Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p40150 Brassica napus HOM05D004542 ORTHO05D005380 1.0e-75 286.6 140 100.0
BraA09t39513Z Brassica rapa HOM05D004542 ORTHO05D005380 5.2e-75 284.3 140 99.3
C05p24230 Brassica napus HOM05D004542 ORTHO05D005380 2.5e-69 265.4 140 92.9
BolC5t31159H Brassica oleracea HOM05D004542 ORTHO05D005380 7.3e-69 263.8 140 92.1
BcaC05g26392 Brassica carinata HOM05D004542 ORTHO05D005380 4.7e-68 261.2 140 91.4
C07p19550 Brassica napus HOM05D004542 ORTHO05D005380 3.9e-62 241.5 140 82.1
BolC7t42472H Brassica oleracea HOM05D004542 ORTHO05D005380 3.9e-62 241.5 140 82.1
BcaC06g35127 Brassica carinata HOM05D004542 ORTHO05D005380 5.0e-62 241.1 140 82.9
Thhalv10009076m.g Eutrema salsugineum HOM05D004542 ORTHO05D005380 1.5e-61 239.6 140 84.3
BraA07t29078Z Brassica rapa HOM05D004542 ORTHO05D005380 1.9e-61 239.2 142 82.4
Carub.0001s2428 Capsella rubella HOM05D004542 ORTHO05D005380 1.2e-60 236.5 139 82.0
A07p13070 Brassica napus HOM05D004542 ORTHO05D005380 2.1e-60 235.7 142 81.0
BcaB03g14086 Brassica carinata HOM05D004542 ORTHO05D005380 6.8e-59 230.7 140 80.0
AT1G26740 Arabidopsis thaliana HOM05D004542 ORTHO05D005380 3.4e-58 228.4 136 80.1
AL1G38970 Arabidopsis lyrata HOM05D004542 ORTHO05D005380 1.3e-57 226.5 136 80.9
CARHR025220 Cardamine hirsuta HOM05D004542 ORTHO05D005380 9.2e-56 220.3 136 80.1
Aa31LG7G8390 Aethionema arabicum HOM05D004542 ORTHO05D005380 7.8e-55 217.2 140 76.4
Sp1g22070 Schrenkiella parvula HOM05D004542 ORTHO05D005380 3.8e-49 198.4 114 86.0
Sp5g24560 Schrenkiella parvula HOM05D004542 ORTHO05D005380 1.2e-47 193.4 137 69.3
AL2G28600 Arabidopsis lyrata HOM05D004542 ORTHO05D005380 2.8e-44 182.2 139 65.5
THA.LOC104808670 Tarenaya hassleriana HOM05D004542 ORTHO05D005380 6.2e-44 181.0 139 64.0
THA.LOC104822040 Tarenaya hassleriana HOM05D004542 ORTHO05D005380 7.6e-42 174.1 132 66.7
Atru.chr11.1738 Acer truncatum HOM05D004542 ORTHO05D005380 5.4e-40 167.9 136 62.5
TWI09G1372 Tripterygium wilfordii HOM05D004542 ORTHO05D005380 2.7e-39 165.6 140 57.9
Cpa.g.sc69.70 Carica papaya HOM05D004542 ORTHO05D005380 3.5e-39 165.2 140 57.1
Duzib248G0510 Durio zibethinus HOM05D004542 ORTHO05D005380 1.0e-38 163.7 138 58.7
Ciclev10033055m.g Citrus clementina HOM05D004542 ORTHO05D005380 3.0e-38 162.2 133 59.4
Manes.01G033600 Manihot esculenta HOM05D004542 ORTHO05D005380 5.1e-38 161.4 137 58.4
Prupe.1G009500 Prunus persica HOM05D004542 ORTHO05D005380 6.6e-38 161.0 137 56.9
Thecc.02G341300 Theobroma cacao HOM05D004542 ORTHO05D005380 1.5e-37 159.8 138 56.5
