Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p37730 Brassica napus HOM05D003630 ORTHO05D004151 7.2e-72 273.9 144 100.0
C05p27220 Brassica napus HOM05D003630 ORTHO05D004151 1.8e-70 269.2 145 99.3
BraA09t39285Z Brassica rapa HOM05D003630 ORTHO05D004151 3.3e-64 248.4 129 100.0
BolC5t31435H Brassica oleracea HOM05D003630 ORTHO05D004151 4.0e-62 241.5 129 96.9
AL1G41920 Arabidopsis lyrata HOM05D003630 ORTHO05D004151 1.0e-57 226.9 131 92.4
CARHR027820 Cardamine hirsuta HOM05D003630 ORTHO05D004151 4.7e-55 218.0 132 90.2
Sp1g24570 Schrenkiella parvula HOM05D003630 ORTHO05D004151 4.7e-55 218.0 132 88.6
BcaB07g32449 Brassica carinata HOM05D003630 ORTHO05D004151 5.0e-49 198.0 117 90.6
BcaC05g26841 Brassica carinata HOM05D003630 ORTHO05D004151 9.5e-48 193.7 117 88.9
THA.LOC104814224 Tarenaya hassleriana HOM05D003630 ORTHO05D004151 1.1e-43 180.3 134 72.4
Carub.0001s2678 Capsella rubella HOM05D003630 ORTHO05D004151 9.2e-43 177.2 120 83.3
Thhalv10009086m.g Eutrema salsugineum HOM05D003630 ORTHO05D004151 1.6e-42 176.4 122 81.1
AT1G28330 Arabidopsis thaliana HOM05D003630 ORTHO05D004151 1.0e-41 173.7 110 89.1
Gorai.009G167500 Gossypium raimondii HOM05D003630 ORTHO05D004151 4.1e-35 151.8 123 58.5
Aa31sc86G60 Aethionema arabicum HOM05D003630 ORTHO05D004151 7.8e-34 147.5 108 71.3
Ciclev10017162m.g Citrus clementina HOM05D003630 ORTHO05D004151 7.8e-34 147.5 129 63.6
Duzib235G1039 Durio zibethinus HOM05D003630 ORTHO05D004151 3.0e-33 145.6 135 60.0
TWI38G1867 Tripterygium wilfordii HOM05D003630 ORTHO05D004151 1.2e-31 140.2 135 60.0
Gohir.A05G159800 Gossypium hirsutum HOM05D003630 ORTHO05D004151 2.8e-31 139.0 117 58.1
Gohir.D05G162500 Gossypium hirsutum HOM05D003630 ORTHO05D004151 1.8e-30 136.3 117 57.3
COL.COLO4_31436 Corchorus olitorius HOM05D003630 ORTHO05D004151 1.2e-29 133.7 129 61.2
Thecc.06G183500 Theobroma cacao HOM05D003630 ORTHO05D004151 1.7e-28 129.8 107 66.4
Dinv17335 Davidia involucrata HOM05D003630 ORTHO05D004151 2.2e-28 129.4 127 63.0
MSTRG.15866 Avicennia marina HOM05D003630 ORTHO05D004151 8.4e-28 127.5 127 59.1
ATR0752G193 Amborella trichopoda HOM05D003630 ORTHO05D004151 1.1e-27 127.1 111 64.9
Duzib160G0312 Durio zibethinus HOM05D003630 ORTHO05D004151 1.1e-27 127.1 117 61.5
SalBow8G2511 Salvia bowleyana HOM05D003630 ORTHO05D004151 1.1e-27 127.1 117 57.3
PGSC0003DMG400029732 Solanum tuberosum HOM05D003630 ORTHO05D004151 1.4e-27 126.7 126 54.8
CSS0033873 Camellia sinensis var. sinensis HOM05D003630 ORTHO05D004151 1.9e-27 126.3 106 62.3
CiPaw.09G062300 Carya illinoinensis HOM05D003630 ORTHO05D004151 1.9e-27 126.3 119 63.0
