Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p40050 Brassica napus HOM05D007053 ORTHO05D008922 9.1e-187 656.8 331 100.0
BraA09t39501Z Brassica rapa HOM05D007053 ORTHO05D008922 4.7e-183 644.4 331 98.5
BcaC05g26403 Brassica carinata HOM05D007053 ORTHO05D008922 2.4e-179 632.1 331 96.1
C05p24370 Brassica napus HOM05D007053 ORTHO05D008922 4.1e-179 631.3 331 96.1
BolC5t31171H Brassica oleracea HOM05D007053 ORTHO05D008922 3.5e-178 628.2 331 95.5
Thhalv10008165m.g Eutrema salsugineum HOM05D007053 ORTHO05D008922 2.7e-170 602.1 331 91.8
Sp1g22160 Schrenkiella parvula HOM05D007053 ORTHO05D008922 2.9e-169 598.6 331 90.3
AL1G39090 Arabidopsis lyrata HOM05D007053 ORTHO05D008922 1.1e-168 596.7 331 90.9
AT1G26640 Arabidopsis thaliana HOM05D007053 ORTHO05D008922 4.7e-167 591.3 333 89.8
Carub.0001s2439 Capsella rubella HOM05D007053 ORTHO05D008922 3.7e-164 581.6 331 88.8
CARHR025330 Cardamine hirsuta HOM05D007053 ORTHO05D008922 8.3e-164 580.5 332 88.6
Aa31LG7G8460 Aethionema arabicum HOM05D007053 ORTHO05D008922 1.2e-157 560.1 331 87.0
THA.LOC104808621 Tarenaya hassleriana HOM05D007053 ORTHO05D008922 1.1e-152 543.5 332 81.6
Manes.01G031400 Manihot esculenta HOM05D007053 ORTHO05D008922 3.3e-136 488.8 326 75.8
Potri.010G162900 Populus trichocarpa HOM05D007053 ORTHO05D008922 1.6e-135 486.5 321 75.7
Thecc.02G338500 Theobroma cacao HOM05D007053 ORTHO05D008922 4.7e-135 485.0 322 74.2
Atru.chr11.1705 Acer truncatum HOM05D007053 ORTHO05D008922 2.4e-134 482.6 318 74.8
Duzib248G0053 Durio zibethinus HOM05D007053 ORTHO05D008922 6.8e-134 481.1 323 74.0
Gohir.A13G079000 Gossypium hirsutum HOM05D007053 ORTHO05D008922 9.9e-133 477.2 323 74.3
RcHm_v2.0_Chr4g0439031 Rosa chinensis HOM05D007053 ORTHO05D008922 1.7e-132 476.5 320 74.7
Sabra10G0123900 Salix brachista HOM05D007053 ORTHO05D008922 1.7e-132 476.5 328 72.6
Gorai.013G090300 Gossypium raimondii HOM05D007053 ORTHO05D008922 1.9e-131 473.0 323 73.7
FAN07G1757 Fragaria x ananassa HOM05D007053 ORTHO05D008922 1.6e-130 469.9 320 73.1
FAN22G1358 Fragaria x ananassa HOM05D007053 ORTHO05D008922 1.6e-130 469.9 320 73.1
Lj2g0014226 Lotus japonicus HOM05D007053 ORTHO05D008922 1.6e-130 469.9 331 71.9
QL03p069977 Quercus lobata HOM05D007053 ORTHO05D008922 1.6e-130 469.9 324 72.2
Cfa008919 Carpinus fangiana HOM05D007053 ORTHO05D008922 2.1e-130 469.5 320 73.4
FAN22G2353 Fragaria x ananassa HOM05D007053 ORTHO05D008922 3.5e-130 468.8 320 73.1
FAN17G2706 Fragaria x ananassa HOM05D007053 ORTHO05D008922 1.0e-129 467.2 320 72.8
Actinidia33234 Actinidia chinensis HOM05D007053 ORTHO05D008922 1.3e-129 466.8 323 71.2
Sc04g0007810 Simmondsia chinensis HOM05D007053 ORTHO05D008922 1.7e-129 466.5 326 72.4
Dinv16695 Davidia involucrata HOM05D007053 ORTHO05D008922 6.6e-129 464.5 321 73.2
Medtr5g042980 Medicago truncatula HOM05D007053 ORTHO05D008922 6.6e-129 464.5 322 73.3
PGR102G0611 Punica granatum HOM05D007053 ORTHO05D008922 8.7e-129 464.2 323 71.8
CiPaw.06G089300 Carya illinoinensis HOM05D007053 ORTHO05D008922 1.9e-128 463.0 320 73.4
CSS0045311 Camellia sinensis var. sinensis HOM05D007053 ORTHO05D008922 2.5e-128 462.6 323 71.2
Glyma.02G112200 Glycine max HOM05D007053 ORTHO05D008922 2.5e-128 462.6 327 72.2
ClCG09G022040 Citrullus lanatus HOM05D007053 ORTHO05D008922 7.3e-128 461.1 329 69.0