Duzib251G0803 Durio zibethinus HOM05D004542 ORTHO05D005380 1.9e-37 159.5 140 58.6
TWI73G0467 Tripterygium wilfordii HOM05D004542 ORTHO05D005380 7.3e-37 157.5 140 56.4
Cfa004898 Carpinus fangiana HOM05D004542 ORTHO05D005380 1.8e-35 152.9 137 56.9
FvH4_4g13880 Fragaria vesca HOM05D004542 ORTHO05D005380 2.6e-34 149.1 137 52.6
FAN12G3669 Fragaria x ananassa HOM05D004542 ORTHO05D005380 2.6e-34 149.1 137 52.6
MD04G1010200 Malus domestica HOM05D004542 ORTHO05D005380 2.6e-34 149.1 133 54.9
Potri.010G165100 Populus trichocarpa HOM05D004542 ORTHO05D005380 3.4e-34 148.7 133 57.1
Potri.008G090100 Populus trichocarpa HOM05D004542 ORTHO05D005380 4.5e-34 148.3 142 54.9
Actinidia31969 Actinidia chinensis HOM05D004542 ORTHO05D005380 5.8e-34 147.9 139 56.1
Cpa.g.sc57.38 Carica papaya HOM05D004542 ORTHO05D005380 9.9e-34 147.1 118 56.8
CiPaw.06G087700 Carya illinoinensis HOM05D004542 ORTHO05D005380 2.9e-33 145.6 116 57.8
RcHm_v2.0_Chr4g0415001 Rosa chinensis HOM05D004542 ORTHO05D005380 4.9e-33 144.8 138 51.4
FAN07G0300 Fragaria x ananassa HOM05D004542 ORTHO05D005380 6.4e-33 144.4 137 51.1
FAN22G1961 Fragaria x ananassa HOM05D004542 ORTHO05D005380 6.4e-33 144.4 137 51.8
CANSAT21G2357 Cannabis sativa HOM05D004542 ORTHO05D005380 1.1e-32 143.7 133 53.4
Dinv07945 Davidia involucrata HOM05D004542 ORTHO05D005380 1.4e-32 143.3 136 54.4
QL05p050003 Quercus lobata HOM05D004542 ORTHO05D005380 2.4e-32 142.5 116 59.5
RcHm_v2.0_Chr6g0251041 Rosa chinensis HOM05D004542 ORTHO05D005380 3.2e-32 142.1 137 55.5
ClCG05G024060 Citrullus lanatus HOM05D004542 ORTHO05D005380 4.2e-32 141.7 139 49.6
CSS0014017 Camellia sinensis var. sinensis HOM05D004542 ORTHO05D005380 5.4e-32 141.4 138 52.2
CSS0031140 Camellia sinensis var. sinensis HOM05D004542 ORTHO05D005380 5.4e-32 141.4 138 52.2
MSTRG.2336 Avicennia marina HOM05D004542 ORTHO05D005380 7.1e-32 141.0 143 51.7
Peaxi162Scf00222g00329 Petunia axillaris HOM05D004542 ORTHO05D005380 9.3e-32 140.6 137 52.6
Solyc04g005590.3 Solanum lycopersicum HOM05D004542 ORTHO05D005380 1.6e-31 139.8 141 51.8
Sopen04g001630 Solanum pennellii HOM05D004542 ORTHO05D005380 2.1e-31 139.4 120 56.7
Actinidia17747 Actinidia chinensis HOM05D004542 ORTHO05D005380 2.7e-31 139.0 139 53.2
Peaxi162Scf00023g02531 Petunia axillaris HOM05D004542 ORTHO05D005380 7.9e-31 137.5 122 56.6
Gohir.A07G047800 Gossypium hirsutum HOM05D004542 ORTHO05D005380 2.3e-30 136.0 140 54.3
Cc00_g16630 Coffea canephora HOM05D004542 ORTHO05D005380 3.0e-30 135.6 140 52.9
Sabra08G0067500 Salix brachista HOM05D004542 ORTHO05D005380 3.9e-30 135.2 151 50.3
