Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p40810 Brassica napus HOM05D006231 ORTHO05D007857 1.6e-162 576.2 328 100.0
BraA09t39576Z Brassica rapa HOM05D006231 ORTHO05D007857 1.0e-161 573.5 328 99.1
BcaB07g32378 Brassica carinata HOM05D006231 ORTHO05D007857 1.8e-150 536.2 331 87.9
BcaC05g26301 Brassica carinata HOM05D006231 ORTHO05D007857 2.2e-148 529.3 330 89.4
BolC5t31019H Brassica oleracea HOM05D006231 ORTHO05D007857 2.2e-148 529.3 330 89.4
C05p23180 Brassica napus HOM05D006231 ORTHO05D007857 5.0e-145 518.1 328 87.5
Thhalv10008192m.g Eutrema salsugineum HOM05D006231 ORTHO05D007857 6.1e-135 484.6 326 80.1
Sp1g21370 Schrenkiella parvula HOM05D006231 ORTHO05D007857 6.1e-135 484.6 330 80.0
AL1G37790 Arabidopsis lyrata HOM05D006231 ORTHO05D007857 3.6e-127 458.8 331 75.8
AT1G24040 Arabidopsis thaliana HOM05D006231 ORTHO05D007857 4.4e-125 451.8 332 74.4
CARHR024340 Cardamine hirsuta HOM05D006231 ORTHO05D007857 4.4e-125 451.8 339 74.3
Carub.0001s2346 Capsella rubella HOM05D006231 ORTHO05D007857 4.1e-123 445.3 334 75.4
Aa31LG7G7830 Aethionema arabicum HOM05D006231 ORTHO05D007857 1.1e-112 410.6 334 69.2
THA.LOC104822056 Tarenaya hassleriana HOM05D006231 ORTHO05D007857 1.7e-105 386.7 335 65.1
THA.LOC104822957 Tarenaya hassleriana HOM05D006231 ORTHO05D007857 3.4e-101 372.5 298 67.8
Manes.01G197500 Manihot esculenta HOM05D006231 ORTHO05D007857 9.6e-88 327.8 218 73.4
Atru.chr11.1975 Acer truncatum HOM05D006231 ORTHO05D007857 1.4e-86 323.9 325 56.3
Ciclev10032202m.g Citrus clementina HOM05D006231 ORTHO05D007857 9.9e-85 317.8 296 59.5
Haze_12158 Corylus avellana HOM05D006231 ORTHO05D007857 6.4e-84 315.1 262 61.1
Gorai.009G344200 Gossypium raimondii HOM05D006231 ORTHO05D007857 6.4e-84 315.1 267 62.5
CiPaw.05G148900 Carya illinoinensis HOM05D006231 ORTHO05D007857 1.4e-83 313.9 214 70.6
QL03p062170 Quercus lobata HOM05D006231 ORTHO05D007857 1.9e-83 313.5 245 63.7
Gohir.D05G320900 Gossypium hirsutum HOM05D006231 ORTHO05D007857 7.1e-83 311.6 267 62.5
Thecc.02G247800 Theobroma cacao HOM05D006231 ORTHO05D007857 1.2e-82 310.8 296 56.4
Lalb_Chr09g0326451 Lupinus albus HOM05D006231 ORTHO05D007857 1.6e-82 310.5 210 68.6
Cfa009127 Carpinus fangiana HOM05D006231 ORTHO05D007857 6.0e-82 308.5 304 55.9
MD16G1088300 Malus domestica HOM05D006231 ORTHO05D007857 7.9e-82 308.1 280 61.1
COL.COLO4_19536 Corchorus olitorius HOM05D006231 ORTHO05D007857 1.3e-81 307.4 332 53.9
CsaV3_5G031780 Cucumis sativus L. HOM05D006231 ORTHO05D007857 2.3e-81 306.6 288 56.9
TWI36G0577 Tripterygium wilfordii HOM05D006231 ORTHO05D007857 3.9e-81 305.8 221 67.9
MELO3C012017.2 Cucumis melo HOM05D006231 ORTHO05D007857 1.1e-80 304.3 288 57.3
