Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p38070 Brassica napus HOM05D008434 ORTHO05D011150 3.9e-72 274.6 132 100.0
BraA09t39317Z Brassica rapa HOM05D008434 ORTHO05D011150 3.9e-72 274.6 132 100.0
A09p38090 Brassica napus HOM05D008434 ORTHO05D011150 2.5e-71 271.9 132 99.2
BraA09t39319Z Brassica rapa HOM05D008434 ORTHO05D011150 2.5e-71 271.9 132 99.2
BraA09t39320Z Brassica rapa HOM05D008434 ORTHO05D011150 2.5e-71 271.9 132 99.2
BraA09t39321Z Brassica rapa HOM05D008434 ORTHO05D011150 2.5e-71 271.9 132 99.2
A09p38060 Brassica napus HOM05D008434 ORTHO05D011150 1.2e-70 269.6 132 97.7
BraA09t39316Z Brassica rapa HOM05D008434 ORTHO05D011150 1.2e-70 269.6 132 97.7
BolC3t15919H Brassica oleracea HOM05D008434 ORTHO05D011150 2.1e-70 268.9 132 97.0
A09p38080 Brassica napus HOM05D008434 ORTHO05D011150 4.7e-70 267.7 132 97.7
BraA09t39318Z Brassica rapa HOM05D008434 ORTHO05D011150 6.2e-70 267.3 132 97.0
BraA03t12174Z Brassica rapa HOM05D008434 ORTHO05D011150 1.1e-69 266.5 132 96.2
C03p36100 Brassica napus HOM05D008434 ORTHO05D011150 1.4e-69 266.2 132 95.5
A03p29840 Brassica napus HOM05D008434 ORTHO05D011150 2.4e-69 265.4 132 95.5
BcaC01g04576 Brassica carinata HOM05D008434 ORTHO05D011150 2.0e-68 262.3 129 96.9
A05p35910 Brassica napus HOM05D008434 ORTHO05D011150 3.8e-67 258.1 132 93.2
BraA05t22397Z Brassica rapa HOM05D008434 ORTHO05D011150 3.8e-67 258.1 132 93.2
Sp6g04890 Schrenkiella parvula HOM05D008434 ORTHO05D011150 3.6e-33 145.2 123 55.3
BraA09t39322Z Brassica rapa HOM05D008434 ORTHO05D011150 2.5e-31 139.0 69 100.0
Thhalv10029127m.g Eutrema salsugineum HOM05D008434 ORTHO05D011150 4.3e-31 138.3 129 51.2
Thhalv10029394m.g Eutrema salsugineum HOM05D008434 ORTHO05D011150 4.3e-31 138.3 132 48.5
BcaC03g14230 Brassica carinata HOM05D008434 ORTHO05D011150 5.3e-29 131.3 127 50.4
A02p09170 Brassica napus HOM05D008434 ORTHO05D011150 5.3e-29 131.3 127 50.4
BraA02t05984Z Brassica rapa HOM05D008434 ORTHO05D011150 5.3e-29 131.3 127 50.4
AL4G24760 Arabidopsis lyrata HOM05D008434 ORTHO05D011150 4.5e-28 128.3 124 49.2
C02p15330 Brassica napus HOM05D008434 ORTHO05D011150 4.5e-28 128.3 119 51.3
BolC2t07649H Brassica oleracea HOM05D008434 ORTHO05D011150 4.5e-28 128.3 119 51.3
AT4G12617 Arabidopsis thaliana HOM05D008434 ORTHO05D011150 1.3e-27 126.7 125 49.6
BcaB05g22263 Brassica carinata HOM05D008434 ORTHO05D011150 5.0e-27 124.8 127 47.2
AL6G47590 Arabidopsis lyrata HOM05D008434 ORTHO05D011150 9.4e-26 120.6 121 46.3
Carub.0006s3190 Capsella rubella HOM05D008434 ORTHO05D011150 2.3e-24 115.9 120 46.7
AT4G05630 Arabidopsis thaliana HOM05D008434 ORTHO05D011150 1.1e-23 113.6 119 46.2
AL6G47580 Arabidopsis lyrata HOM05D008434 ORTHO05D011150 3.3e-23 112.1 124 45.2
BcaB01g02621 Brassica carinata HOM05D008434 ORTHO05D017634 2.2e-19 99.4 121 38.8
Carub.0004s1109 Capsella rubella HOM05D008434 ORTHO05D011150 8.5e-19 97.4 127 39.4
BraA09t38245Z Brassica rapa HOM05D008434 ORTHO05D024291 5.5e-18 94.7 113 42.5
A09p26730 Brassica napus HOM05D008434 ORTHO05D024291 9.4e-18 94.0 113 42.5
A09p38050 Brassica napus HOM05D008434 ORTHO05D017634 2.7e-17 92.4 121 38.8
BraA09t39315Z Brassica rapa HOM05D008434 ORTHO05D017634 2.7e-17 92.4 121 38.8
BcaC01g04573 Brassica carinata HOM05D008434 ORTHO05D017634 4.7e-17 91.7 121 37.2
A03p29850 Brassica napus HOM05D008434 ORTHO05D017634 4.7e-17 91.7 121 37.2
A08p08990 Brassica napus HOM05D008434 ORTHO05D017634 4.7e-17 91.7 121 37.2
C03p36120 Brassica napus HOM05D008434 ORTHO05D017634 4.7e-17 91.7 121 37.2
BolC3t15921H Brassica oleracea HOM05D008434 ORTHO05D017634 4.7e-17 91.7 121 37.2
BcaC04g21250 Brassica carinata HOM05D008434 ORTHO05D024291 1.8e-16 89.7 113 41.6
C09p33840 Brassica napus HOM05D008434 ORTHO05D024291 1.8e-16 89.7 113 41.6
BolC9t56222H Brassica oleracea HOM05D008434 ORTHO05D024291 1.8e-16 89.7 113 41.6
BraA03t12175Z Brassica rapa HOM05D008434 ORTHO05D017634 3.0e-16 89.0 121 35.5
Carub.0006s3191 Capsella rubella HOM05D008434 ORTHO05D011150 3.9e-16 88.6 124 35.5
BcaB01g01760 Brassica carinata HOM05D008434 ORTHO05D011150 3.7e-14 82.0 113 38.1
Carub.0006s3189 Capsella rubella HOM05D008434 ORTHO05D011150 1.4e-13 80.1 123 38.2
BraA08t32899Z Brassica rapa HOM05D008434 ORTHO05D108508 2.9e-11 72.4 107 34.6
Thhalv10029268m.g Eutrema salsugineum HOM05D008434 ORTHO05D195946 3.2e-10 68.9 124 33.9
BcaB01g02622 Brassica carinata HOM05D008434 ORTHO05D011150 2.7e-09 65.9 64 39.1


User provided reference genes

Program Settings