Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p37900 Brassica napus HOM05D006666 ORTHO05D008276 1.7e-64 249.2 129 100.0
BraA09t39302Z Brassica rapa HOM05D006666 ORTHO05D008276 3.8e-64 248.1 129 99.2
C05p26900 Brassica napus HOM05D006666 ORTHO05D008276 1.2e-57 226.5 129 91.5
BcaC05g26820 Brassica carinata HOM05D006666 ORTHO05D008276 1.5e-57 226.1 129 91.5
BolC5t31408H Brassica oleracea HOM05D006666 ORTHO05D008276 1.5e-57 226.1 129 91.5
Sp1g24340 Schrenkiella parvula HOM05D006666 ORTHO05D008276 9.1e-50 200.3 129 86.0
C07p17240 Brassica napus HOM05D006666 ORTHO05D008276 2.7e-46 188.7 129 81.4
BcaB03g13950 Brassica carinata HOM05D006666 ORTHO05D008276 4.7e-46 188.0 129 79.8
BcaC06g35338 Brassica carinata HOM05D006666 ORTHO05D008276 6.1e-46 187.6 129 80.6
A07p11450 Brassica napus HOM05D006666 ORTHO05D008276 6.1e-46 187.6 129 80.6
BolC7t42228H Brassica oleracea HOM05D006666 ORTHO05D008276 6.1e-46 187.6 129 80.6
BraA07t28933Z Brassica rapa HOM05D006666 ORTHO05D008276 1.0e-45 186.8 129 81.4
Thhalv10009115m.g Eutrema salsugineum HOM05D006666 ORTHO05D008276 2.3e-45 185.7 130 79.2
AL1G41680 Arabidopsis lyrata HOM05D006666 ORTHO05D008276 8.2e-43 177.2 132 76.5
CARHR027620 Cardamine hirsuta HOM05D006666 ORTHO05D008276 4.1e-42 174.9 131 76.3
AT1G28150 Arabidopsis thaliana HOM05D006666 ORTHO05D008276 5.0e-40 167.9 131 72.5
Carub.0001s2658 Capsella rubella HOM05D006666 ORTHO05D008276 1.5e-36 156.4 132 69.7
Aa31sc45G80 Aethionema arabicum HOM05D006666 ORTHO05D008276 6.3e-35 151.0 118 71.2
THA.LOC104812606 Tarenaya hassleriana HOM05D006666 ORTHO05D008276 5.4e-34 147.9 129 65.1
MD14G1247300 Malus domestica HOM05D006666 ORTHO05D008276 4.3e-23 111.7 76 77.6
MSTRG.11567 Avicennia marina HOM05D006666 ORTHO05D008276 9.5e-23 110.5 72 79.2
CSS0032824 Camellia sinensis var. sinensis HOM05D006666 ORTHO05D008276 1.2e-22 110.2 84 71.4
TWI81G0077 Tripterygium wilfordii HOM05D006666 ORTHO05D008276 1.6e-22 109.8 87 64.4
Atru.chr9.23 Acer truncatum HOM05D006666 ORTHO05D008276 2.8e-22 109.0 78 75.6
AUR62037011 Chenopodium quinoa HOM05D006666 ORTHO05D008276 2.8e-22 109.0 85 69.4
TAR629G2781 Trochodendron aralioides HOM05D006666 ORTHO05D008276 2.8e-22 109.0 76 77.6
CiPaw.16G075700 Carya illinoinensis HOM05D006666 ORTHO05D008276 3.6e-22 108.6 87 67.8
Ciclev10023646m.g Citrus clementina HOM05D006666 ORTHO05D008276 3.6e-22 108.6 78 71.8
Dinv09758 Davidia involucrata HOM05D006666 ORTHO05D008276 4.7e-22 108.2 102 60.8