RcHm_v2.0_Chr4g0444351 Rosa chinensis HOM05D006231 ORTHO05D007857 1.1e-80 304.3 238 62.6
ClCG05G025120 Citrullus lanatus HOM05D006231 ORTHO05D007857 1.5e-80 303.9 290 58.3
Potri.008G146000 Populus trichocarpa HOM05D006231 ORTHO05D007857 2.5e-80 303.1 251 58.6
Sed0009573 Sechium edule HOM05D006231 ORTHO05D007857 3.3e-80 302.8 242 64.0
Eucgr.B02548 Eucalyptus grandis HOM05D006231 ORTHO05D007857 5.6e-80 302.0 264 61.4
Gohir.A05G318600 Gossypium hirsutum HOM05D006231 ORTHO05D007857 9.6e-80 301.2 267 60.7
Prupe.1G258300 Prunus persica HOM05D006231 ORTHO05D007857 9.6e-80 301.2 253 60.5
arahy.Tifrunner.gnm1.ann1.FQS9XH Arachis hypogaea HOM05D006231 ORTHO05D007857 1.3e-79 300.8 211 64.5
PGR119G0912 Punica granatum HOM05D006231 ORTHO05D007857 1.3e-79 300.8 249 60.2
arahy.Tifrunner.gnm1.ann1.XK2UET Arachis hypogaea HOM05D006231 ORTHO05D007857 3.7e-79 299.3 211 64.0
FvH4_4g34910 Fragaria vesca HOM05D006231 ORTHO05D007857 3.7e-79 299.3 238 61.3
FAN12G2615 Fragaria x ananassa HOM05D006231 ORTHO05D007857 3.7e-79 299.3 238 61.3
Dinv24894 Davidia involucrata HOM05D006231 ORTHO05D007857 8.1e-79 298.1 283 55.5
Duzib248G0169 Durio zibethinus HOM05D006231 ORTHO05D007857 1.1e-78 297.7 299 56.2
CANSAT01G1818 Cannabis sativa HOM05D006231 ORTHO05D007857 1.8e-78 297.0 208 68.8
Gohir.D02G165000 Gossypium hirsutum HOM05D006231 ORTHO05D007857 4.0e-78 295.8 267 58.1
vmacro16274 Vaccinium macrocarpon HOM05D006231 ORTHO05D007857 2.0e-77 293.5 209 66.5
Nitab4.5_0004963g0030 Nicotiana tabacum HOM05D006231 ORTHO05D007857 4.5e-77 292.4 294 51.7
Potri.010G095800 Populus trichocarpa HOM05D006231 ORTHO05D007857 5.8e-77 292.0 215 63.3
CSS0002380 Camellia sinensis var. sinensis HOM05D006231 ORTHO05D007857 1.0e-76 291.2 240 58.8
CSS0044234 Camellia sinensis var. sinensis HOM05D006231 ORTHO05D007857 1.0e-76 291.2 240 58.8
PGSC0003DMG400004132 Solanum tuberosum HOM05D006231 ORTHO05D007857 1.0e-76 291.2 209 64.6
Nitab4.5_0001474g0130 Nicotiana tabacum HOM05D006231 ORTHO05D007857 1.3e-76 290.8 290 52.1
MD13G1088000 Malus domestica HOM05D006231 ORTHO05D007857 1.7e-76 290.4 221 64.7
Cc11_g14350 Coffea canephora HOM05D006231 ORTHO05D007857 2.2e-76 290.0 216 64.4
Hma1.2p1_1017F.1_g248270 Hydrangea macrophylla HOM05D006231 ORTHO05D007857 1.4e-75 287.3 252 59.1
FAN22G0458 Fragaria x ananassa HOM05D006231 ORTHO05D007857 1.9e-75 287.0 259 56.4
CAN.G505.18 Capsicum annuum HOM05D006231 ORTHO05D007857 2.5e-75 286.6 204 65.2
Lj2g0015887 Lotus japonicus HOM05D006231 ORTHO05D007857 2.5e-75 286.6 314 53.8
TAR629G0133 Trochodendron aralioides HOM05D006231 ORTHO05D007857 2.5e-75 286.6 211 65.4
MSTRG.613 Avicennia marina HOM05D006231 ORTHO05D007857 9.3e-75 284.6 255 56.9
FAN17G2958 Fragaria x ananassa HOM05D006231 ORTHO05D007857 4.6e-74 282.3 252 57.1
