Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p43510 Brassica napus HOM05D008738 ORTHO05D010755 5.3e-111 404.4 217 100.0
BraA09t39816Z Brassica rapa HOM05D008738 ORTHO05D010755 3.1e-103 378.6 217 94.9
BcaC07g39511 Brassica carinata HOM05D008738 ORTHO05D010755 8.8e-98 360.5 217 90.8
C08p25550 Brassica napus HOM05D008738 ORTHO05D010755 1.8e-95 352.8 217 89.9
BolC8t50176H Brassica oleracea HOM05D008738 ORTHO05D010755 5.0e-93 344.7 217 87.6
BraA09t39817Z Brassica rapa HOM05D008738 ORTHO05D010755 5.0e-93 344.7 217 88.9
A09p43530 Brassica napus HOM05D008738 ORTHO05D010755 2.1e-91 339.3 217 88.5
BraA09t39815Z Brassica rapa HOM05D008738 ORTHO05D010755 1.1e-84 317.0 219 82.2
A09p43500 Brassica napus HOM05D008738 ORTHO05D010755 1.5e-84 316.6 219 82.2
A09p43550 Brassica napus HOM05D008738 ORTHO05D010755 2.5e-84 315.8 217 82.9
BcaC07g39509 Brassica carinata HOM05D008738 ORTHO05D010755 7.3e-84 314.3 219 81.3
BcaB01g00614 Brassica carinata HOM05D008738 ORTHO05D010755 5.8e-81 304.7 217 77.9
BcaB01g00613 Brassica carinata HOM05D008738 ORTHO05D010755 3.1e-74 282.3 217 71.9
AT3G50470 Arabidopsis thaliana HOM05D008738 ORTHO05D010755 5.8e-73 278.1 217 73.3
AL5G30620 Arabidopsis lyrata HOM05D008738 ORTHO05D010755 3.2e-71 272.3 217 71.9
Carub.0005s1680 Capsella rubella HOM05D008738 ORTHO05D010755 3.0e-69 265.8 217 69.6
Thhalv10010714m.g Eutrema salsugineum HOM05D008738 ORTHO05D010755 1.8e-66 256.5 217 69.1
CARHR159990 Cardamine hirsuta HOM05D008738 ORTHO05D010755 3.3e-60 235.7 217 62.7
AT3G50460 Arabidopsis thaliana HOM05D008738 ORTHO05D010755 1.6e-54 216.9 215 60.0
AL5G30610 Arabidopsis lyrata HOM05D008738 ORTHO05D010755 4.6e-54 215.3 215 58.6
C08p25540 Brassica napus HOM05D008738 ORTHO05D010755 2.3e-53 213.0 154 79.9
CARHR159980 Cardamine hirsuta HOM05D008738 ORTHO05D010755 2.3e-53 213.0 214 57.0
AL5G30600 Arabidopsis lyrata HOM05D008738 ORTHO05D010755 1.3e-51 207.2 214 57.5
Carub.0005s1679 Capsella rubella HOM05D008738 ORTHO05D010755 1.3e-51 207.2 199 59.3
BcaC06g33094 Brassica carinata HOM05D008738 ORTHO05D010755 1.1e-50 204.1 211 58.3
Aa31LG4G18690 Aethionema arabicum HOM05D008738 ORTHO05D010755 1.5e-49 200.3 218 53.7
A03p47800 Brassica napus HOM05D008738 ORTHO05D010755 3.5e-46 189.1 213 58.2
BraA03t13890Z Brassica rapa HOM05D008738 ORTHO05D010755 3.5e-46 189.1 213 58.2
AL5G30630 Arabidopsis lyrata HOM05D008738 ORTHO05D010755 4.6e-46 188.7 216 54.6
AT3G50450 Arabidopsis thaliana HOM05D008738 ORTHO05D010755 1.8e-45 186.8 217 50.7
Aa31LG4G18680 Aethionema arabicum HOM05D008738 ORTHO05D010755 5.0e-24 115.5 149 42.3
BcaB01g00612 Brassica carinata HOM05D008738 ORTHO05D010755 9.7e-20 101.3 143 45.5
BcaC06g33093 Brassica carinata HOM05D008738 ORTHO05D010755 4.1e-18 95.9 144 42.4
AT3G50480 Arabidopsis thaliana HOM05D008738 ORTHO05D010755 5.7e-12 75.5 139 36.0
PSO210G7782 Papaver somniferum HOM05D000033 ORTHO05D030421 7.7e-09 65.1 154 24.7
Haze_15455 Corylus avellana HOM05D008738 ORTHO05D010755 1.0e-08 64.7 136 27.2
C07p45760 Brassica napus HOM05D008738 ORTHO05D010755 2.9e-08 63.2 84 48.8
Cfa003965 Carpinus fangiana HOM05D008738 ORTHO05D010755 8.5e-08 61.6 135 24.4
Dinv39897 Davidia involucrata HOM05D000529 ORTHO05D000472 1.2e-06 57.8 137 30.7
Prupe.7G140100 Prunus persica HOM05D008738 ORTHO05D010755 1.6e-06 57.4 141 27.7
Manes.12G094400 Manihot esculenta HOM05D058365 ORTHO05D010755 2.1e-06 57.0 211 29.4
CiPaw.02G011200 Carya illinoinensis HOM05D008738 ORTHO05D010755 3.6e-06 56.2 139 28.1
Gohir.D03G020050 Gossypium hirsutum HOM05D015225 ORTHO05D009609 6.1e-06 55.5 132 32.6
Gorai.003G021200 Gossypium raimondii HOM05D015225 ORTHO05D009609 6.1e-06 55.5 132 32.6
TAR381G0813 Trochodendron aralioides HOM05D000529 ORTHO05D000472 6.1e-06 55.5 140 27.1
CiPaw.02G010900 Carya illinoinensis HOM05D008738 ORTHO05D010755 7.9e-06 55.1 139 27.3


User provided reference genes

Program Settings