Hund06740 Selenicereus undatus HOM05D006666 ORTHO05D008276 4.7e-22 108.2 103 59.2
Prupe.5G245400 Prunus persica HOM05D006666 ORTHO05D008276 8.0e-22 107.5 76 75.0
PGSC0003DMG400015210 Solanum tuberosum HOM05D006666 ORTHO05D008276 8.0e-22 107.5 76 72.4
Ah.15g090740 Amaranthus hybridus HOM05D006666 ORTHO05D008276 1.0e-21 107.1 83 66.3
Cfa017808 Carpinus fangiana HOM05D006666 ORTHO05D008276 1.0e-21 107.1 136 51.5
AUR62006207 Chenopodium quinoa HOM05D006666 ORTHO05D008276 1.4e-21 106.7 85 68.2
Eucgr.H00663 Eucalyptus grandis HOM05D006666 ORTHO05D008276 1.4e-21 106.7 76 69.7
Potri.004G066900 Populus trichocarpa HOM05D006666 ORTHO05D008276 1.4e-21 106.7 78 71.8
PGR083G1370 Punica granatum HOM05D006666 ORTHO05D008276 1.4e-21 106.7 91 64.8
Haze_18405 Corylus avellana HOM05D006666 ORTHO05D008276 2.3e-21 105.9 137 50.4
Nn4g25066 Nelumbo nucifera HOM05D006666 ORTHO05D008276 2.3e-21 105.9 87 62.1
Nitab4.5_0009307g0050 Nicotiana tabacum HOM05D006666 ORTHO05D008276 3.0e-21 105.5 114 54.4
PSO063G5885 Papaver somniferum HOM05D006666 ORTHO05D008276 6.8e-21 104.4 85 64.7
PSO782G1773 Papaver somniferum HOM05D006666 ORTHO05D008276 6.8e-21 104.4 85 64.7
Solyc03g019880.3 Solanum lycopersicum HOM05D006666 ORTHO05D008276 6.8e-21 104.4 76 69.7
Glyma.10G174200 Glycine max HOM05D006666 ORTHO05D008276 8.9e-21 104.0 76 69.7
RcHm_v2.0_Chr7g0176901 Rosa chinensis HOM05D006666 ORTHO05D008276 8.9e-21 104.0 72 75.0
CAN.G861.22 Capsicum annuum HOM05D006666 ORTHO05D008276 1.2e-20 103.6 76 68.4
FAN04G1657 Fragaria x ananassa HOM05D006666 ORTHO05D008276 1.5e-20 103.2 72 75.0
Manes.02G219900 Manihot esculenta HOM05D006666 ORTHO05D008276 1.5e-20 103.2 78 67.9
Sopen03g029740 Solanum pennellii HOM05D006666 ORTHO05D008276 1.5e-20 103.2 76 69.7
EL10Ac7g16891 Beta vulgaris HOM05D006666 ORTHO05D008276 2.0e-20 102.8 91 62.6
Actinidia02653 Actinidia chinensis HOM05D006666 ORTHO05D008276 4.4e-20 101.7 129 51.9
FAN08G1977 Fragaria x ananassa HOM05D006666 ORTHO05D008276 4.4e-20 101.7 72 73.6
FAN13G2387 Fragaria x ananassa HOM05D006666 ORTHO05D008276 4.4e-20 101.7 72 73.6
FvH4_5g18600 Fragaria vesca HOM05D006666 ORTHO05D008276 7.5e-20 100.9 72 73.6
FAN18G1406 Fragaria x ananassa HOM05D006666 ORTHO05D008276 7.5e-20 100.9 72 73.6
Rhsim08G0006200 Rhododendron simsii HOM05D006666 ORTHO05D008276 7.5e-20 100.9 71 74.6
GSVIVG01024243001 Vitis vinifera HOM05D006666 ORTHO05D008276 9.8e-20 100.5 135 46.7
DCAR_011403 Daucus carota HOM05D006666 ORTHO05D008276 1.3e-19 100.1 120 52.5
