Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p40660 Brassica napus HOM05D004683 ORTHO05D005388 7.9e-62 240.4 129 100.0
BcaC09g50454 Brassica carinata HOM05D004683 ORTHO05D005388 2.8e-22 109.0 68 88.2
BcaNung00108 Brassica carinata HOM05D004683 ORTHO05D005388 2.8e-22 109.0 68 88.2
A01p20140 Brassica napus HOM05D004683 ORTHO05D005388 2.8e-22 109.0 68 88.2
C01p25270 Brassica napus HOM05D004683 ORTHO05D005388 2.8e-22 109.0 68 88.2
BolC1t02477H Brassica oleracea HOM05D004683 ORTHO05D005388 2.8e-22 109.0 68 88.2
BraA01t01938Z Brassica rapa HOM05D004683 ORTHO05D005388 2.8e-22 109.0 68 88.2
Sp7g16950 Schrenkiella parvula HOM05D004683 ORTHO05D005388 4.7e-22 108.2 68 88.2
AL7G37470 Arabidopsis lyrata HOM05D004683 ORTHO05D005388 4.9e-19 98.2 68 82.4
Carub.0007s2417 Capsella rubella HOM05D004683 ORTHO05D005388 4.9e-19 98.2 68 82.4
CARHR223850 Cardamine hirsuta HOM05D004683 ORTHO05D005388 8.3e-19 97.4 68 82.4
AT4G17240 Arabidopsis thaliana HOM05D004683 ORTHO05D005388 1.1e-18 97.1 68 80.9
Thhalv10025641m.g Eutrema salsugineum HOM05D004683 ORTHO05D005388 2.7e-17 92.4 68 77.9
Lj2A259T33 Lonicera japonica HOM05D004683 ORTHO05D005388 2.7e-17 92.4 69 76.8
Nitab4.5_0001668g0040 Nicotiana tabacum HOM05D004683 ORTHO05D005388 1.3e-16 90.1 66 74.2
FvH4_3g00551 Fragaria vesca HOM05D004683 ORTHO05D005388 1.7e-16 89.7 71 71.8
Lalb_Chr15g0088101 Lupinus albus HOM05D004683 ORTHO05D005388 1.7e-16 89.7 62 77.4
FAN25G2373 Fragaria x ananassa HOM05D004683 ORTHO05D005388 3.0e-16 89.0 71 71.8
Peaxi162Scf00352g01036 Petunia axillaris HOM05D004683 ORTHO05D005388 3.0e-16 89.0 73 72.6
Prupe.4G006700 Prunus persica HOM05D004683 ORTHO05D005388 3.0e-16 89.0 65 72.3
Lj6g0001835 Lotus japonicus HOM05D004683 ORTHO05D005388 3.9e-16 88.6 64 75.0
RcHm_v2.0_Chr5g0000761 Rosa chinensis HOM05D004683 ORTHO05D005388 3.9e-16 88.6 74 68.9
THA.LOC104806735 Tarenaya hassleriana HOM05D004683 ORTHO05D005388 3.9e-16 88.6 71 70.4
Cc09_g00590 Coffea canephora HOM05D004683 ORTHO05D005388 5.0e-16 88.2 64 78.1
CsaV3_1G015800 Cucumis sativus L. HOM05D004683 ORTHO05D005388 5.0e-16 88.2 64 75.0
CsaV3_UNG061480 Cucumis sativus L. HOM05D004683 ORTHO05D005388 5.0e-16 88.2 64 75.0
COL.COLO4_15259 Corchorus olitorius HOM05D004683 ORTHO05D005388 8.6e-16 87.4 65 73.8
Duzib235G0361 Durio zibethinus HOM05D004683 ORTHO05D005388 1.5e-15 86.7 64 71.9
MD10G1336700 Malus domestica HOM05D004683 ORTHO05D005388 1.5e-15 86.7 76 64.5
Sed0018998 Sechium edule HOM05D004683 ORTHO05D005388 1.9e-15 86.3 64 71.9
MD00G1058000 Malus domestica HOM05D004683 ORTHO05D005388 2.5e-15 85.9 65 69.2
ClCG01G010700 Citrullus lanatus HOM05D004683 ORTHO05D005388 3.3e-15 85.5 64 73.4