PGSC0003DMG400002854 Solanum tuberosum HOM05D004542 ORTHO05D005380 3.9e-30 135.2 141 51.8
Gohir.D07G052100 Gossypium hirsutum HOM05D004542 ORTHO05D005380 1.1e-29 133.7 140 52.9
Nitab4.5_0000391g0330 Nicotiana tabacum HOM05D004542 ORTHO05D005380 1.5e-29 133.3 132 51.5
TAR622G0172 Trochodendron aralioides HOM05D004542 ORTHO05D005380 1.9e-29 132.9 118 53.4
ECA233G6069 Erigeron canadensis HOM05D004542 ORTHO05D005380 2.5e-29 132.5 138 52.9
Hma1.2p1_0357F.1_g134240 Hydrangea macrophylla HOM05D004542 ORTHO05D005380 3.3e-29 132.1 97 64.9
Gorai.001G055100 Gossypium raimondii HOM05D004542 ORTHO05D005380 5.6e-29 131.3 142 51.4
Sed0021036 Sechium edule HOM05D004542 ORTHO05D005380 5.6e-29 131.3 130 51.5
Nitab4.5_0013306g0010 Nicotiana tabacum HOM05D004542 ORTHO05D005380 7.4e-29 131.0 133 50.4
Sc14g0007580 Simmondsia chinensis HOM05D004542 ORTHO05D005380 7.4e-29 131.0 112 59.8
CsaV3_5G032980 Cucumis sativus L. HOM05D004542 ORTHO05D005380 9.6e-29 130.6 98 60.2
PGR083G2602 Punica granatum HOM05D004542 ORTHO05D005380 1.3e-28 130.2 140 50.0
RcHm_v2.0_Chr4g0414951 Rosa chinensis HOM05D004542 ORTHO05D005380 1.6e-28 129.8 139 47.5
Lsat_1_v5_gn_8_48901 Lactuca sativa HOM05D004542 ORTHO05D005380 2.1e-28 129.4 132 53.8
PSO063G3361 Papaver somniferum HOM05D004542 ORTHO05D005380 2.1e-28 129.4 139 52.5
MELO3C012119.2 Cucumis melo HOM05D004542 ORTHO05D005380 4.8e-28 128.3 108 57.4
Eucgr.D00185 Eucalyptus grandis HOM05D004542 ORTHO05D005380 8.1e-28 127.5 103 56.3
Migut.L01259 Erythranthe guttata HOM05D004542 ORTHO05D005380 1.8e-27 126.3 140 49.3
Oeu001710.1 Olea europaea HOM05D004542 ORTHO05D005380 1.8e-27 126.3 138 48.6
HanXRQChr12g0361941 Helianthus annuus HOM05D004542 ORTHO05D005380 2.4e-27 125.9 136 49.3
EL10Ac2g02750 Beta vulgaris HOM05D004542 ORTHO05D005380 6.9e-27 124.4 139 50.4
AUR62031723 Chenopodium quinoa HOM05D004542 ORTHO05D005380 1.5e-26 123.2 139 49.6
Aqoxy3G03464 Aquilegia oxysepala HOM05D004542 ORTHO05D005380 3.4e-26 122.1 131 50.4
DCAR_027429 Daucus carota HOM05D004542 ORTHO05D005380 7.6e-26 120.9 186 41.4
Sc03g0001820 Simmondsia chinensis HOM05D004542 ORTHO05D005380 7.6e-26 120.9 132 50.0
HanXRQChr15g0476941 Helianthus annuus HOM05D004542 ORTHO05D005380 9.9e-26 120.6 108 57.4
MBI02_g20485_MAGBIO Magnolia biondii HOM05D004542 ORTHO05D005380 2.2e-25 119.4 128 48.4
Nn3g18387 Nelumbo nucifera HOM05D004542 ORTHO05D005380 2.2e-25 119.4 90 61.1
Sopen05g007930 Solanum pennellii HOM05D004542 ORTHO05D005380 2.2e-25 119.4 118 53.4
Nn3g17306 Nelumbo nucifera HOM05D004542 ORTHO05D005380 6.4e-25 117.9 103 55.3
