ORTHO05D000129 9.7e-09 63.5 93 48.4
AT3G17620 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.3e-08 63.2 70 52.9
AL3G25680 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.7e-08 62.8 77 48.1
AL3G51580 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.7e-08 62.8 66 57.6
CARHR092940 Cardamine hirsuta HOM05D000209 ORTHO05D000129 1.7e-08 62.8 85 47.1
CARHR260790 Cardamine hirsuta HOM05D000209 ORTHO05D000129 1.7e-08 62.8 90 40.0
AL3G38080 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 2.2e-08 62.4 72 51.4
BcaB04g20819 Brassica carinata HOM05D000209 ORTHO05D000129 2.2e-08 62.4 64 54.7
AL3G33370 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 2.8e-08 62.0 81 48.1
AT3G16880 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 2.8e-08 62.0 67 53.7
BcaC01g03771 Brassica carinata HOM05D000209 ORTHO05D000129 2.8e-08 62.0 69 50.7
BcaC01g03778 Brassica carinata HOM05D000209 ORTHO05D000129 2.8e-08 62.0 69 50.7
Carub.0003s1978 Capsella rubella HOM05D000209 ORTHO05D000129 2.8e-08 62.0 100 40.0
Carub.0003s2561 Capsella rubella HOM05D000209 ORTHO05D000129 2.8e-08 62.0 80 46.2
Carub.0005s2337 Capsella rubella HOM05D000209 ORTHO05D000129 2.8e-08 62.0 91 38.5
AL275U10020 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 3.7e-08 61.6 108 41.7
AL2G23050 Arabidopsis lyrata HOM05D000209 ORTHO05D014056 3.7e-08 61.6 93 43.0
BolC3t17150H Brassica oleracea HOM05D000209 ORTHO05D000129 3.7e-08 61.6 69 50.7
Carub.0008s1500 Capsella rubella HOM05D000209 ORTHO05D000129 3.7e-08 61.6 91 38.5
CARHR088600 Cardamine hirsuta HOM05D000209 ORTHO05D000129 3.7e-08 61.6 73 49.3
CARHR095410 Cardamine hirsuta HOM05D000209 ORTHO05D000129 3.7e-08 61.6 82 43.9
AL3G34620 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 4.8e-08 61.2 94 39.4
BcaC01g00570 Brassica carinata HOM05D000209 ORTHO05D014056 4.8e-08 61.2 86 39.5
BcaC04g19787 Brassica carinata HOM05D000209 ORTHO05D000129 6.3e-08 60.8 90 45.6
BolC7t44630H Brassica oleracea HOM05D000209 ORTHO05D000129 6.3e-08 60.8 90 45.6
BolC9t58027H Brassica oleracea HOM05D000209 ORTHO05D000129 6.3e-08 60.8 90 45.6
AL3G30730 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 8.2e-08 60.5 77 48.1
CARHR260760 Cardamine hirsuta HOM05D000209 ORTHO05D000129 8.2e-08 60.5 88 40.9
Thhalv10002786m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 8.2e-08 60.5 78 51.3
AT1G66490 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.1e-07 60.1 94 42.6
Carub.0001s2536 Capsella rubella HOM05D000209 ORTHO05D000129 1.1e-07 60.1 109 36.7
CARHR158510 Cardamine hirsuta HOM05D000209 ORTHO05D000129 1.1e-07 60.1 74 44.6
Thhalv10023095m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 1.1e-07 60.1 82 46.3
AT5G36730 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.4e-07 59.7 67 53.7
AT5G36820 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.4e-07 59.7 67 53.7
AL5G24990 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.8e-07 59.3 97 44.3
AT1G24800 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.8e-07 59.3 89 40.4
AT1G24881 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.8e-07 59.3 89 40.4
AT1G25055 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.8e-07 59.3 89 40.4
AT1G25150 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.8e-07 59.3 89 40.4
AT1G25211 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.8e-07 59.3 89 40.4
