Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p43530 Brassica napus HOM05D008738 ORTHO05D010755 9.6e-105 383.6 214 100.0
BraA09t39817Z Brassica rapa HOM05D008738 ORTHO05D010755 2.3e-98 362.5 216 95.4
BcaC07g39511 Brassica carinata HOM05D008738 ORTHO05D010755 4.3e-97 358.2 216 90.7
C08p25550 Brassica napus HOM05D008738 ORTHO05D010755 6.3e-96 354.4 216 89.8
BraA09t39816Z Brassica rapa HOM05D008738 ORTHO05D010755 1.1e-95 353.6 217 90.8
A09p43510 Brassica napus HOM05D008738 ORTHO05D010755 2.5e-92 342.4 217 88.5
BolC8t50176H Brassica oleracea HOM05D008738 ORTHO05D010755 2.5e-92 342.4 216 87.0
BraA09t39815Z Brassica rapa HOM05D008738 ORTHO05D010755 2.7e-83 312.4 219 80.8
A09p43500 Brassica napus HOM05D008738 ORTHO05D010755 3.6e-83 312.0 219 80.8
BcaC07g39509 Brassica carinata HOM05D008738 ORTHO05D010755 6.1e-83 311.2 219 80.8
A09p43550 Brassica napus HOM05D008738 ORTHO05D010755 1.1e-81 307.0 216 80.1
BcaB01g00614 Brassica carinata HOM05D008738 ORTHO05D010755 3.7e-80 302.0 217 79.7
BcaB01g00613 Brassica carinata HOM05D008738 ORTHO05D010755 5.7e-73 278.1 216 73.1
AT3G50470 Arabidopsis thaliana HOM05D008738 ORTHO05D010755 4.1e-71 271.9 216 72.7
AL5G30620 Arabidopsis lyrata HOM05D008738 ORTHO05D010755 8.5e-69 264.2 216 71.3
Carub.0005s1680 Capsella rubella HOM05D008738 ORTHO05D010755 4.7e-67 258.5 218 68.8
Thhalv10010714m.g Eutrema salsugineum HOM05D008738 ORTHO05D010755 4.7e-67 258.5 216 69.4
CARHR159990 Cardamine hirsuta HOM05D008738 ORTHO05D010755 3.8e-61 238.8 216 64.4
AT3G50460 Arabidopsis thaliana HOM05D008738 ORTHO05D010755 1.1e-52 210.7 214 59.8
AL5G30610 Arabidopsis lyrata HOM05D008738 ORTHO05D010755 4.2e-52 208.8 213 59.6
CARHR159980 Cardamine hirsuta HOM05D008738 ORTHO05D010755 7.2e-52 208.0 212 57.1
BcaC06g33094 Brassica carinata HOM05D008738 ORTHO05D010755 1.2e-51 207.2 211 57.8
C08p25540 Brassica napus HOM05D008738 ORTHO05D010755 1.2e-51 207.2 154 78.6
Carub.0005s1679 Capsella rubella HOM05D008738 ORTHO05D010755 3.6e-51 205.7 198 59.6
AL5G30600 Arabidopsis lyrata HOM05D008738 ORTHO05D010755 5.2e-50 201.8 212 57.5
Aa31LG4G18690 Aethionema arabicum HOM05D008738 ORTHO05D010755 8.8e-50 201.1 217 57.6
A03p47800 Brassica napus HOM05D008738 ORTHO05D010755 1.1e-47 194.1 215 58.6
BraA03t13890Z Brassica rapa HOM05D008738 ORTHO05D010755 1.1e-47 194.1 215 58.6
AL5G30630 Arabidopsis lyrata HOM05D008738 ORTHO05D010755 1.9e-44 183.3 215 54.4
AT3G50450 Arabidopsis thaliana HOM05D008738 ORTHO05D010755 4.3e-44 182.2 216 50.9
Aa31LG4G18680 Aethionema arabicum HOM05D008738 ORTHO05D010755 1.6e-22 110.5 149 43.0
BcaB01g00612 Brassica carinata HOM05D008738 ORTHO05D010755 3.6e-19 99.4 143 46.2
BcaC06g33093 Brassica carinata HOM05D008738 ORTHO05D010755 4.1e-15 85.9 144 42.4
AT3G50480 Arabidopsis thaliana HOM05D008738 ORTHO05D010755 4.0e-10 69.3 139 38.8
PSO210G7782 Papaver somniferum HOM05D000033 ORTHO05D030421 3.4e-09 66.2 139 27.3
C07p45760 Brassica napus HOM05D008738 ORTHO05D010755 3.8e-08 62.8 85 48.2
Dinv39897 Davidia involucrata HOM05D000529 ORTHO05D000472 9.3e-07 58.2 137 32.1
TAR381G0813 Trochodendron aralioides HOM05D000529 ORTHO05D000472 6.0e-06 55.5 140 28.6


User provided reference genes

Program Settings