Cpa.g.sc373.3 Carica papaya HOM05D003630 ORTHO05D004151 3.2e-27 125.6 121 62.8
Manes.16G030000 Manihot esculenta HOM05D003630 ORTHO05D004151 5.4e-27 124.8 107 62.6
Nn1g04163 Nelumbo nucifera HOM05D003630 ORTHO05D004151 5.4e-27 124.8 119 61.3
Potri.004G047100 Populus trichocarpa HOM05D003630 ORTHO05D004151 9.2e-27 124.0 112 63.4
CiPaw.04G030300 Carya illinoinensis HOM05D003630 ORTHO05D004151 1.2e-26 123.6 108 66.7
PGR004G0839 Punica granatum HOM05D003630 ORTHO05D004151 1.2e-26 123.6 124 59.7
TWI38G1513 Tripterygium wilfordii HOM05D003630 ORTHO05D004151 1.2e-26 123.6 133 58.6
CANSAT35G1140 Cannabis sativa HOM05D003630 ORTHO05D004151 2.1e-26 122.9 125 56.0
QL05p041782 Quercus lobata HOM05D003630 ORTHO05D004151 2.7e-26 122.5 123 61.0
Solyc02g077880.3 Solanum lycopersicum HOM05D003630 ORTHO05D004151 2.7e-26 122.5 126 54.8
Sopen02g022730 Solanum pennellii HOM05D003630 ORTHO05D004151 2.7e-26 122.5 126 54.8
CiPaw.10G051200 Carya illinoinensis HOM05D003630 ORTHO05D004151 3.5e-26 122.1 121 55.4
Migut.H01476 Erythranthe guttata HOM05D003630 ORTHO05D004151 3.5e-26 122.1 123 57.7
Lsat_1_v5_gn_7_20981 Lactuca sativa HOM05D003630 ORTHO05D004151 3.5e-26 122.1 106 60.4
Hma1.2p1_0208F.1_g088370 Hydrangea macrophylla HOM05D003630 ORTHO05D004151 4.6e-26 121.7 127 59.8
Oeu056100.2 Olea europaea HOM05D003630 ORTHO05D004151 4.6e-26 121.7 120 57.5
Sed0017838 Sechium edule HOM05D003630 ORTHO05D004151 4.6e-26 121.7 122 59.0
PGSC0003DMG400012826 Solanum tuberosum HOM05D003630 ORTHO05D004151 6.0e-26 121.3 128 53.1
GSVIVG01021092001 Vitis vinifera HOM05D003630 ORTHO05D004151 6.0e-26 121.3 120 57.5
MSTRG.13203 Avicennia marina HOM05D003630 ORTHO05D004151 7.8e-26 120.9 118 56.8
Cc02_g13650 Coffea canephora HOM05D003630 ORTHO05D004151 7.8e-26 120.9 125 52.8
Dinv40586 Davidia involucrata HOM05D003630 ORTHO05D004151 1.0e-25 120.6 110 61.8
RcHm_v2.0_Chr5g0008921 Rosa chinensis HOM05D003630 ORTHO05D004151 1.0e-25 120.6 117 57.3
CSS0037340 Camellia sinensis var. sinensis HOM05D003630 ORTHO05D004151 1.3e-25 120.2 109 59.6
TAR624G0603 Trochodendron aralioides HOM05D003630 ORTHO05D004151 1.3e-25 120.2 118 54.2
BcaC02g11461 Brassica carinata HOM05D003630 ORTHO05D004151 1.7e-25 119.8 112 53.6
Prupe.4G050800 Prunus persica HOM05D003630 ORTHO05D004151 1.7e-25 119.8 121 57.9
Manes.17G047900 Manihot esculenta HOM05D003630 ORTHO05D004151 2.3e-25 119.4 117 59.0
AT2G33830 Arabidopsis thaliana HOM05D003630 ORTHO05D004151 3.0e-25 119.0 113 54.0
ClCG01G023140 Citrullus lanatus HOM05D003630 ORTHO05D004151 3.0e-25 119.0 109 62.4
CsaV3_1G012460 Cucumis sativus L. HOM05D003630 ORTHO05D004151 3.0e-25 119.0 115 62.6