PGSC0003DMG400023555 Solanum tuberosum HOM05D004683 ORTHO05D005388 3.3e-15 85.5 62 74.2
Duzib160G0680 Durio zibethinus HOM05D004683 ORTHO05D005388 4.3e-15 85.1 75 66.7
Gorai.010G188900 Gossypium raimondii HOM05D004683 ORTHO05D005388 4.3e-15 85.1 62 75.8
GSVIVG01007216001 Vitis vinifera HOM05D004683 ORTHO05D005388 4.3e-15 85.1 63 73.0
Dinv04407 Davidia involucrata HOM05D004683 ORTHO05D005388 5.6e-15 84.7 64 70.3
Nitab4.5_0004646g0030 Nicotiana tabacum HOM05D004683 ORTHO05D005388 5.6e-15 84.7 73 71.2
PGSC0003DMG400013358 Solanum tuberosum HOM05D004683 ORTHO05D005388 5.6e-15 84.7 64 75.0
Gohir.A10G008300 Gossypium hirsutum HOM05D004683 ORTHO05D005388 7.3e-15 84.3 74 66.2
Solyc11g012610.2 Solanum lycopersicum HOM05D004683 ORTHO05D005388 7.3e-15 84.3 64 75.0
CAN.G696.10 Capsicum annuum HOM05D004683 ORTHO05D005388 9.5e-15 84.0 64 73.4
Cfa000066 Carpinus fangiana HOM05D004683 ORTHO05D005388 9.5e-15 84.0 71 69.0
Gohir.D10G008100 Gossypium hirsutum HOM05D004683 ORTHO05D005388 9.5e-15 84.0 74 66.2
Manes.09G081701 Manihot esculenta HOM05D004683 ORTHO05D005388 1.2e-14 83.6 76 69.7
CSS0018655 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 1.6e-14 83.2 68 69.1
CSS0042800 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 1.6e-14 83.2 68 69.1
Potri.006G017200 Populus trichocarpa HOM05D004683 ORTHO05D005388 1.6e-14 83.2 66 71.2
Gohir.D06G161900 Gossypium hirsutum HOM05D004683 ORTHO05D005388 2.1e-14 82.8 62 74.2
Oeu052851.1 Olea europaea HOM05D004683 ORTHO05D005388 2.1e-14 82.8 63 73.0
Aa31LG6G60 Aethionema arabicum HOM05D004683 ORTHO05D005388 2.8e-14 82.4 79 67.1
Sabra06G0012200 Salix brachista HOM05D004683 ORTHO05D005388 2.8e-14 82.4 65 72.3
Nn1g07478 Nelumbo nucifera HOM05D004683 ORTHO05D005388 3.6e-14 82.0 73 65.8
Medtr2g026550 Medicago truncatula HOM05D004683 ORTHO05D005388 4.7e-14 81.6 63 71.4
Phvul.006G141000 Phaseolus vulgaris HOM05D004683 ORTHO05D005388 4.7e-14 81.6 65 70.8
Gohir.A06G155500 Gossypium hirsutum HOM05D004683 ORTHO05D005388 8.0e-14 80.9 62 72.6
Lsat_1_v5_gn_7_14120 Lactuca sativa HOM05D004683 ORTHO05D005388 8.0e-14 80.9 74 66.2
DCAR_030854 Daucus carota HOM05D004683 ORTHO05D005388 1.1e-13 80.5 70 68.6
Sabra16G0012500 Salix brachista HOM05D004683 ORTHO05D005388 1.1e-13 80.5 74 67.6
CSS0016540 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 1.4e-13 80.1 74 66.2
CDE06G0298 Ceratophyllum demersum HOM05D000165 ORTHO05D005388 1.4e-13 80.1 64 65.6
Aqoxy4G02236 Aquilegia oxysepala HOM05D004683 ORTHO05D005388 1.8e-13 79.7 71 64.8
Gorai.011G008800 Gossypium raimondii HOM05D004683 ORTHO05D005388 1.8e-13 79.7 74 63.5
Potri.016G008400 Populus trichocarpa HOM05D004683 ORTHO05D005388 1.8e-13 79.7 74 66.2
