Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p44660 Brassica napus HOM05D006312 ORTHO05D007843 3.7e-100 368.2 187 100.0
BraA09t39926Z Brassica rapa HOM05D006312 ORTHO05D007843 4.5e-90 334.7 187 93.0
C08p26760 Brassica napus HOM05D006312 ORTHO05D007843 8.4e-89 330.5 187 90.9
BolC8t50289H Brassica oleracea HOM05D006312 ORTHO05D007843 8.4e-89 330.5 187 90.9
BcaB01g00508 Brassica carinata HOM05D006312 ORTHO05D007843 6.3e-84 314.3 189 86.8
Sp5g10730 Schrenkiella parvula HOM05D006312 ORTHO05D007843 6.5e-73 277.7 187 79.1
Carub.0005s1789 Capsella rubella HOM05D006312 ORTHO05D007843 1.9e-72 276.2 187 80.2
AT3G51510 Arabidopsis thaliana HOM05D006312 ORTHO05D007843 3.2e-72 275.4 185 80.5
Thhalv10010756m.g Eutrema salsugineum HOM05D006312 ORTHO05D007843 4.2e-72 275.0 187 80.2
AL5G31950 Arabidopsis lyrata HOM05D006312 ORTHO05D007843 1.0e-70 270.4 186 80.1
A01p23400 Brassica napus HOM05D006312 ORTHO05D007843 5.1e-70 268.1 183 80.9
BraA01t02247Z Brassica rapa HOM05D006312 ORTHO05D007843 5.1e-70 268.1 183 80.9
CARHR161090 Cardamine hirsuta HOM05D006312 ORTHO05D007843 5.1e-70 268.1 185 78.4
C01p29030 Brassica napus HOM05D006312 ORTHO05D007843 1.5e-69 266.5 182 80.2
BolC1t02835H Brassica oleracea HOM05D006312 ORTHO05D007843 1.5e-69 266.5 182 80.2
BcaNung00380 Brassica carinata HOM05D006312 ORTHO05D007843 8.8e-62 240.7 146 88.4
THA.LOC104815359 Tarenaya hassleriana HOM05D006312 ORTHO05D007843 1.3e-49 200.3 189 58.2
Ciclev10012864m.g Citrus clementina HOM05D006312 ORTHO05D007843 1.1e-48 197.2 172 63.4
Atru.chr2.1887 Acer truncatum HOM05D006312 ORTHO05D007843 2.5e-48 196.1 156 65.4
CSS0005301 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 3.2e-48 195.7 136 74.3
Manes.02G117611 Manihot esculenta HOM05D006312 ORTHO05D007843 3.2e-48 195.7 132 72.7
Gohir.A13G006700 Gossypium hirsutum HOM05D006312 ORTHO05D007843 4.2e-48 195.3 131 77.1
Prupe.7G188400 Prunus persica HOM05D006312 ORTHO05D007843 4.2e-48 195.3 179 58.1
COL.COLO4_27421 Corchorus olitorius HOM05D006312 ORTHO05D007843 5.5e-48 194.9 156 65.4
Thecc.05G202100 Theobroma cacao HOM05D006312 ORTHO05D007843 7.2e-48 194.5 142 69.0
CSS0026635 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 9.4e-48 194.1 135 74.1
Gorai.013G007100 Gossypium raimondii HOM05D006312 ORTHO05D007843 9.4e-48 194.1 131 76.3
Rhsim08G0025300 Rhododendron simsii HOM05D006312 ORTHO05D007843 1.2e-47 193.7 140 72.9
Gohir.D13G006900 Gossypium hirsutum HOM05D006312 ORTHO05D007843 2.7e-47 192.6 131 75.6
MD02G1107600 Malus domestica HOM05D006312 ORTHO05D007843 4.7e-47 191.8 155 67.7
Hund13396 Selenicereus undatus HOM05D006312 ORTHO05D007843 1.0e-46 190.7 130 74.6
