Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p45100 Brassica napus HOM05D007133 ORTHO05D008954 9.9e-43 176.4 91 100.0
BraA09t39971Z Brassica rapa HOM05D007133 ORTHO05D008954 9.9e-43 176.4 91 100.0
BcaB01g00452 Brassica carinata HOM05D007133 ORTHO05D008954 4.9e-42 174.1 91 98.9
C08p27290 Brassica napus HOM05D007133 ORTHO05D008954 4.9e-42 174.1 91 98.9
BolC8t50346H Brassica oleracea HOM05D007133 ORTHO05D008954 4.9e-42 174.1 91 98.9
C07p46740 Brassica napus HOM05D007133 ORTHO05D008954 1.9e-38 162.2 91 92.3
BolC7t45192H Brassica oleracea HOM05D007133 ORTHO05D008954 1.9e-38 162.2 91 92.3
BcaC06g33021 Brassica carinata HOM05D007133 ORTHO05D008954 2.5e-38 161.8 91 91.2
BcaC06g33378 Brassica carinata HOM05D007133 ORTHO05D008954 9.6e-38 159.8 91 91.2
Carub.0005s1836 Capsella rubella HOM05D007133 ORTHO05D008954 6.2e-37 157.1 91 86.8
Thhalv10010861m.g Eutrema salsugineum HOM05D007133 ORTHO05D008954 1.1e-36 156.4 91 89.0
AT3G52040 Arabidopsis thaliana HOM05D007133 ORTHO05D008954 6.9e-36 153.7 91 84.6
A03p48620 Brassica napus HOM05D007133 ORTHO05D008954 1.5e-35 152.5 88 87.5
AL5G32580 Arabidopsis lyrata HOM05D007133 ORTHO05D008954 2.0e-35 152.1 91 84.6
BraA03t13967Z Brassica rapa HOM05D007133 ORTHO05D008954 2.0e-35 152.1 91 85.7
CARHR161670 Cardamine hirsuta HOM05D007133 ORTHO05D008954 8.4e-34 146.7 90 85.6
Aa31LG10G7080 Aethionema arabicum HOM05D007133 ORTHO05D008954 2.7e-32 141.7 92 83.7
Ciclev10033166m.g Citrus clementina HOM05D007133 ORTHO05D008954 2.2e-26 122.1 89 74.2
FvH4_7g01820 Fragaria vesca HOM05D007133 ORTHO05D008954 2.5e-25 118.6 87 66.7
FAN01G1667 Fragaria x ananassa HOM05D007133 ORTHO05D008954 2.5e-25 118.6 87 66.7
THA.LOC104817576 Tarenaya hassleriana HOM05D007133 ORTHO05D008954 2.5e-25 118.6 88 68.2
Cc02_g28790 Coffea canephora HOM05D007133 ORTHO05D008954 5.5e-25 117.5 87 67.8
RcHm_v2.0_Chr1g0318451 Rosa chinensis HOM05D007133 ORTHO05D008954 5.5e-25 117.5 87 65.5
GSVIVG01032212001 Vitis vinifera HOM05D007133 ORTHO05D008954 9.3e-25 116.7 91 68.1
CiPaw.14G003100 Carya illinoinensis HOM05D007133 ORTHO05D008954 2.1e-24 115.5 87 67.8
Nn7g36332 Nelumbo nucifera HOM05D007133 ORTHO05D008954 2.7e-24 115.2 87 66.7
Peaxi162Scf01270g00118 Petunia axillaris HOM05D007133 ORTHO05D008954 2.7e-24 115.2 87 66.7
Manes.10G136200 Manihot esculenta HOM05D007133 ORTHO05D008954 4.6e-24 114.4 91 69.2
Sc10g0000360 Simmondsia chinensis HOM05D007133 ORTHO05D008954 4.6e-24 114.4 83 65.1
CsaV3_7G030730 Cucumis sativus L. HOM05D007133 ORTHO05D008954 6.0e-24 114.0 85 65.9
Ah.10g038590 Amaranthus hybridus HOM05D007133 ORTHO05D008954 1.0e-23 113.2 91 63.7
Eucgr.G03322 Eucalyptus grandis HOM05D007133 ORTHO05D008954 1.0e-23 113.2 87 66.7
Actinidia21538 Actinidia chinensis HOM05D007133 ORTHO05D008954 1.3e-23 112.8 82 68.3
Atru.chr11.2512 Acer truncatum HOM05D007133 ORTHO05D008954 1.8e-23 112.5 79 69.6
Oeu027371.1 Olea europaea HOM05D007133 ORTHO05D008954 1.8e-23 112.5 87 64.4
Sed0015487 Sechium edule HOM05D007133 ORTHO05D008954 1.8e-23 112.5 82 67.1
Lalb_Chr25g0282521 Lupinus albus HOM05D007133 ORTHO05D008954 2.3e-23 112.1 77 71.4
