Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p43500 Brassica napus HOM05D008738 ORTHO05D010755 1.2e-110 403.3 213 100.0
BraA09t39815Z Brassica rapa HOM05D008738 ORTHO05D010755 3.8e-109 398.3 213 98.6
BcaC07g39509 Brassica carinata HOM05D008738 ORTHO05D010755 2.2e-101 372.5 213 93.0
BolC8t50176H Brassica oleracea HOM05D008738 ORTHO05D010755 3.0e-90 335.5 219 84.0
BcaC07g39511 Brassica carinata HOM05D008738 ORTHO05D010755 3.9e-90 335.1 219 84.5
C08p25550 Brassica napus HOM05D008738 ORTHO05D010755 8.1e-88 327.4 219 83.6
BcaB01g00614 Brassica carinata HOM05D008738 ORTHO05D010755 4.5e-86 321.6 219 80.4
BraA09t39816Z Brassica rapa HOM05D008738 ORTHO05D010755 1.0e-85 320.5 219 81.7
A09p43510 Brassica napus HOM05D008738 ORTHO05D010755 1.3e-85 320.1 219 82.2
A09p43530 Brassica napus HOM05D008738 ORTHO05D010755 1.2e-83 313.5 219 80.8
BraA09t39817Z Brassica rapa HOM05D008738 ORTHO05D010755 1.6e-80 303.1 219 78.1
BcaB01g00613 Brassica carinata HOM05D008738 ORTHO05D010755 4.8e-80 301.6 215 75.8
AT3G50470 Arabidopsis thaliana HOM05D008738 ORTHO05D010755 1.1e-76 290.4 218 73.4
AL5G30620 Arabidopsis lyrata HOM05D008738 ORTHO05D010755 2.1e-75 286.2 218 72.9
Carub.0005s1680 Capsella rubella HOM05D008738 ORTHO05D010755 3.9e-74 282.0 218 71.1
A09p43550 Brassica napus HOM05D008738 ORTHO05D010755 9.7e-73 277.3 219 73.5
Thhalv10010714m.g Eutrema salsugineum HOM05D008738 ORTHO05D010755 9.0e-71 270.8 218 70.2
C08p25540 Brassica napus HOM05D008738 ORTHO05D010755 2.2e-69 266.2 148 95.3
CARHR159990 Cardamine hirsuta HOM05D008738 ORTHO05D010755 1.4e-66 256.9 218 66.5
AT3G50460 Arabidopsis thaliana HOM05D008738 ORTHO05D010755 1.4e-58 230.3 219 59.8
CARHR159980 Cardamine hirsuta HOM05D008738 ORTHO05D010755 1.4e-58 230.3 211 59.7
AL5G30610 Arabidopsis lyrata HOM05D008738 ORTHO05D010755 1.1e-57 227.3 213 58.7
AL5G30600 Arabidopsis lyrata HOM05D008738 ORTHO05D010755 5.7e-57 224.9 210 60.0
Aa31LG4G18690 Aethionema arabicum HOM05D008738 ORTHO05D010755 1.6e-54 216.9 214 57.5
BcaC06g33094 Brassica carinata HOM05D008738 ORTHO05D010755 2.0e-54 216.5 212 60.4
Carub.0005s1679 Capsella rubella HOM05D008738 ORTHO05D010755 4.5e-54 215.3 200 59.5
A03p47800 Brassica napus HOM05D008738 ORTHO05D010755 1.7e-53 213.4 214 60.7
BraA03t13890Z Brassica rapa HOM05D008738 ORTHO05D010755 1.7e-53 213.4 214 60.7
AT3G50450 Arabidopsis thaliana HOM05D008738 ORTHO05D010755 1.2e-51 207.2 213 54.5
AL5G30630 Arabidopsis lyrata HOM05D008738 ORTHO05D010755 2.3e-50 203.0 217 56.7
Aa31LG4G18680 Aethionema arabicum HOM05D008738 ORTHO05D010755 6.1e-27 125.2 140 47.9
BcaB01g00612 Brassica carinata HOM05D008738 ORTHO05D010755 1.6e-22 110.5 143 49.0
BcaC06g33093 Brassica carinata HOM05D008738 ORTHO05D010755 1.5e-20 104.0 144 44.4
AT3G50480 Arabidopsis thaliana HOM05D008738 ORTHO05D010755 1.6e-11 73.9 139 36.0
C07p45760 Brassica napus HOM05D008738 ORTHO05D010755 6.8e-10 68.6 85 50.6
PSO210G7782 Papaver somniferum HOM05D000033 ORTHO05D030421 1.5e-09 67.4 139 27.3
Dinv39897 Davidia involucrata HOM05D000529 ORTHO05D000472 3.4e-09 66.2 139 30.9
Manes.12G094400 Manihot esculenta HOM05D058365 ORTHO05D010755 2.2e-08 63.5 209 29.2
Cfa003965 Carpinus fangiana HOM05D008738 ORTHO05D010755 3.7e-08 62.8 135 25.9
Haze_15455 Corylus avellana HOM05D008738 ORTHO05D010755 3.7e-08 62.8 136 27.2
TAR381G0813 Trochodendron aralioides HOM05D000529 ORTHO05D000472 8.3e-08 61.6 140 29.3
Oeu036816.1 Olea europaea HOM05D000529 ORTHO05D036481 1.1e-07 61.2 142 26.8
CiPaw.02G010900 Carya illinoinensis HOM05D008738 ORTHO05D010755 1.9e-07 60.5 141 27.0
Nn5g29351 Nelumbo nucifera HOM05D000529 ORTHO05D000472 1.9e-07 60.5 136 27.9
TWI09G1247 Tripterygium wilfordii HOM05D000529 ORTHO05D000472 9.2e-07 58.2 167 25.7
CiPaw.02G011200 Carya illinoinensis HOM05D008738 ORTHO05D010755 1.2e-06 57.8 140 27.1
Duzib147G1638 Durio zibethinus HOM05D000529 ORTHO05D000472 1.2e-06 57.8 137 29.2
Haze_15456 Corylus avellana HOM05D008738 ORTHO05D010755 1.6e-06 57.4 132 24.2
Oeu005309.1 Olea europaea HOM05D000529 ORTHO05D000472 2.1e-06 57.0 140 25.7
Prupe.7G140100 Prunus persica HOM05D008738 ORTHO05D010755 2.1e-06 57.0 135 30.4
Manes.12G094300 Manihot esculenta HOM05D058365 ORTHO05D010755 2.7e-06 56.6 203 29.1
MD02G1163800 Malus domestica HOM05D008738 ORTHO05D010755 4.6e-06 55.8 130 30.0
Nn5g29352 Nelumbo nucifera HOM05D000529 ORTHO05D000472 4.6e-06 55.8 144 27.1
Prupe.5G127600 Prunus persica HOM05D000529 ORTHO05D010311 4.6e-06 55.8 141 26.2
CSS0009502 Camellia sinensis var. sinensis HOM05D000529 ORTHO05D000472 7.8e-06 55.1 142 26.8
Cc07_g05690 Coffea canephora HOM05D000529 ORTHO05D010311 7.8e-06 55.1 136 27.9
vmacro17917 Vaccinium macrocarpon HOM05D000529 ORTHO05D000472 7.8e-06 55.1 142 28.2


User provided reference genes

Program Settings