TAR626G1897 Trochodendron aralioides HOM05D003630 ORTHO05D004151 3.0e-25 119.0 121 60.3
arahy.Tifrunner.gnm1.ann1.H8XLFU Arachis hypogaea HOM05D003630 ORTHO05D004151 3.9e-25 118.6 118 61.9
arahy.Tifrunner.gnm1.ann1.S1G93A Arachis hypogaea HOM05D003630 ORTHO05D004151 3.9e-25 118.6 118 61.9
ClCG03G008090 Citrullus lanatus HOM05D003630 ORTHO05D004151 3.9e-25 118.6 115 61.7
C04p15210 Brassica napus HOM05D003630 ORTHO05D004151 5.1e-25 118.2 112 52.7
BolC4t23094H Brassica oleracea HOM05D003630 ORTHO05D004151 5.1e-25 118.2 112 52.7
Migut.M01120 Erythranthe guttata HOM05D003630 ORTHO05D004151 5.1e-25 118.2 124 53.2
arahy.Tifrunner.gnm1.ann1.Q5B35H Arachis hypogaea HOM05D003630 ORTHO05D004151 6.6e-25 117.9 122 59.8
Cfa000510 Carpinus fangiana HOM05D003630 ORTHO05D004151 6.6e-25 117.9 111 60.4
Gohir.A06G129700 Gossypium hirsutum HOM05D003630 ORTHO05D004151 6.6e-25 117.9 118 61.0
Gohir.D06G133900 Gossypium hirsutum HOM05D003630 ORTHO05D004151 6.6e-25 117.9 118 61.0
BcaB02g10597 Brassica carinata HOM05D003630 ORTHO05D004151 8.7e-25 117.5 112 51.8
Lalb_Chr09g0327781 Lupinus albus HOM05D003630 ORTHO05D004151 8.7e-25 117.5 109 66.1
Haze_06402 Corylus avellana HOM05D003630 ORTHO05D004151 1.1e-24 117.1 115 58.3
MELO3C002620.2 Cucumis melo HOM05D003630 ORTHO05D004151 1.1e-24 117.1 115 61.7
A05p11750 Brassica napus HOM05D003630 ORTHO05D004151 1.5e-24 116.7 112 51.8
BraA05t20119Z Brassica rapa HOM05D003630 ORTHO05D004151 1.5e-24 116.7 112 51.8
Gorai.010G155600 Gossypium raimondii HOM05D003630 ORTHO05D004151 1.5e-24 116.7 107 65.4
Atru.chr10.1820 Acer truncatum HOM05D003630 ORTHO05D004151 1.9e-24 116.3 108 60.2
Atru.chr10.1837 Acer truncatum HOM05D003630 ORTHO05D004151 1.9e-24 116.3 108 60.2
Ah.09g237490 Amaranthus hybridus HOM05D003630 ORTHO05D004151 1.9e-24 116.3 122 59.0
A03p18920 Brassica napus HOM05D003630 ORTHO05D004151 1.9e-24 116.3 133 48.1
Carub.0004s1550 Capsella rubella HOM05D003630 ORTHO05D004151 1.9e-24 116.3 113 52.2
Nitab4.5_0003487g0100 Nicotiana tabacum HOM05D003630 ORTHO05D004151 1.9e-24 116.3 124 53.2
Sed0001316 Sechium edule HOM05D003630 ORTHO05D004151 1.9e-24 116.3 115 54.8
AUR62017046 Chenopodium quinoa HOM05D003630 ORTHO05D004151 2.5e-24 115.9 124 56.5
MBI02_g32444_MAGBIO Magnolia biondii HOM05D003630 ORTHO05D004151 2.5e-24 115.9 115 60.0
CSS0035295 Camellia sinensis var. sinensis HOM05D003630 ORTHO05D004151 3.3e-24 115.5 124 60.5
Lj6g0013661 Lotus japonicus HOM05D003630 ORTHO05D004151 3.3e-24 115.5 118 59.3
Nitab4.5_0000516g0130 Nicotiana tabacum HOM05D003630 ORTHO05D004151 3.3e-24 115.5 123 54.5
Oeu012144.1 Olea europaea HOM05D003630 ORTHO05D004151 4.3e-24 115.2 123 56.1