AT3G17320 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.8e-07 59.3 68 48.5
AT5G60560 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 2.4e-07 58.9 100 43.0
BcaC09g48650 Brassica carinata HOM05D000209 ORTHO05D000129 2.4e-07 58.9 72 48.6
BolC1t04697H Brassica oleracea HOM05D000209 ORTHO05D000129 2.4e-07 58.9 72 48.6
BraA10t43735Z Brassica rapa HOM05D000209 ORTHO05D000129 2.4e-07 58.9 88 45.5
Carub.0003s1235 Capsella rubella HOM05D000209 ORTHO05D000129 2.4e-07 58.9 84 41.7
CARHR154640 Cardamine hirsuta HOM05D000209 ORTHO05D000129 2.4e-07 58.9 85 42.4
AL1G40170 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 3.1e-07 58.5 93 38.7
AL3G29740 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 3.1e-07 58.5 90 40.0
AT2G17830 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 3.1e-07 58.5 71 49.3
C07p41000 Brassica napus HOM05D000209 ORTHO05D000129 3.1e-07 58.5 88 43.2
Carub.0003s1975 Capsella rubella HOM05D000209 ORTHO05D000129 3.1e-07 58.5 89 43.8
AL3G33700 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 4.1e-07 58.2 84 47.6
AL5G27570 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 4.1e-07 58.2 86 40.7
AT3G19470 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 4.1e-07 58.2 65 55.4
BcaC01g03775 Brassica carinata HOM05D000209 ORTHO05D000129 4.1e-07 58.2 69 49.3
AL1G54030 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 5.3e-07 57.8 81 43.2
AL3G40130 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 5.3e-07 57.8 71 50.7
AL3G50860 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 5.3e-07 57.8 89 43.8
AT2G18320 Arabidopsis thaliana HOM05D030957 ORTHO05D014056 5.3e-07 57.8 60 58.3
AT5G42460 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 5.3e-07 57.8 89 41.6
AL3G27510 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 6.9e-07 57.4 80 38.8
AL3G33690 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 6.9e-07 57.4 108 40.7
BcaB04g19065 Brassica carinata HOM05D000209 ORTHO05D000129 6.9e-07 57.4 98 40.8
AL1G53830 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 9.1e-07 57.0 70 50.0
AL3G34120 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 9.1e-07 57.0 72 45.8
AT5G36200 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 9.1e-07 57.0 88 42.0
BcaC06g31389 Brassica carinata HOM05D000209 ORTHO05D000129 9.1e-07 57.0 67 50.7
BcaC09g48651 Brassica carinata HOM05D000209 ORTHO05D000129 9.1e-07 57.0 73 52.1
C01p47270 Brassica napus HOM05D000209 ORTHO05D000129 9.1e-07 57.0 72 47.2
Thhalv10000638m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 9.1e-07 57.0 87 40.2
Thhalv10022026m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 9.1e-07 57.0 87 44.8
Thhalv10022067m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 9.1e-07 57.0 71 49.3
AL2G18120 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.2e-06 56.6 70 45.7
AL3G25710 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.2e-06 56.6 81 42.0
BcaB04g20882 Brassica carinata HOM05D000209 ORTHO05D000129 1.2e-06 56.6 67 49.3
BcaC06g34070 Brassica carinata HOM05D000209 ORTHO05D000129 1.2e-06 56.6 69 46.4
BcaC08g46165 Brassica carinata HOM05D000209 ORTHO05D000129 1.2e-06 56.6 77 36.4
Carub.0003s1761 Capsella rubella HOM05D000209 ORTHO05D000129 1.2e-06 56.6 70 50.0
AL1G40180 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.5e-06 56.2 92 37.0