Eucgr.J02573 Eucalyptus grandis HOM05D006312 ORTHO05D007843 2.3e-46 189.5 139 66.9
THA.LOC104808852 Tarenaya hassleriana HOM05D006312 ORTHO05D007843 2.3e-46 189.5 192 58.3
Sabra16G0308500 Salix brachista HOM05D006312 ORTHO05D007843 5.2e-46 188.3 160 63.8
Ca_08638_v3 Cicer arietinum L. HOM05D006312 ORTHO05D007843 8.8e-46 187.6 132 69.7
Potri.001G455900 Populus trichocarpa HOM05D006312 ORTHO05D007843 8.8e-46 187.6 133 72.2
Sc10g0004590 Simmondsia chinensis HOM05D006312 ORTHO05D007843 8.8e-46 187.6 131 74.0
arahy.Tifrunner.gnm1.ann1.YWP2KZ Arachis hypogaea HOM05D006312 ORTHO05D007843 1.5e-45 186.8 137 70.8
TWI34G0319 Tripterygium wilfordii HOM05D006312 ORTHO05D007843 2.0e-45 186.4 139 70.5
Glyma.03G158200 Glycine max HOM05D006312 ORTHO05D007843 2.6e-45 186.0 135 71.1
PGR102G2008 Punica granatum HOM05D006312 ORTHO05D007843 2.6e-45 186.0 129 73.6
arahy.Tifrunner.gnm1.ann1.Y34PHS Arachis hypogaea HOM05D006312 ORTHO05D007843 3.4e-45 185.7 137 70.1
Psat3g060840 Pisum sativum HOM05D006312 ORTHO05D007843 7.5e-45 184.5 135 70.4
MBI04_g11525_MAGBIO Magnolia biondii HOM05D006312 ORTHO05D007843 9.8e-45 184.1 147 64.6
VMungo1383G0261 Vigna mungo HOM05D006312 ORTHO05D007843 9.8e-45 184.1 133 69.9
RcHm_v2.0_Chr2g0096661 Rosa chinensis HOM05D006312 ORTHO05D007843 1.3e-44 183.7 131 73.3
Lsat_1_v5_gn_3_68340 Lactuca sativa HOM05D006312 ORTHO05D007843 2.2e-44 183.0 136 69.9
Aqoxy6G03048 Aquilegia oxysepala HOM05D006312 ORTHO05D007843 2.8e-44 182.6 194 54.1
Phvul.001G155800 Phaseolus vulgaris HOM05D006312 ORTHO05D007843 3.7e-44 182.2 142 65.5
Sed0011609 Sechium edule HOM05D006312 ORTHO05D007843 3.7e-44 182.2 151 62.9
Cpa.g.sc178.37 Carica papaya HOM05D006312 ORTHO05D007843 4.9e-44 181.8 192 54.7
Glyma.19G160500 Glycine max HOM05D006312 ORTHO05D007843 8.3e-44 181.0 138 67.4
TAR376G0343 Trochodendron aralioides HOM05D006312 ORTHO05D007843 1.1e-43 180.6 132 69.7
CANSAT21G2119 Cannabis sativa HOM05D006312 ORTHO05D007843 1.4e-43 180.3 147 63.3
Actinidia28758 Actinidia chinensis HOM05D006312 ORTHO05D007843 2.4e-43 179.5 136 69.9
Actinidia35692 Actinidia chinensis HOM05D006312 ORTHO05D007843 2.4e-43 179.5 136 68.4
EL10Ac2g02752 Beta vulgaris HOM05D006312 ORTHO05D007843 3.1e-43 179.1 119 75.6
MELO3C007014.2 Cucumis melo HOM05D006312 ORTHO05D007843 3.1e-43 179.1 167 57.5
AUR62032612 Chenopodium quinoa HOM05D006312 ORTHO05D007843 4.1e-43 178.7 121 74.4
CsaV3_6G052950 Cucumis sativus L. HOM05D006312 ORTHO05D007843 7.0e-43 177.9 167 57.5
TPR.G19116 Trifolium pratense HOM05D006312 ORTHO05D007843 7.0e-43 177.9 132 68.9
AUR62031725 Chenopodium quinoa HOM05D006312 ORTHO05D007843 1.2e-42 177.2 121 72.7