Sabra09G0041600 Salix brachista HOM05D007133 ORTHO05D008954 2.3e-23 112.1 77 72.7
Dinv03122 Davidia involucrata HOM05D007133 ORTHO05D008954 3.0e-23 111.7 82 67.1
Dinv09308 Davidia involucrata HOM05D007133 ORTHO05D008954 3.0e-23 111.7 82 67.1
MD02G1300200 Malus domestica HOM05D007133 ORTHO05D008954 3.9e-23 111.3 77 71.4
MD07G1024700 Malus domestica HOM05D007133 ORTHO05D008954 3.9e-23 111.3 77 71.4
Zm00001eb332910 Zea mays HOM05D007133 ORTHO05D008954 5.1e-23 110.9 87 64.4
Potri.009G056800 Populus trichocarpa HOM05D007133 ORTHO05D008954 6.7e-23 110.5 90 64.4
Gohir.A12G100700 Gossypium hirsutum HOM05D007133 ORTHO05D008954 8.7e-23 110.2 77 70.1
Gohir.D12G103551 Gossypium hirsutum HOM05D007133 ORTHO05D008954 8.7e-23 110.2 77 70.1
Gorai.008G112700 Gossypium raimondii HOM05D007133 ORTHO05D008954 8.7e-23 110.2 77 70.1
arahy.Tifrunner.gnm1.ann1.1B9UE2 Arachis hypogaea HOM05D007133 ORTHO05D008954 1.1e-22 109.8 77 70.1
Duzib268G0834 Durio zibethinus HOM05D007133 ORTHO05D008954 1.5e-22 109.4 77 70.1
arahy.Tifrunner.gnm1.ann1.PZX0PK Arachis hypogaea HOM05D007133 ORTHO05D008954 1.9e-22 109.0 88 64.8
CSS0001581 Camellia sinensis var. sinensis HOM05D007133 ORTHO05D008954 1.9e-22 109.0 87 63.2
Glyma.09G226900 Glycine max HOM05D007133 ORTHO05D008954 1.9e-22 109.0 87 62.1
Glyma.12G009900 Glycine max HOM05D007133 ORTHO05D008954 1.9e-22 109.0 87 62.1
Lalb_Chr04g0263851 Lupinus albus HOM05D007133 ORTHO05D008954 1.9e-22 109.0 87 62.1
Nitab4.5_0008942g0020 Nicotiana tabacum HOM05D007133 ORTHO05D008954 1.9e-22 109.0 87 66.7
Phvul.011G010800 Phaseolus vulgaris HOM05D007133 ORTHO05D008954 1.9e-22 109.0 85 64.7
Potri.001G262000 Populus trichocarpa HOM05D007133 ORTHO05D008954 1.9e-22 109.0 87 63.2
Hund26515 Selenicereus undatus HOM05D007133 ORTHO05D008954 2.5e-22 108.6 87 60.9
PSO063G0957 Papaver somniferum HOM05D007133 ORTHO05D008954 4.3e-22 107.8 78 67.9
AUR62023097 Chenopodium quinoa HOM05D007133 ORTHO05D008954 5.7e-22 107.5 87 62.1
PGR031G3629 Punica granatum HOM05D007133 ORTHO05D008954 5.7e-22 107.5 87 58.6
vmacro21138 Vaccinium macrocarpon HOM05D007133 ORTHO05D008954 5.7e-22 107.5 87 62.1
EL10Ac2g04374 Beta vulgaris HOM05D007133 ORTHO05D008954 7.4e-22 107.1 89 58.4
ECA248G0684 Erigeron canadensis HOM05D007133 ORTHO05D008954 7.4e-22 107.1 77 70.1
Lsat_1_v5_gn_1_104961 Lactuca sativa HOM05D007133 ORTHO05D008954 7.4e-22 107.1 86 61.6
Thecc.01G406600 Theobroma cacao HOM05D007133 ORTHO05D008954 7.4e-22 107.1 77 68.8
COL.COLO4_12337 Corchorus olitorius HOM05D007133 ORTHO05D008954 9.7e-22 106.7 91 60.4
Lj3g0009786 Lotus japonicus HOM05D007133 ORTHO05D008954 9.7e-22 106.7 82 67.1
PSO170G5856 Papaver somniferum HOM05D007133 ORTHO05D008954 9.7e-22 106.7 78 66.7
Phvul.001G156100 Phaseolus vulgaris HOM05D007133 ORTHO05D008954 9.7e-22 106.7 77 66.2
SGA_v2.0_scaffold5G02955 Striga asiatica HOM05D007133 ORTHO05D008954 9.7e-22 106.7 79 64.6
TAR633G1269 Trochodendron aralioides HOM05D007133 ORTHO05D008954 1.3e-21 106.3 86 62.8
Prupe.2G024400 Prunus persica HOM05D007133 ORTHO05D008954 1.6e-21 105.9 87 62.1
TWI53G1532 Tripterygium wilfordii HOM05D007133 ORTHO05D008954 1.6e-21 105.9 90 63.3