Sc05g0009730 Simmondsia chinensis HOM05D004683 ORTHO05D005388 1.8e-13 79.7 71 66.2
TAR626G1909 Trochodendron aralioides HOM05D004683 ORTHO05D005388 1.8e-13 79.7 73 64.4
Atru.chr1.2335 Acer truncatum HOM05D004683 ORTHO05D005388 2.3e-13 79.3 73 67.1
CDE04G2289 Ceratophyllum demersum HOM05D004683 ORTHO05D005388 2.3e-13 79.3 72 61.1
arahy.Tifrunner.gnm1.ann1.5M71YA Arachis hypogaea HOM05D004683 ORTHO05D005388 4.0e-13 78.6 67 68.7
MBI19_g44082_MAGBIO Magnolia biondii HOM05D004683 ORTHO05D005388 4.0e-13 78.6 60 70.0
MELO3C025532.2 Cucumis melo HOM05D004683 ORTHO05D005388 6.8e-13 77.8 74 62.2
HanXRQChr15g0470281 Helianthus annuus HOM05D004683 ORTHO05D005388 8.9e-13 77.4 65 67.7
Lsat_1_v5_gn_0_24381 Lactuca sativa HOM05D004683 ORTHO05D005388 8.9e-13 77.4 61 70.5
arahy.Tifrunner.gnm1.ann1.L4TARN Arachis hypogaea HOM05D004683 ORTHO05D005388 1.2e-12 77.0 67 68.7
SGA_v2.0_scaffold7G03714 Striga asiatica HOM05D004683 ORTHO05D005388 1.5e-12 76.6 57 73.7
TAR341G0001 Trochodendron aralioides HOM05D004683 ORTHO05D005388 2.6e-12 75.9 73 63.0
TAR485G0001 Trochodendron aralioides HOM05D004683 ORTHO05D005388 2.6e-12 75.9 73 63.0
Actinidia11898 Actinidia chinensis HOM05D004683 ORTHO05D005388 4.4e-12 75.1 75 64.0
Actinidia39280 Actinidia chinensis HOM05D004683 ORTHO05D005388 5.8e-12 74.7 75 64.0
MSTRG.7144 Avicennia marina HOM05D004683 ORTHO05D005388 7.5e-12 74.3 56 71.4
Eucgr.D01443 Eucalyptus grandis HOM05D004683 ORTHO05D005388 7.5e-12 74.3 71 66.2
CANSAT56G4109 Cannabis sativa HOM05D004683 ORTHO05D005388 1.7e-11 73.2 61 70.5
CiPaw.09G105900 Carya illinoinensis HOM05D004683 ORTHO05D005388 1.7e-11 73.2 59 67.8
CDE04G1899 Ceratophyllum demersum HOM05D004683 ORTHO05D005388 1.7e-11 73.2 68 58.8
Os03g0750900 Oryza sativa ssp. japonica HOM05D004683 ORTHO05D005388 2.9e-11 72.4 72 62.5
PGR004G0928 Punica granatum HOM05D004683 ORTHO05D005388 4.9e-11 71.6 78 56.4
CAN.G1263.24 Capsicum annuum HOM05D004683 ORTHO05D005388 8.3e-11 70.9 60 65.0
PSO541G4951 Papaver somniferum HOM05D004683 ORTHO05D005388 1.9e-10 69.7 71 62.0
PSO675G6369 Papaver somniferum HOM05D004683 ORTHO05D005388 1.9e-10 69.7 71 62.0
HPP92_014031 Vanilla planifolia HOM05D004683 ORTHO05D005388 3.2e-10 68.9 65 60.0
CDE07G1645 Ceratophyllum demersum HOM05D004683 ORTHO05D005388 5.4e-10 68.2 68 55.9
vmacro15736 Vaccinium macrocarpon HOM05D004683 ORTHO05D005388 7.0e-10 67.8 56 66.1
Peaxi162Scf01544g00025 Petunia axillaris HOM05D004683 ORTHO05D005388 1.2e-09 67.0 71 62.0
QL05p068304 Quercus lobata HOM05D004683 ORTHO05D005388 1.2e-09 67.0 52 71.2
Thecc.06G237400 Theobroma cacao HOM05D004683 ORTHO05D005388 1.2e-09 67.0 57 70.2