Hma1.2p1_0034F.1_g021580 Hydrangea macrophylla HOM05D006312 ORTHO05D007843 1.2e-42 177.2 136 68.4
HPP92_005603 Vanilla planifolia HOM05D006312 ORTHO05D007843 1.2e-42 177.2 196 53.1
Potri.011G146200 Populus trichocarpa HOM05D006312 ORTHO05D007843 2.7e-42 176.0 111 76.6
ATR0605G230 Amborella trichopoda HOM05D006312 ORTHO05D007843 3.5e-42 175.6 127 70.1
Lj1g0018795 Lotus japonicus HOM05D006312 ORTHO05D007843 3.5e-42 175.6 130 67.7
DCAR_016700 Daucus carota HOM05D006312 ORTHO05D007843 4.5e-42 175.3 140 66.4
ClCG01G025710 Citrullus lanatus HOM05D006312 ORTHO05D007843 7.7e-42 174.5 178 53.9
CAN.G883.25 Capsicum annuum HOM05D006312 ORTHO05D007843 1.0e-41 174.1 193 54.4
Cc07_g12330 Coffea canephora HOM05D006312 ORTHO05D007843 1.0e-41 174.1 138 65.9
PSO675G2564 Papaver somniferum HOM05D006312 ORTHO05D007843 1.0e-41 174.1 146 63.7
FAN19G0451 Fragaria x ananassa HOM05D006312 ORTHO05D007843 1.3e-41 173.7 149 63.8
QL06p053470 Quercus lobata HOM05D006312 ORTHO05D007843 1.7e-41 173.3 111 75.7
Cfa007119 Carpinus fangiana HOM05D006312 ORTHO05D007843 2.3e-41 172.9 132 67.4
PSO541G2566 Papaver somniferum HOM05D006312 ORTHO05D007843 2.9e-41 172.6 134 66.4
ECA246G0189 Erigeron canadensis HOM05D006312 ORTHO05D007843 3.8e-41 172.2 119 73.9
Nitab4.5_0003141g0020 Nicotiana tabacum HOM05D006312 ORTHO05D007843 6.6e-41 171.4 129 69.0
Nitab4.5_0003878g0040 Nicotiana tabacum HOM05D006312 ORTHO05D007843 6.6e-41 171.4 129 69.0
FAN23G3058 Fragaria x ananassa HOM05D006312 ORTHO05D007843 8.6e-41 171.0 149 63.1
FAN28G0218 Fragaria x ananassa HOM05D006312 ORTHO05D007843 1.1e-40 170.6 149 63.1
FvH4_1g09790 Fragaria vesca HOM05D006312 ORTHO05D007843 1.5e-40 170.2 148 62.8
FAN23G0139 Fragaria x ananassa HOM05D006312 ORTHO05D007843 1.5e-40 170.2 149 62.4
FAN26G2993 Fragaria x ananassa HOM05D006312 ORTHO05D007843 1.5e-40 170.2 149 62.4
HanXRQChr16g0532211 Helianthus annuus HOM05D006312 ORTHO05D007843 2.5e-40 169.5 132 66.7
SEGI_12518 Sequoiadendron giganteum HOM05D006312 ORTHO05D007843 3.3e-40 169.1 133 63.2
Solyc02g068270.4 Solanum lycopersicum HOM05D006312 ORTHO05D007843 1.6e-39 166.8 140 62.1
Sopen02g017370 Solanum pennellii HOM05D006312 ORTHO05D007843 1.6e-39 166.8 140 62.1
Oeu024786.1 Olea europaea HOM05D006312 ORTHO05D007843 3.6e-39 165.6 141 65.2
Peaxi162Scf00981g00214 Petunia axillaris HOM05D006312 ORTHO05D007843 3.6e-39 165.6 131 64.1
FAN23G0893 Fragaria x ananassa HOM05D006312 ORTHO05D007843 8.0e-39 164.5 108 76.9
SGA_v2.0_scaffold132G34566 Striga asiatica HOM05D006312 ORTHO05D007843 1.0e-38 164.1 136 63.2
Medtr7g095930 Medicago truncatula HOM05D006312 ORTHO05D007843 2.3e-38 162.9 129 65.1
Dinv24398 Davidia involucrata HOM05D006312 ORTHO05D007843 8.9e-38 161.0 124 63.7