Peaxi162Scf01100g00009 Petunia axillaris HOM05D003630 ORTHO05D004151 5.6e-24 114.8 119 55.5
MELO3C007269.2 Cucumis melo HOM05D003630 ORTHO05D004151 7.3e-24 114.4 109 59.6
ECA236G4733 Erigeron canadensis HOM05D003630 ORTHO05D004151 7.3e-24 114.4 119 54.6
Solyc03g006360.3 Solanum lycopersicum HOM05D003630 ORTHO05D004151 7.3e-24 114.4 129 50.4
Oeu029367.1 Olea europaea HOM05D003630 ORTHO05D004151 9.6e-24 114.0 121 54.5
BcaB01g03917 Brassica carinata HOM05D003630 ORTHO05D004151 1.2e-23 113.6 113 51.3
BcaC01g05821 Brassica carinata HOM05D003630 ORTHO05D004151 1.2e-23 113.6 113 51.3
BcaC01g05822 Brassica carinata HOM05D003630 ORTHO05D004151 1.2e-23 113.6 113 51.3
BraA03t11151Z Brassica rapa HOM05D003630 ORTHO05D004151 1.2e-23 113.6 113 51.3
Sp4g16220 Schrenkiella parvula HOM05D003630 ORTHO05D004151 1.2e-23 113.6 113 50.4
vmacro15923 Vaccinium macrocarpon HOM05D003630 ORTHO05D004151 2.1e-23 112.8 126 54.0
AL4G29600 Arabidopsis lyrata HOM05D003630 ORTHO05D004151 2.8e-23 112.5 114 50.9
unitig_749.g13657 Utricularia gibba HOM05D003630 ORTHO05D004151 3.6e-23 112.1 121 52.9
arahy.Tifrunner.gnm1.ann1.RY2Y1Z Arachis hypogaea HOM05D003630 ORTHO05D004151 4.7e-23 111.7 122 58.2
FvH4_3g08830 Fragaria vesca HOM05D003630 ORTHO05D004151 4.7e-23 111.7 118 55.1
FAN11G3953 Fragaria x ananassa HOM05D003630 ORTHO05D004151 4.7e-23 111.7 118 55.1
FAN16G2355 Fragaria x ananassa HOM05D003630 ORTHO05D004151 4.7e-23 111.7 117 54.7
FAN25G0655 Fragaria x ananassa HOM05D003630 ORTHO05D004151 4.7e-23 111.7 117 54.7
AUR62014851 Chenopodium quinoa HOM05D003630 ORTHO05D004151 6.2e-23 111.3 124 54.0
Sed0024812 Sechium edule HOM05D003630 ORTHO05D004151 6.2e-23 111.3 118 55.9
BolC3t14590H Brassica oleracea HOM05D003630 ORTHO05D004151 1.1e-22 110.5 115 49.6
FAN21G0750 Fragaria x ananassa HOM05D003630 ORTHO05D004151 1.1e-22 110.5 118 54.2
Aqoxy1G02347 Aquilegia oxysepala HOM05D003630 ORTHO05D004151 1.8e-22 109.8 121 59.5
CsaV3_6G050280 Cucumis sativus L. HOM05D003630 ORTHO05D004151 1.8e-22 109.8 109 57.8
SGA_v2.0_scaffold100G29703 Striga asiatica HOM05D003630 ORTHO05D004151 2.4e-22 109.4 120 60.8
VMungo0540G1118 Vigna mungo HOM05D003630 ORTHO05D004151 2.4e-22 109.4 119 56.3
Sc24g0001020 Simmondsia chinensis HOM05D003630 ORTHO05D004151 3.1e-22 109.0 109 56.9
Actinidia07592 Actinidia chinensis HOM05D003630 ORTHO05D004151 4.0e-22 108.6 123 52.8
CARHR127940 Cardamine hirsuta HOM05D003630 ORTHO05D004151 4.0e-22 108.6 114 50.9
Lalb_Chr18g0059451 Lupinus albus HOM05D003630 ORTHO05D004151 4.0e-22 108.6 120 56.7
THA.LOC104812301 Tarenaya hassleriana HOM05D003630 ORTHO05D004151 5.2e-22 108.2 124 48.4