FvH4_4g30620 Fragaria vesca HOM05D007053 ORTHO05D008922 7.3e-128 461.1 320 72.2
TPR.G19934 Trifolium pratense HOM05D007053 ORTHO05D008922 7.3e-128 461.1 322 72.7
CANSAT64G1913 Cannabis sativa HOM05D007053 ORTHO05D008922 9.6e-128 460.7 319 72.4
TAR629G2828 Trochodendron aralioides HOM05D007053 ORTHO05D008922 9.6e-128 460.7 324 71.0
GSVIVG01001339001 Vitis vinifera HOM05D007053 ORTHO05D008922 1.3e-127 460.3 324 72.2
CSS0030124 Camellia sinensis var. sinensis HOM05D007053 ORTHO05D008922 1.6e-127 459.9 323 70.9
MD13G1067400 Malus domestica HOM05D007053 ORTHO05D008922 2.8e-127 459.1 325 70.8
Phvul.002G091000 Phaseolus vulgaris HOM05D007053 ORTHO05D008922 2.8e-127 459.1 327 71.9
Eucgr.B03188 Eucalyptus grandis HOM05D007053 ORTHO05D008922 6.2e-127 458.0 331 70.7
Lalb_Chr10g0098501 Lupinus albus HOM05D007053 ORTHO05D008922 6.2e-127 458.0 322 72.0
MELO3C002980.2 Cucumis melo HOM05D007053 ORTHO05D008922 8.1e-127 457.6 320 70.9
Sed0004632 Sechium edule HOM05D007053 ORTHO05D008922 8.1e-127 457.6 319 70.2
Psat2g127520 Pisum sativum HOM05D007053 ORTHO05D008922 5.3e-126 454.9 322 71.4
HanXRQChr08g0211061 Helianthus annuus HOM05D007053 ORTHO05D008922 2.0e-125 453.0 317 70.3
Aqoxy3G03518 Aquilegia oxysepala HOM05D007053 ORTHO05D008922 2.6e-125 452.6 322 69.9
Ca_04893_v3 Cicer arietinum L. HOM05D007053 ORTHO05D008922 2.6e-125 452.6 322 71.4
Ciclev10031995m.g Citrus clementina HOM05D007053 ORTHO05D008922 4.4e-125 451.8 329 68.7
VMungo1215G2121 Vigna mungo HOM05D007053 ORTHO05D008922 9.9e-125 450.7 323 71.2
Lsat_1_v5_gn_8_46861 Lactuca sativa HOM05D007053 ORTHO05D008922 1.3e-124 450.3 316 69.9
AUR62005859 Chenopodium quinoa HOM05D007053 ORTHO05D008922 4.9e-124 448.4 344 66.9
Migut.L01233 Erythranthe guttata HOM05D007053 ORTHO05D008922 1.1e-123 447.2 321 69.5
Nn4g23303 Nelumbo nucifera HOM05D007053 ORTHO05D008922 1.9e-123 446.4 317 70.7
PSO063G7037 Papaver somniferum HOM05D007053 ORTHO05D008922 1.9e-123 446.4 328 69.5
Hund06137 Selenicereus undatus HOM05D007053 ORTHO05D008922 2.4e-123 446.0 312 70.8
Rhsim12G0133300 Rhododendron simsii HOM05D007053 ORTHO05D008922 1.6e-122 443.4 330 69.1
MSTRG.7772 Avicennia marina HOM05D007053 ORTHO05D008922 7.9e-122 441.0 322 68.6
PSO063G1507 Papaver somniferum HOM05D007053 ORTHO05D008922 1.0e-121 440.7 329 69.0
Solyc04g005520.3 Solanum lycopersicum HOM05D007053 ORTHO05D008922 5.1e-121 438.3 319 68.3
Sopen04g001540 Solanum pennellii HOM05D007053 ORTHO05D008922 8.7e-121 437.6 319 68.3
ECA233G1809 Erigeron canadensis HOM05D007053 ORTHO05D008922 1.1e-120 437.2 318 68.6
Lj3A1033T59 Lonicera japonica HOM05D007053 ORTHO05D008922 1.6e-119 433.3 333 67.3
Cc11_g12440 Coffea canephora HOM05D007053 ORTHO05D008922 5.3e-118 428.3 318 67.9
CAN.G765.42 Capsicum annuum HOM05D007053 ORTHO05D008922 1.5e-117 426.8 309 68.3
Haze_11947 Corylus avellana HOM05D007053 ORTHO05D008922 2.6e-117 426.0 319 69.0
PGSC0003DMG400002850 Solanum tuberosum HOM05D007053 ORTHO05D008922 4.9e-116 421.8 330 65.2
arahy.Tifrunner.gnm1.ann1.8N8AS7 Arachis hypogaea HOM05D007053 ORTHO05D008922 6.4e-116 421.4 328 67.7
COL.COLO4_27954 Corchorus olitorius HOM05D007053 ORTHO05D008922 6.4e-116 421.4 322 67.7
FAN12G2464 Fragaria x ananassa HOM05D007053 ORTHO05D008922 4.2e-115 418.7 281 73.7
