Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p43610 Brassica napus HOM05D009838 ORTHO05D012149 1.4e-83 313.5 239 100.0
BraA09t39822Z Brassica rapa HOM05D009838 ORTHO05D012149 8.9e-83 310.8 239 99.6
C08p25630 Brassica napus HOM05D009838 ORTHO05D012149 9.2e-80 300.8 239 97.5
BolC8t50182H Brassica oleracea HOM05D009838 ORTHO05D012149 9.5e-77 290.8 239 91.6
BcaC07g39518 Brassica carinata HOM05D009838 ORTHO05D012149 1.5e-74 283.5 235 86.8
BcaB01g00608 Brassica carinata HOM05D009838 ORTHO05D012149 8.3e-73 277.7 242 89.3
Sp5g11640 Schrenkiella parvula HOM05D009838 ORTHO05D012149 1.1e-56 224.2 236 68.2
Thhalv10011140m.g Eutrema salsugineum HOM05D009838 ORTHO05D012149 3.5e-55 219.2 239 69.0
AT3G50570 Arabidopsis thaliana HOM05D009838 ORTHO05D012149 3.6e-52 209.1 235 61.7
CARHR160080 Cardamine hirsuta HOM05D009838 ORTHO05D012149 1.1e-51 207.6 239 62.8
AL5G30720 Arabidopsis lyrata HOM05D009838 ORTHO05D012149 1.2e-50 204.1 235 59.6
Carub.0005s1689 Capsella rubella HOM05D009838 ORTHO05D012149 7.6e-50 201.4 235 60.9
Aa31LG4G18740 Aethionema arabicum HOM05D009838 ORTHO05D012149 1.9e-32 143.7 216 63.9
Thhalv10012327m.g Eutrema salsugineum HOM05D009838 ORTHO05D012149 1.8e-27 127.1 251 59.4
AL1G52260 Arabidopsis lyrata HOM05D009838 ORTHO05D012149 2.4e-27 126.7 234 58.1
Carub.0001s3514 Capsella rubella HOM05D009838 ORTHO05D012149 9.0e-27 124.8 82 67.1
CARHR035890 Cardamine hirsuta HOM05D009838 ORTHO05D012149 1.5e-26 124.0 86 66.3
AT1G44224 Arabidopsis thaliana HOM05D009838 ORTHO05D012149 1.3e-25 120.9 238 52.5
Sp1g33500 Schrenkiella parvula HOM05D009838 ORTHO05D012149 1.1e-24 117.9 85 62.4
A01p24030 Brassica napus HOM05D009838 ORTHO05D012149 2.4e-19 100.1 68 70.6
BraA01t02313Z Brassica rapa HOM05D009838 ORTHO05D012149 4.0e-19 99.4 77 66.2
C01p29720 Brassica napus HOM05D009838 ORTHO05D012149 1.9e-13 80.5 49 77.6
BolC1t02912H Brassica oleracea HOM05D009838 ORTHO05D012149 1.9e-13 80.5 49 77.6
THA.LOC104806833 Tarenaya hassleriana HOM05D009838 ORTHO05D012149 2.8e-12 76.6 94 38.3
Thhalv10011704m.g Eutrema salsugineum HOM05D009838 ORTHO05D195974 5.9e-10 68.9 46 63.0


User provided reference genes

Program Settings