SalBow1G8597 Salvia bowleyana HOM05D004542 ORTHO05D005380 8.4e-25 117.5 114 51.8
Solyc05g013190.4 Solanum lycopersicum HOM05D004542 ORTHO05D005380 2.4e-24 115.9 139 48.9
ECA246G0207 Erigeron canadensis HOM05D004542 ORTHO05D005380 5.5e-24 114.8 113 54.9
AT1G69485 Arabidopsis thaliana HOM05D004542 ORTHO05D005380 7.1e-24 114.4 60 81.7
COL.COLO4_32021 Corchorus olitorius HOM05D004542 ORTHO05D005380 7.1e-24 114.4 119 52.1
Os03g0168900 Oryza sativa ssp. japonica HOM05D004542 ORTHO05D005380 9.3e-24 114.0 62 75.8
arahy.Tifrunner.gnm1.ann1.53F0XR Arachis hypogaea HOM05D004542 ORTHO05D005380 1.2e-23 113.6 135 45.2
arahy.Tifrunner.gnm1.ann1.H527P9 Arachis hypogaea HOM05D004542 ORTHO05D005380 1.2e-23 113.6 135 45.2
Lalb_Chr10g0097781 Lupinus albus HOM05D004542 ORTHO05D005380 1.2e-23 113.6 71 69.0
Psat0s1693g0080 Pisum sativum HOM05D004542 ORTHO05D005380 1.2e-23 113.6 134 45.5
Haze_11968 Corylus avellana HOM05D004542 ORTHO05D005380 2.1e-23 112.8 110 54.5
CDE04G0708 Ceratophyllum demersum HOM05D004542 ORTHO05D005380 4.6e-23 111.7 67 74.6
Glyma.05G118100 Glycine max HOM05D004542 ORTHO05D005380 6.0e-23 111.3 130 44.6
Phvul.002G208200 Phaseolus vulgaris HOM05D004542 ORTHO05D005380 6.0e-23 111.3 62 75.8
CDE07G0585 Ceratophyllum demersum HOM05D004542 ORTHO05D005380 7.9e-23 110.9 67 74.6
SalBow1G4390 Salvia bowleyana HOM05D004542 ORTHO05D005380 7.9e-23 110.9 78 64.1
Zm00001eb402400 Zea mays HOM05D004542 ORTHO05D005380 1.0e-22 110.5 58 81.0
TPR.G5742 Trifolium pratense HOM05D004542 ORTHO05D005380 1.3e-22 110.2 97 54.6
SGA_v2.0_scaffold455G51899 Striga asiatica HOM05D004542 ORTHO05D005380 1.8e-22 109.8 122 50.0
VMungo0251G2924 Vigna mungo HOM05D004542 ORTHO05D005380 1.8e-22 109.8 98 55.1
Os10g0407100 Oryza sativa ssp. japonica HOM05D004542 ORTHO05D005380 2.3e-22 109.4 59 74.6
Ah.08g212630 Amaranthus hybridus HOM05D004542 ORTHO05D005380 3.0e-22 109.0 98 55.1
Medtr1g025320 Medicago truncatula HOM05D004542 ORTHO05D005380 3.9e-22 108.6 118 49.2
SalBow1G7833 Salvia bowleyana HOM05D004542 ORTHO05D005380 3.9e-22 108.6 114 50.0
Nitab4.5_0001077g0020 Nicotiana tabacum HOM05D004542 ORTHO05D005380 1.1e-21 107.1 158 43.7
Manes.05G105400 Manihot esculenta HOM05D004542 ORTHO05D005380 1.9e-21 106.3 112 50.9
Glyma.08G073000 Glycine max HOM05D004542 ORTHO05D005380 3.3e-21 105.5 130 43.1
CANSAT21G0056 Cannabis sativa HOM05D004542 ORTHO05D005380 4.3e-21 105.1 114 49.1
Glyma.06G320500 Glycine max HOM05D004542 ORTHO05D005380 4.3e-21 105.1 64 71.9
SalBow1G1756 Salvia bowleyana HOM05D004542 ORTHO05D005380 4.3e-21 105.1 61 72.1