Actinidia15012 Actinidia chinensis HOM05D006231 ORTHO05D007857 6.0e-74 282.0 262 55.3
Aqoxy3G00933 Aquilegia oxysepala HOM05D006231 ORTHO05D007857 6.0e-74 282.0 322 48.8
FAN07G0090 Fragaria x ananassa HOM05D006231 ORTHO05D007857 1.0e-73 281.2 252 56.7
Lsat_1_v5_gn_8_158260 Lactuca sativa HOM05D006231 ORTHO05D007857 3.0e-73 279.6 217 64.5
Sopen05g001920 Solanum pennellii HOM05D006231 ORTHO05D007857 5.1e-73 278.9 295 51.9
Psat2g109920 Pisum sativum HOM05D006231 ORTHO05D007857 6.7e-73 278.5 290 51.0
Ca_04621_v3 Cicer arietinum L. HOM05D006231 ORTHO05D007857 1.1e-72 277.7 206 65.5
Glyma.01G034200 Glycine max HOM05D006231 ORTHO05D007857 8.2e-71 271.6 218 60.1
Nn4g22867 Nelumbo nucifera HOM05D006231 ORTHO05D007857 1.1e-70 271.2 219 60.3
Hund25325 Selenicereus undatus HOM05D006231 ORTHO05D007857 1.4e-70 270.8 280 54.3
Oeu046714.1 Olea europaea HOM05D006231 ORTHO05D007857 1.8e-70 270.4 292 51.0
Peaxi162Scf00421g00419 Petunia axillaris HOM05D006231 ORTHO05D007857 6.9e-70 268.5 290 50.0
SalBow2G0481 Salvia bowleyana HOM05D006231 ORTHO05D007857 3.4e-69 266.2 221 57.9
ECA233G1652 Erigeron canadensis HOM05D006231 ORTHO05D007857 4.5e-69 265.8 224 58.9
EL10Ac6g13629 Beta vulgaris HOM05D006231 ORTHO05D007857 2.2e-68 263.5 243 57.2
AUR62005324 Chenopodium quinoa HOM05D006231 ORTHO05D007857 2.2e-68 263.5 329 47.4
Sabra10G0068400 Salix brachista HOM05D006231 ORTHO05D007857 2.2e-68 263.5 301 48.5
Migut.L01438 Erythranthe guttata HOM05D006231 ORTHO05D007857 2.9e-68 263.1 209 59.8
CSS0037524 Camellia sinensis var. sinensis HOM05D006231 ORTHO05D007857 1.1e-67 261.2 240 53.3
Lj3A1049T58 Lonicera japonica HOM05D006231 ORTHO05D007857 1.4e-67 260.8 234 58.1
HanXRQChr08g0208971 Helianthus annuus HOM05D006231 ORTHO05D007857 1.9e-67 260.4 209 60.8
Medtr5g035060 Medicago truncatula HOM05D006231 ORTHO05D007857 3.2e-67 259.6 265 52.8
TPR.G4354 Trifolium pratense HOM05D006231 ORTHO05D007857 9.3e-67 258.1 218 57.8
unitig_22.g6476 Utricularia gibba HOM05D006231 ORTHO05D007857 1.2e-66 257.7 209 57.4
Rhsim12G0123300 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.6e-66 257.3 289 50.2
AUR62013974 Chenopodium quinoa HOM05D006231 ORTHO05D007857 2.7e-66 256.5 294 50.0
Sc11g0001330 Simmondsia chinensis HOM05D006231 ORTHO05D007857 3.6e-66 256.1 300 48.7
PSO478G5064 Papaver somniferum HOM05D006231 ORTHO05D007857 7.9e-66 255.0 272 53.3
Ah.03g132450 Amaranthus hybridus HOM05D006231 ORTHO05D007857 1.0e-65 254.6 270 52.6
PSO017G5161 Papaver somniferum HOM05D006231 ORTHO05D007857 8.7e-65 251.5 291 47.4
Glyma.02G032100 Glycine max HOM05D006231 ORTHO05D007857 3.3e-64 249.6 257 51.4
VMungo1215G3085 Vigna mungo HOM05D006231 ORTHO05D007857 4.1e-62 242.7 300 45.3