MELO3C023583.2 Cucumis melo HOM05D007133 ORTHO05D008954 2.2e-21 105.5 99 56.6
CANSAT80G0888 Cannabis sativa HOM05D007133 ORTHO05D008954 2.8e-21 105.1 87 66.7
Migut.N01798 Erythranthe guttata HOM05D007133 ORTHO05D008954 2.8e-21 105.1 87 59.8
HanXRQChr06g0179721 Helianthus annuus HOM05D007133 ORTHO05D008954 2.8e-21 105.1 80 65.0
CDE08G1151 Ceratophyllum demersum HOM05D007133 ORTHO05D008954 3.7e-21 104.8 91 64.8
FAN10G0509 Fragaria x ananassa HOM05D007133 ORTHO05D008954 3.7e-21 104.8 79 64.6
Solyc01g087880.3 Solanum lycopersicum HOM05D007133 ORTHO05D008954 3.7e-21 104.8 90 66.7
Medtr0512s0010 Medicago truncatula HOM05D007133 ORTHO05D008954 4.8e-21 104.4 77 64.9
TWI09G1631 Tripterygium wilfordii HOM05D007133 ORTHO05D008954 6.3e-21 104.0 90 62.2
Sopen01g034810 Solanum pennellii HOM05D007133 ORTHO05D008954 1.1e-20 103.2 89 64.0
TPR.G30180 Trifolium pratense HOM05D007133 ORTHO05D008954 1.1e-20 103.2 77 64.9
PGSC0003DMG400006836 Solanum tuberosum HOM05D007133 ORTHO05D008954 1.8e-20 102.4 89 64.0
Aqoxy1G00141 Aquilegia oxysepala HOM05D007133 ORTHO05D008954 5.3e-20 100.9 90 58.9
Ca_26645_v3 Cicer arietinum L. HOM05D007133 ORTHO05D008954 2.0e-19 99.0 89 59.6
ClCG09G004410 Citrullus lanatus HOM05D007133 ORTHO05D008954 2.2e-18 95.5 117 47.0
Nitab4.5_0001244g0090 Nicotiana tabacum HOM05D007133 ORTHO05D008954 3.8e-18 94.7 113 51.3
Eucgr.G03325 Eucalyptus grandis HOM05D007133 ORTHO05D008954 6.5e-18 94.0 83 62.7
Cc00_g19310 Coffea canephora HOM05D004771 ORTHO05D005565 4.6e-16 87.8 79 63.3
Pp3c9_17680 Physcomitrium patens HOM05D007133 ORTHO05D008954 1.8e-15 85.9 90 56.7
unitig_8.g3622 Utricularia gibba HOM05D007133 ORTHO05D008954 3.0e-15 85.1 71 63.4
Haze_03143 Corylus avellana HOM05D007133 ORTHO05D008954 4.3e-14 81.3 155 37.4
Haze_03146 Corylus avellana HOM05D007133 ORTHO05D008954 4.3e-14 81.3 155 37.4
SalBow6G3002 Salvia bowleyana HOM05D007133 ORTHO05D008954 4.3e-14 81.3 122 41.0
MBI19_g09240_MAGBIO Magnolia biondii HOM05D007133 ORTHO05D008954 3.7e-13 78.2 196 33.2
Medtr4g101060 Medicago truncatula HOM05D007133 ORTHO05D008954 4.8e-13 77.8 59 59.3
AagrBONN_evm.TU.Sc2ySwM_344.2738 Anthoceros agrestis HOM05D007133 ORTHO05D008954 6.3e-13 77.4 87 54.0
Dinv09304 Davidia involucrata HOM05D007133 ORTHO05D008954 2.4e-12 75.5 53 66.0
Mapoly0049s0103 Marchantia polymorpha HOM05D007133 ORTHO05D008954 9.1e-12 73.6 93 48.4
HPP92_001020 Vanilla planifolia HOM05D007133 ORTHO05D008954 9.1e-12 73.6 64 57.8
QL04p010011 Quercus lobata HOM05D007133 ORTHO05D008954 5.0e-10 67.8 48 68.8
Psat7g197280 Pisum sativum HOM05D007133 ORTHO05D008954 1.9e-09 65.9 48 66.7
Hma1.2p1_0685F.1_g203210 Hydrangea macrophylla HOM05D007133 ORTHO05D008954 7.2e-09 63.9 49 65.3
Rhsim01G0126300 Rhododendron simsii HOM05D007133 ORTHO05D008954 9.4e-09 63.5 48 64.6
Os01g0271700 Oryza sativa ssp. japonica HOM05D007133 ORTHO05D008954 1.6e-08 62.8 48 64.6
Duzib133G0944 Durio zibethinus HOM05D007133 ORTHO05D008954 2.7e-08 62.0 48 64.6
Rhsim01G0126100 Rhododendron simsii HOM05D007133 ORTHO05D008954 9.7e-06 53.5 40 62.5


User provided reference genes

Program Settings