EL10Ac6g13278 Beta vulgaris HOM05D007053 ORTHO05D008922 2.1e-114 416.4 323 66.6
CsaV3_5G025100 Cucumis sativus L. HOM05D007053 ORTHO05D008922 6.0e-114 414.8 281 72.2
AUR62032851 Chenopodium quinoa HOM05D007053 ORTHO05D008922 4.8e-111 405.2 321 65.4
Peaxi162Scf00187g00127 Petunia axillaris HOM05D007053 ORTHO05D008922 1.1e-107 394.0 327 62.1
Zm00001eb370300 Zea mays HOM05D007053 ORTHO05D008922 1.4e-107 393.7 327 64.5
ATR0730G101 Amborella trichopoda HOM05D007053 ORTHO05D008922 2.5e-107 392.9 325 63.1
Nitab4.5_0011225g0030 Nicotiana tabacum HOM05D007053 ORTHO05D008922 9.3e-107 391.0 309 66.3
TWI79G1311 Tripterygium wilfordii HOM05D007053 ORTHO05D008922 2.9e-100 369.4 323 59.8
vmacro16354 Vaccinium macrocarpon HOM05D007053 ORTHO05D008922 6.5e-100 368.2 431 48.7
Ah.02g129320 Amaranthus hybridus HOM05D007053 ORTHO05D008922 2.5e-99 366.3 353 57.5
Nitab4.5_0000014g0210 Nicotiana tabacum HOM05D007053 ORTHO05D008922 6.1e-98 361.7 270 68.1
Prupe.1G280800 Prunus persica HOM05D007053 ORTHO05D008922 6.1e-98 361.7 322 59.3
Oeu021091.2 Olea europaea HOM05D007053 ORTHO05D008922 2.3e-97 359.8 372 55.1
unitig_699.g19912 Utricularia gibba HOM05D007053 ORTHO05D008922 2.3e-97 359.8 319 60.5
Pp3c3_35320 Physcomitrium patens HOM05D007053 ORTHO05D008922 5.9e-93 345.1 320 56.2
SGA_v2.0_scaffold16G07742 Striga asiatica HOM05D007053 ORTHO05D008922 2.5e-91 339.7 355 53.0
SMO116G0352 Selaginella moellendorffii HOM05D007053 ORTHO05D008922 9.7e-88 327.8 325 55.7
Mapoly0180s0007 Marchantia polymorpha HOM05D007053 ORTHO05D008922 7.4e-80 301.6 317 52.4
MBI19_g40191_MAGBIO Magnolia biondii HOM05D007053 ORTHO05D008922 7.7e-77 291.6 207 70.0
DCAR_030987 Daucus carota HOM05D007053 ORTHO05D008922 6.5e-76 288.5 224 67.0
AagrBONN_evm.TU.Sc2ySwM_228.2378 Anthoceros agrestis HOM05D007053 ORTHO05D008922 1.7e-68 263.8 297 52.2
QL03p070004 Quercus lobata HOM05D007053 ORTHO05D008922 5.4e-62 242.3 277 50.9
CBR_g29893 Chara braunii HOM05D007053 ORTHO05D008922 1.2e-56 224.6 353 41.1
Cre13.g579800 Chlamydomonas reinhardtii HOM05D007053 ORTHO05D008922 2.3e-52 210.3 303 41.3
arahy.Tifrunner.gnm1.ann1.L47GGJ Arachis hypogaea HOM05D007053 ORTHO05D008922 3.2e-46 189.9 167 59.9
Pp3c8_2060 Physcomitrium patens HOM05D007053 ORTHO05D008922 4.1e-46 189.5 185 55.7
CDE02G3282 Ceratophyllum demersum HOM05D007053 ORTHO05D008922 4.7e-42 176.0 184 54.3
FAN17G3123 Fragaria x ananassa HOM05D007053 ORTHO05D008922 1.7e-39 167.5 104 77.9
SEGI_12600 Sequoiadendron giganteum HOM05D007053 ORTHO05D008922 1.4e-38 164.5 119 63.9
CDE02G3739 Ceratophyllum demersum HOM05D007053 ORTHO05D008922 7.3e-35 152.1 108 66.7
MCO04G110 Micromonas commoda HOM05D007053 ORTHO05D008922 3.3e-19 100.1 230 32.6
AL2G14220 Arabidopsis lyrata HOM05D011085 ORTHO05D031413 2.4e-14 84.0 81 58.0
Os01g0764600 Oryza sativa ssp. japonica HOM05D007053 ORTHO05D008922 4.3e-11 73.2 83 51.8
Lsat_1_v5_gn_1_96520 Lactuca sativa HOM05D007053 ORTHO05D008922 2.8e-10 70.5 52 61.5
Lsat_1_v5_gn_5_96721 Lactuca sativa HOM05D007053 ORTHO05D008922 1.4e-06 58.2 51 52.9
SEGI_13989 Sequoiadendron giganteum HOM05D007053 ORTHO05D008922 2.4e-06 57.4 78 47.4


User provided reference genes

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