Dinv28290 Davidia involucrata HOM05D006312 ORTHO05D007843 8.9e-38 161.0 124 63.7
SalBow5G1176 Salvia bowleyana HOM05D006312 ORTHO05D007843 8.9e-38 161.0 121 67.8
CiPaw.08G182900 Carya illinoinensis HOM05D006312 ORTHO05D007843 2.0e-37 159.8 138 61.6
Migut.K01209 Erythranthe guttata HOM05D006312 ORTHO05D007843 2.6e-37 159.5 140 62.9
MSTRG.3652 Avicennia marina HOM05D006312 ORTHO05D007843 3.4e-37 159.1 133 63.2
CDE07G0026 Ceratophyllum demersum HOM05D006312 ORTHO05D007843 1.7e-36 156.8 170 55.3
Lalb_Chr01g0019941 Lupinus albus HOM05D006312 ORTHO05D007843 1.8e-35 153.3 180 49.4
Zm00001eb291320 Zea mays HOM05D006312 ORTHO05D007843 4.1e-35 152.1 128 59.4
Os05g0490900 Oryza sativa ssp. japonica HOM05D006312 ORTHO05D007843 9.2e-35 151.0 132 60.6
MD15G1226900 Malus domestica HOM05D006312 ORTHO05D007843 1.6e-34 150.2 138 60.1
vmacro18480 Vaccinium macrocarpon HOM05D006312 ORTHO05D007843 2.0e-34 149.8 152 60.5
GSVIVG01026613001 Vitis vinifera HOM05D006312 ORTHO05D007843 3.0e-33 146.0 86 79.1
SMO356G0733 Selaginella moellendorffii HOM05D006312 ORTHO05D007843 4.3e-32 142.1 112 60.7
Ah.12g058670 Amaranthus hybridus HOM05D006312 ORTHO05D007843 7.3e-32 141.4 96 75.0
Nn6g34643 Nelumbo nucifera HOM05D006312 ORTHO05D007843 7.3e-32 141.4 166 50.0
CBR_g16852 Chara braunii HOM05D006312 ORTHO05D007843 6.2e-31 138.3 112 60.7
Lj2A507T48 Lonicera japonica HOM05D006312 ORTHO05D007843 8.0e-31 137.9 115 64.3
AagrBONN_evm.TU.Sc2ySwM_117.3170 Anthoceros agrestis HOM05D006312 ORTHO05D007843 5.2e-30 135.2 172 44.8
AUR62037337 Chenopodium quinoa HOM05D006312 ORTHO05D007843 2.0e-29 133.3 99 70.7
Haze_03648 Corylus avellana HOM05D006312 ORTHO05D007843 4.4e-29 132.1 108 64.8
Hma1.2p1_0034F.1_g021590 Hydrangea macrophylla HOM05D006312 ORTHO05D007843 7.5e-29 131.3 108 65.7
unitig_748.g7258 Utricularia gibba HOM05D006312 ORTHO05D007843 1.7e-28 130.2 134 54.5
Aa31LG10G3290 Aethionema arabicum HOM05D001371 ORTHO05D001319 4.1e-27 125.6 128 56.2
Mapoly0072s0008 Marchantia polymorpha HOM05D006312 ORTHO05D007843 1.3e-25 120.6 118 49.2
Pp3c12_25230 Physcomitrium patens HOM05D006312 ORTHO05D007843 3.3e-24 115.9 125 44.8
Cre16.g679300 Chlamydomonas reinhardtii HOM05D006312 ORTHO05D007843 7.3e-16 88.2 122 39.3
MCO03G312 Micromonas commoda HOM05D006312 ORTHO05D007843 4.0e-14 82.4 100 45.0
CSS0018042 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 7.6e-13 78.2 76 51.3
CSS0013138 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 5.6e-08 62.0 61 50.8
PRCOL_00002065 Prasinoderma coloniale HOM05D006312 ORTHO05D007843 1.6e-07 60.5 81 46.9


User provided reference genes

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