C03p22060 Brassica napus HOM05D003630 ORTHO05D004151 6.9e-22 107.8 104 52.9
CDE11G0243 Ceratophyllum demersum HOM05D003630 ORTHO05D004151 6.9e-22 107.8 108 62.0
Psat1g203680 Pisum sativum HOM05D003630 ORTHO05D004151 6.9e-22 107.8 104 56.7
Phvul.006G183600 Phaseolus vulgaris HOM05D003630 ORTHO05D004151 9.0e-22 107.5 119 54.6
Ca_00350_v3 Cicer arietinum L. HOM05D003630 ORTHO05D004151 1.2e-21 107.1 115 52.2
Lsat_1_v5_gn_1_124360 Lactuca sativa HOM05D003630 ORTHO05D004151 1.2e-21 107.1 101 54.5
Lalb_Chr15g0089711 Lupinus albus HOM05D003630 ORTHO05D004151 1.2e-21 107.1 117 54.7
PGR042G3375 Punica granatum HOM05D003630 ORTHO05D004151 1.2e-21 107.1 119 56.3
Aa31sc652G110 Aethionema arabicum HOM05D003630 ORTHO05D004151 1.5e-21 106.7 114 49.1
Aa31sc652G20 Aethionema arabicum HOM05D003630 ORTHO05D004151 1.5e-21 106.7 114 49.1
DCAR_003387 Daucus carota HOM05D003630 ORTHO05D004151 2.6e-21 105.9 120 52.5
HanXRQChr04g0123791 Helianthus annuus HOM05D003630 ORTHO05D004151 2.6e-21 105.9 111 52.3
CDE05G2086 Ceratophyllum demersum HOM05D003630 ORTHO05D004151 4.4e-21 105.1 109 55.0
TPR.G16501 Trifolium pratense HOM05D003630 ORTHO05D004151 4.4e-21 105.1 116 55.2
C02p44910 Brassica napus HOM05D003630 ORTHO05D004151 7.6e-21 104.4 122 45.9
Thhalv10017461m.g Eutrema salsugineum HOM05D003630 ORTHO05D004151 1.3e-20 103.6 115 49.6
BraA02t07868Z Brassica rapa HOM05D003630 ORTHO05D004151 2.2e-20 102.8 118 45.8
HPP92_018480 Vanilla planifolia HOM05D003630 ORTHO05D004151 2.2e-20 102.8 124 52.4
HPP92_018482 Vanilla planifolia HOM05D003630 ORTHO05D004151 2.2e-20 102.8 124 52.4
BolC2t10526H Brassica oleracea HOM05D003630 ORTHO05D004151 2.9e-20 102.4 118 45.8
Medtr2g014240 Medicago truncatula HOM05D003630 ORTHO05D004151 2.9e-20 102.4 115 53.0
Sp2g09130 Schrenkiella parvula HOM05D003630 ORTHO05D004151 4.9e-20 101.7 122 43.4
HPP92_014190 Vanilla planifolia HOM05D003630 ORTHO05D004151 4.9e-20 101.7 109 45.9
PSO541G4117 Papaver somniferum HOM05D003630 ORTHO05D004151 6.4e-20 101.3 125 54.4
Os11g0671000 Oryza sativa ssp. japonica HOM05D003630 ORTHO05D004151 8.4e-20 100.9 125 50.4
BcaC03g16649 Brassica carinata HOM05D003630 ORTHO05D004151 1.4e-19 100.1 107 48.6
Aa31LG9G8870 Aethionema arabicum HOM05D003630 ORTHO05D004151 1.9e-19 99.8 118 47.5
A02p28330 Brassica napus HOM05D003630 ORTHO05D004151 2.4e-19 99.4 122 43.4
AT5G44300 Arabidopsis thaliana HOM05D003630 ORTHO05D004151 4.2e-19 98.6 122 42.6
Glyma.13G237000 Glycine max HOM05D003630 ORTHO05D004151 4.2e-19 98.6 118 51.7
AL8G15690 Arabidopsis lyrata HOM05D003630 ORTHO05D004151 5.4e-19 98.2 122 42.6