AUR62032610 Chenopodium quinoa HOM05D004542 ORTHO05D005380 5.6e-21 104.8 173 39.3
Ca_18347_v3 Cicer arietinum L. HOM05D004542 ORTHO05D005380 7.4e-21 104.4 62 66.1
TPR.G8852 Trifolium pratense HOM05D004542 ORTHO05D005380 7.4e-21 104.4 130 43.8
Lj4g0012875 Lotus japonicus HOM05D004542 ORTHO05D005380 1.3e-20 103.6 62 67.7
Rhsim05G0092000 Rhododendron simsii HOM05D004542 ORTHO05D005380 8.1e-20 100.9 117 50.4
RhsimUnG0183400 Rhododendron simsii HOM05D004542 ORTHO05D005380 8.1e-20 100.9 117 50.4
MD13G1284400 Malus domestica HOM05D002269 ORTHO05D005380 3.1e-19 99.0 72 63.9
Lj4g0007672 Lotus japonicus HOM05D004542 ORTHO05D005380 1.5e-18 96.7 58 67.2
Sopen03g017060 Solanum pennellii HOM05D004542 ORTHO05D005380 2.0e-18 96.3 61 67.2
Carub.0002s1610 Capsella rubella HOM05D004542 ORTHO05D005380 2.6e-18 95.9 52 78.8
Ciclev10013639m.g Citrus clementina HOM05D004542 ORTHO05D005380 1.3e-17 93.6 133 40.6
Hund04421 Selenicereus undatus HOM05D004542 ORTHO05D005380 2.2e-17 92.8 115 47.8
Oeu054854.1 Olea europaea HOM05D004542 ORTHO05D005380 3.5e-15 85.5 116 45.7
Mapoly0152s0024 Marchantia polymorpha HOM05D004542 ORTHO05D005380 5.1e-14 81.6 51 64.7
PSO782G1969 Papaver somniferum HOM05D004542 ORTHO05D005380 5.1e-14 81.6 116 45.7
AagrBONN_evm.TU.Sc2ySwM_228.5417 Anthoceros agrestis HOM05D004542 ORTHO05D005380 1.9e-13 79.7 61 59.0
CBR_g23146 Chara braunii HOM05D004542 ORTHO05D005380 3.3e-13 79.0 50 60.0
Pp3c1_32410 Physcomitrium patens HOM05D004542 ORTHO05D005380 7.4e-13 77.8 53 56.6
Nitab4.5_0000014g0150 Nicotiana tabacum HOM05D004542 ORTHO05D005380 2.1e-12 76.3 134 38.8
SMO358G0607 Selaginella moellendorffii HOM05D000228 ORTHO05D005112 3.7e-12 75.5 49 63.3
Glyma.04G115800 Glycine max HOM05D004542 ORTHO05D005380 2.4e-11 72.8 61 62.3
COL.COLO4_27991 Corchorus olitorius HOM05D004542 ORTHO05D005380 1.5e-10 70.1 108 43.5
Sabra10G0125700 Salix brachista HOM05D004542 ORTHO05D005380 7.6e-10 67.8 98 43.9
Zm00001eb005320 Zea mays HOM05D004542 ORTHO05D005380 7.6e-10 67.8 38 73.7
MBI02_g44667_MAGBIO Magnolia biondii HOM05D004542 ORTHO05D005380 1.3e-09 67.0 106 38.7
COL.COLO4_27990 Corchorus olitorius HOM05D004542 ORTHO05D005380 1.8e-06 56.6 84 42.9
SEGI_34151 Sequoiadendron giganteum HOM05D004542 ORTHO05D005380 5.1e-06 55.1 104 38.5
unitig_8.g3954 Utricularia gibba HOM05D006796 ORTHO05D008615 5.1e-06 55.1 37 64.9
CBR_g39054 Chara braunii HOM05D004542 ORTHO05D005380 8.7e-06 54.3 60 38.3
MCO02G272 Micromonas commoda HOM05D004542 ORTHO05D005380 8.7e-06 54.3 66 37.9


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