DCAR_024529 Daucus carota HOM05D006231 ORTHO05D007857 3.4e-61 239.6 174 63.8
Sabra08G0111000 Salix brachista HOM05D006231 ORTHO05D007857 4.5e-61 239.2 213 58.2
Phvul.002G073400 Phaseolus vulgaris HOM05D006231 ORTHO05D007857 2.9e-60 236.5 312 44.6
MBI15_g12952_MAGBIO Magnolia biondii HOM05D006231 ORTHO05D007857 1.6e-58 230.7 203 55.7
CDE10G0954 Ceratophyllum demersum HOM05D006231 ORTHO05D007857 3.9e-57 226.1 200 55.0
Gorai.005G184900 Gossypium raimondii HOM05D006231 ORTHO05D007857 8.8e-57 224.9 267 49.1
SGA_v2.0_scaffold166G38349 Striga asiatica HOM05D006231 ORTHO05D007857 4.8e-55 219.2 245 47.3
CDE10G0637 Ceratophyllum demersum HOM05D006231 ORTHO05D007857 7.9e-50 201.8 169 58.0
Gohir.A03G141850 Gossypium hirsutum HOM05D006231 ORTHO05D007857 2.3e-49 200.3 211 53.6
ATR1149G099 Amborella trichopoda HOM05D006231 ORTHO05D007857 8.8e-49 198.4 172 58.1
Medtr5g035040 Medicago truncatula HOM05D006231 ORTHO05D007857 2.2e-47 193.7 207 48.8
HPP92_010904 Vanilla planifolia HOM05D006231 ORTHO05D007857 2.8e-47 193.4 257 43.6
SEGI_07841 Sequoiadendron giganteum HOM05D006231 ORTHO05D007857 8.2e-47 191.8 199 47.7
GSVIVG01020181001 Vitis vinifera HOM05D006231 ORTHO05D007857 1.0e-44 184.9 124 68.5
Psat2g109880 Pisum sativum HOM05D006231 ORTHO05D007857 1.3e-44 184.5 235 46.4
Solyc05g005890.2 Solanum lycopersicum HOM05D006231 ORTHO05D007857 5.5e-43 179.1 125 64.0
Os04g0465500 Oryza sativa ssp. japonica HOM05D006231 ORTHO05D007857 7.2e-43 178.7 218 44.5
SEGI_36756 Sequoiadendron giganteum HOM05D006231 ORTHO05D007857 2.6e-40 170.2 200 42.5
Zm00001eb424460 Zea mays HOM05D006231 ORTHO05D007857 7.5e-40 168.7 220 42.7
Mapoly0005s0071 Marchantia polymorpha HOM05D006231 ORTHO05D007857 1.7e-36 157.5 203 43.3
Pp3c2_6130 Physcomitrium patens HOM05D006231 ORTHO05D007857 3.2e-35 153.3 203 41.9
Pp3c2_6132 Physcomitrium patens HOM05D006231 ORTHO05D007857 3.2e-35 153.3 203 41.9
Zm00001eb348680 Zea mays HOM05D006231 ORTHO05D007857 4.4e-32 142.9 221 38.5
SMO365G0079 Selaginella moellendorffii HOM05D006231 ORTHO05D007857 5.0e-28 129.4 190 36.3
Dinv31098 Davidia involucrata HOM05D006231 ORTHO05D007857 3.4e-24 116.7 97 60.8
AagrBONN_evm.TU.Sc2ySwM_368.2752 Anthoceros agrestis HOM05D006231 ORTHO05D007857 5.4e-22 109.4 173 39.3
CBR_g40430 Chara braunii HOM05D017800 ORTHO05D019665 3.5e-21 106.7 204 33.3
Medtr5g035050 Medicago truncatula HOM05D006231 ORTHO05D007857 1.0e-17 95.1 58 74.1
TAR622G0489 Trochodendron aralioides HOM05D006231 ORTHO05D007857 1.0e-12 78.6 82 51.2
Cre10.g464750 Chlamydomonas reinhardtii HOM05D006231 ORTHO05D007857 8.3e-07 58.9 221 21.7


User provided reference genes

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