Nitab4.5_0008182g0010 Nicotiana tabacum HOM05D006666 ORTHO05D008276 1.3e-19 100.1 124 48.4
Os04g0528100 Oryza sativa ssp. japonica HOM05D006666 ORTHO05D008276 1.3e-19 100.1 90 63.3
SGA_v2.0_scaffold25G10726 Striga asiatica HOM05D006666 ORTHO05D008276 1.3e-19 100.1 95 62.1
Ca_09926_v3 Cicer arietinum L. HOM05D006666 ORTHO05D008276 1.7e-19 99.8 76 67.1
HPP92_021068 Vanilla planifolia HOM05D006666 ORTHO05D008276 1.7e-19 99.8 72 66.7
vmacro17828 Vaccinium macrocarpon HOM05D006666 ORTHO05D008276 2.2e-19 99.4 86 64.0
Cc00_g07700 Coffea canephora HOM05D006666 ORTHO05D008276 2.9e-19 99.0 95 57.9
MBI06_g22566_MAGBIO Magnolia biondii HOM05D006666 ORTHO05D008276 2.9e-19 99.0 96 61.5
Lalb_Chr21g0311701 Lupinus albus HOM05D006666 ORTHO05D008276 3.7e-19 98.6 129 46.5
Migut.O00284 Erythranthe guttata HOM05D006666 ORTHO05D008276 4.9e-19 98.2 75 68.0
unitig_749.g13724 Utricularia gibba HOM05D006666 ORTHO05D008276 4.9e-19 98.2 92 62.0
Lj5g0025802 Lotus japonicus HOM05D006666 ORTHO05D008276 6.4e-19 97.8 76 65.8
MD06G1241100 Malus domestica HOM05D006666 ORTHO05D008276 6.4e-19 97.8 88 64.8
SalBow5G0154 Salvia bowleyana HOM05D006666 ORTHO05D008276 6.4e-19 97.8 75 68.0
Sc10g0008660 Simmondsia chinensis HOM05D006666 ORTHO05D008276 6.4e-19 97.8 86 57.0
CDE04G3444 Ceratophyllum demersum HOM05D006666 ORTHO05D008276 8.3e-19 97.4 76 61.8
Glyma.20G216200 Glycine max HOM05D006666 ORTHO05D008276 1.4e-18 96.7 75 66.7
Gohir.A07G062700 Gossypium hirsutum HOM05D006666 ORTHO05D008276 1.8e-18 96.3 86 58.1
Gorai.001G070900 Gossypium raimondii HOM05D006666 ORTHO05D008276 1.8e-18 96.3 86 58.1
VMungo0720G1342 Vigna mungo HOM05D006666 ORTHO05D008276 1.8e-18 96.3 76 64.5
CDE06G1954 Ceratophyllum demersum HOM05D006666 ORTHO05D008276 3.2e-18 95.5 76 63.2
Peaxi162Scf00171g00030 Petunia axillaris HOM05D006666 ORTHO05D008276 3.2e-18 95.5 76 63.2
TPR.G8870 Trifolium pratense HOM05D006666 ORTHO05D008276 3.2e-18 95.5 76 67.1
Lsat_1_v5_gn_8_1660 Lactuca sativa HOM05D006666 ORTHO05D008276 4.1e-18 95.1 82 63.4
Phvul.L006501 Phaseolus vulgaris HOM05D006666 ORTHO05D008276 4.1e-18 95.1 76 64.5
ECA233G5286 Erigeron canadensis HOM05D006666 ORTHO05D008276 5.4e-18 94.7 69 71.0
Medtr1g077550 Medicago truncatula HOM05D006666 ORTHO05D008276 5.4e-18 94.7 76 63.2
HanXRQChr05g0141151 Helianthus annuus HOM05D006666 ORTHO05D008276 7.0e-18 94.4 111 50.5
Hma1.2p1_0816F.1_g222970 Hydrangea macrophylla HOM05D006666 ORTHO05D008276 7.0e-18 94.4 86 59.3
Sed0024015 Sechium edule HOM05D006666 ORTHO05D008276 7.0e-18 94.4 76 63.2