Zm00001eb057420 Zea mays HOM05D004683 ORTHO05D005388 1.2e-09 67.0 80 55.0
Rhsim02G0091200 Rhododendron simsii HOM05D004683 ORTHO05D005388 1.6e-09 66.6 57 68.4
Sabra16G0012800 Salix brachista HOM05D004683 ORTHO05D005388 1.6e-09 66.6 80 58.8
Sopen00g010710 Solanum pennellii HOM05D004683 ORTHO05D005388 1.6e-09 66.6 67 59.7
Zm00001eb214850 Zea mays HOM05D004683 ORTHO05D005388 2.0e-09 66.2 80 55.0
ATR0624G003 Amborella trichopoda HOM05D004683 ORTHO05D005388 2.7e-09 65.9 70 55.7
Nitab4.5_0001109g0120 Nicotiana tabacum HOM05D004683 ORTHO05D005388 2.7e-09 65.9 66 65.2
TWI38G0781 Tripterygium wilfordii HOM05D004683 ORTHO05D005388 2.7e-09 65.9 56 66.1
QL05p068796 Quercus lobata HOM05D004683 ORTHO05D005388 3.5e-09 65.5 54 72.2
Hund21139 Selenicereus undatus HOM05D004683 ORTHO05D005388 4.6e-09 65.1 64 60.9
Oeu052866.1 Olea europaea HOM05D004683 ORTHO05D005388 6.0e-09 64.7 84 51.2
Sabra19G0093600 Salix brachista HOM05D000057 ORTHO05D005388 6.0e-09 64.7 64 59.4
AUR62021828 Chenopodium quinoa HOM05D004683 ORTHO05D005388 1.0e-08 63.9 63 63.5
Psat1g173720 Pisum sativum HOM05D004683 ORTHO05D005388 1.3e-08 63.5 61 63.9
TPR.G10575 Trifolium pratense HOM05D004683 ORTHO05D005388 1.7e-08 63.2 53 66.0
SalBow8G0627 Salvia bowleyana HOM05D004683 ORTHO05D005388 2.3e-08 62.8 104 46.2
unitig_37.g12183 Utricularia gibba HOM05D004683 ORTHO05D005388 2.3e-08 62.8 44 77.3
Cpa.g.sc27.252 Carica papaya HOM05D004683 ORTHO05D005388 3.0e-08 62.4 58 62.1
CSS0001859 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 3.9e-08 62.0 50 70.0
CSS0022133 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 3.9e-08 62.0 58 62.1
CSS0027604 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 3.9e-08 62.0 50 70.0
TWI63G0041 Tripterygium wilfordii HOM05D004683 ORTHO05D005388 1.1e-07 60.5 62 56.5
AUR62012829 Chenopodium quinoa HOM05D004683 ORTHO05D005388 1.9e-07 59.7 58 63.8
ECA246G4668 Erigeron canadensis HOM05D004683 ORTHO05D005388 1.9e-07 59.7 58 58.6
Migut.M01430 Erythranthe guttata HOM05D004683 ORTHO05D005388 3.3e-07 58.9 52 61.5
Ah.14g087460 Amaranthus hybridus HOM05D004683 ORTHO05D005388 7.3e-07 57.8 75 52.0
Sopen04g006980 Solanum pennellii HOM05D004683 ORTHO05D005388 9.5e-07 57.4 46 69.6
EL10Ac8g20240 Beta vulgaris HOM05D004683 ORTHO05D005388 1.2e-06 57.0 45 68.9
Hma1.2p1_0657F.1_g196900 Hydrangea macrophylla HOM05D004683 ORTHO05D005388 3.6e-06 55.5 61 59.0
Solyc04g014850.3 Solanum lycopersicum HOM05D004683 ORTHO05D005388 4.7e-06 55.1 46 67.4
HPP92_028363 Vanilla planifolia HOM05D004683 ORTHO05D005388 8.1e-06 54.3 95 42.1


User provided reference genes

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