Carub.0008s0422 Capsella rubella HOM05D003630 ORTHO05D004151 9.3e-19 97.4 120 44.2
MD14G1054500 Malus domestica HOM05D003630 ORTHO05D004151 9.3e-19 97.4 97 50.5
EL10Ac8g20421 Beta vulgaris HOM05D003630 ORTHO05D004151 1.2e-18 97.1 128 50.8
Thhalv10003427m.g Eutrema salsugineum HOM05D003630 ORTHO05D004151 1.2e-18 97.1 121 44.6
Sabra04G0029500 Salix brachista HOM05D003630 ORTHO05D004151 1.2e-18 97.1 108 58.3
Glyma.15G076500 Glycine max HOM05D003630 ORTHO05D004151 2.1e-18 96.3 117 49.6
Sed0007569 Sechium edule HOM05D003630 ORTHO05D004151 2.1e-18 96.3 105 54.3
Sc17g0006070 Simmondsia chinensis HOM05D003630 ORTHO05D004151 1.0e-17 94.0 112 50.0
DCAR_008021 Daucus carota HOM05D003630 ORTHO05D004151 3.9e-17 92.0 119 47.1
PSO675G3190 Papaver somniferum HOM05D003630 ORTHO05D004151 6.6e-17 91.3 125 51.2
CARHR178890 Cardamine hirsuta HOM05D003630 ORTHO05D004151 1.1e-16 90.5 122 47.5
HanXRQChr01g0003821 Helianthus annuus HOM05D003630 ORTHO05D004151 1.9e-16 89.7 106 50.9
BcaB07g30534 Brassica carinata HOM05D003630 ORTHO05D004151 3.3e-16 89.0 108 44.4
Sopen03g002370 Solanum pennellii HOM05D003630 ORTHO05D004151 4.3e-16 88.6 118 44.9
SEGI_31386 Sequoiadendron giganteum HOM05D003630 ORTHO05D004151 5.6e-16 88.2 127 47.2
Rhsim02G0132700 Rhododendron simsii HOM05D003630 ORTHO05D004151 1.6e-15 86.7 115 48.7
SMO367G0919 Selaginella moellendorffii HOM05D003630 ORTHO05D004151 1.7e-12 76.6 119 45.4
CAN.G529.26 Capsicum annuum HOM05D003630 ORTHO05D004151 1.9e-11 73.2 72 51.4
Mapoly0057s0054 Marchantia polymorpha HOM05D003630 ORTHO05D004151 2.4e-11 72.8 139 36.7
Pp3c15_6160 Physcomitrium patens HOM05D003630 ORTHO05D004151 5.4e-11 71.6 136 34.6
SMO343G0126 Selaginella moellendorffii HOM05D003630 ORTHO05D004151 6.0e-10 68.2 158 38.6
Aa31LG9G7730 Aethionema arabicum HOM05D003630 ORTHO05D004151 1.3e-09 67.0 87 41.4
AagrBONN_evm.TU.Sc2ySwM_228.5600 Anthoceros agrestis HOM05D003630 ORTHO05D004151 1.3e-09 67.0 151 34.4
COL.COLO4_29750 Corchorus olitorius HOM05D003630 ORTHO05D004151 1.3e-09 67.0 38 78.9
Eucgr.E03257 Eucalyptus grandis HOM05D003630 ORTHO05D004151 6.7e-09 64.7 45 66.7
MD05G1311800 Malus domestica HOM05D003630 ORTHO05D004151 9.6e-08 60.8 43 58.1
Eucgr.D00606 Eucalyptus grandis HOM05D003630 ORTHO05D004151 4.8e-07 58.5 38 68.4
Actinidia26134 Actinidia chinensis HOM05D003630 ORTHO05D004151 8.1e-07 57.8 38 65.8
ECA248G1596 Erigeron canadensis HOM05D000885 ORTHO05D008875 1.4e-06 57.0 38 71.1
AagrBONN_evm.TU.Sc2ySwM_362.1976 Anthoceros agrestis HOM05D003630 ORTHO05D004151 9.0e-06 54.3 38 63.2


User provided reference genes

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