ATR0124G047 Amborella trichopoda HOM05D006666 ORTHO05D008276 1.6e-17 93.2 86 59.3
MELO3C001965.2 Cucumis melo HOM05D006666 ORTHO05D008276 1.6e-17 93.2 134 46.3
Duzib205G1681 Durio zibethinus HOM05D006666 ORTHO05D008276 1.6e-17 93.2 86 57.0
Gohir.D07G067300 Gossypium hirsutum HOM05D006666 ORTHO05D008276 2.0e-17 92.8 86 57.0
QL10p036477 Quercus lobata HOM05D006666 ORTHO05D008276 3.5e-17 92.0 67 68.7
SalBow1G4610 Salvia bowleyana HOM05D006666 ORTHO05D008276 4.6e-17 91.7 59 72.9
SEGI_19522 Sequoiadendron giganteum HOM05D006666 ORTHO05D008276 4.6e-17 91.7 71 60.6
ClCG04G012450 Citrullus lanatus HOM05D006666 ORTHO05D008276 5.9e-17 91.3 130 42.3
QL10p036089 Quercus lobata HOM05D006666 ORTHO05D008276 7.8e-17 90.9 61 75.4
Thecc.03G072200 Theobroma cacao HOM05D006666 ORTHO05D008276 1.0e-16 90.5 98 53.1
Psat6g054440 Pisum sativum HOM05D006666 ORTHO05D008276 3.0e-16 89.0 82 58.5
Sabra04G0044800 Salix brachista HOM05D006666 ORTHO05D008276 8.6e-16 87.4 65 70.8
Sabra11G0106200 Salix brachista HOM05D006666 ORTHO05D008276 8.6e-16 87.4 65 70.8
Sabra17G0092500 Salix brachista HOM05D006666 ORTHO05D008276 8.6e-16 87.4 65 70.8
arahy.Tifrunner.gnm1.ann1.UGS5Z8 Arachis hypogaea HOM05D006666 ORTHO05D008276 1.9e-15 86.3 103 47.6
COL.COLO4_25502 Corchorus olitorius HOM05D006666 ORTHO05D008276 4.3e-15 85.1 62 71.0
Mapoly0096s0047 Marchantia polymorpha HOM05D006666 ORTHO05D008276 7.3e-15 84.3 76 53.9
Pp3c19_21970 Physcomitrium patens HOM05D006666 ORTHO05D008276 9.5e-15 84.0 64 60.9
CsaV3_1G005250 Cucumis sativus L. HOM05D006666 ORTHO05D008276 1.2e-14 83.6 118 45.8
AagrBONN_evm.TU.Sc2ySwM_344.686 Anthoceros agrestis HOM05D006666 ORTHO05D008276 6.2e-14 81.3 76 53.9
Oeu038394.2 Olea europaea HOM05D006666 ORTHO05D008276 1.1e-13 80.5 64 62.5
Aqoxy3G04334 Aquilegia oxysepala HOM05D006666 ORTHO05D008276 1.4e-13 80.1 81 53.1
SMO143G0007 Selaginella moellendorffii HOM05D006666 ORTHO05D008276 3.1e-13 79.0 88 48.9
COL.COLO4_37022 Corchorus olitorius HOM05D006666 ORTHO05D008276 2.0e-09 66.2 54 66.7
MCO08G267 Micromonas commoda HOM05D006666 ORTHO05D008276 2.0e-09 66.2 49 57.1
PRCOL_00004364 Prasinoderma coloniale HOM05D006666 ORTHO05D008276 1.0e-08 63.9 49 53.1
Hma1.2p1_0816F.1_g222980 Hydrangea macrophylla HOM05D006666 ORTHO05D008276 1.3e-08 63.5 58 58.6
Cre03.g203800 Chlamydomonas reinhardtii HOM05D006666 ORTHO05D008276 3.6e-06 55.5 43 55.8


User provided reference genes

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