AT3G24580 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.5e-06 56.2 84 41.7
Thhalv10003097m.g Eutrema salsugineum HOM05D000209 ORTHO05D014056 1.5e-06 56.2 99 41.4
Thhalv10022798m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 1.5e-06 56.2 69 50.7
Sp3g32750 Schrenkiella parvula HOM05D000209 ORTHO05D014056 1.5e-06 56.2 77 42.9
AL3G33320 Arabidopsis lyrata HOM05D000209 ORTHO05D023627 2.0e-06 55.8 90 46.7
AL3G33440 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 2.0e-06 55.8 86 40.7
A05p33650 Brassica napus HOM05D000209 ORTHO05D000129 2.0e-06 55.8 88 43.2
BolC5t33815H Brassica oleracea HOM05D000209 ORTHO05D000129 2.0e-06 55.8 86 44.2
Carub.0003s1703 Capsella rubella HOM05D000209 ORTHO05D000129 2.0e-06 55.8 76 44.7
CARHR060010 Cardamine hirsuta HOM05D000209 ORTHO05D000129 2.0e-06 55.8 79 43.0
CARHR214390 Cardamine hirsuta HOM05D000209 ORTHO05D000129 2.0e-06 55.8 64 53.1
AL3G29750 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 2.6e-06 55.5 86 41.9
AL7G17020 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 2.6e-06 55.5 71 47.9
AT3G13680 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 2.6e-06 55.5 76 42.1
BcaB04g19044 Brassica carinata HOM05D000209 ORTHO05D000129 2.6e-06 55.5 60 46.7
BraA05t22190Z Brassica rapa HOM05D000209 ORTHO05D000129 2.6e-06 55.5 88 43.2
Carub.0001s1047 Capsella rubella HOM05D000209 ORTHO05D000129 2.6e-06 55.5 77 46.8
Thhalv10020932m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 2.6e-06 55.5 88 39.8
Thhalv10022148m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 2.6e-06 55.5 68 50.0
BcaC05g28939 Brassica carinata HOM05D000209 ORTHO05D000129 3.4e-06 55.1 72 51.4
BcaC06g36638 Brassica carinata HOM05D000209 ORTHO05D000129 3.4e-06 55.1 103 34.0
BolC7t40602H Brassica oleracea HOM05D000209 ORTHO05D000129 3.4e-06 55.1 103 34.0
BraA04t18465Z Brassica rapa HOM05D000209 ORTHO05D000129 3.4e-06 55.1 72 54.2
Carub.0003s2032 Capsella rubella HOM05D000209 ORTHO05D000129 3.4e-06 55.1 78 44.9
CARHR096510 Cardamine hirsuta HOM05D000209 ORTHO05D000129 3.4e-06 55.1 68 50.0
CARHR127660 Cardamine hirsuta HOM05D000209 ORTHO05D000129 3.4e-06 55.1 63 46.0
Thhalv10001171m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 3.4e-06 55.1 71 47.9
Thhalv10017624m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 3.4e-06 55.1 96 37.5
AL3G30480 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 4.5e-06 54.7 83 43.4
C05p50670 Brassica napus HOM05D000209 ORTHO05D000129 4.5e-06 54.7 86 44.2
BolC4t28014H Brassica oleracea HOM05D000209 ORTHO05D000129 4.5e-06 54.7 78 46.2
CARHR107830 Cardamine hirsuta HOM05D000209 ORTHO05D000129 4.5e-06 54.7 71 46.5
AL3G29760 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 5.9e-06 54.3 75 44.0
AT3G22770 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 5.9e-06 54.3 70 51.4
AT4G17200 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 5.9e-06 54.3 82 43.9
CARHR189820 Cardamine hirsuta HOM05D000209 ORTHO05D000129 5.9e-06 54.3 71 43.7
AL769U10010 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 7.7e-06 53.9 82 42.7
BcaB04g19128 Brassica carinata HOM05D000209 ORTHO05D000129 7.7e-06 53.9 87 41.4
Carub.0003s2043 Capsella rubella HOM05D000209 ORTHO05D000129 7.7e-06 53.9 73 46.6
CARHR092000 Cardamine hirsuta HOM05D000209 ORTHO05D000129 7.7e-06 53.9 76 44.7


User provided reference genes

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