Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p36980 Brassica napus HOM05D004497 ORTHO05D005539 1.1e-249 866.3 462 100.0
BraA09t39216Z Brassica rapa HOM05D004497 ORTHO05D005539 2.5e-222 775.4 439 95.0
BolC5t31537H Brassica oleracea HOM05D004497 ORTHO05D005539 1.4e-206 723.0 420 92.6
C03p75750 Brassica napus HOM05D004497 ORTHO05D005539 3.6e-205 718.4 441 87.5
BolC3t19835H Brassica oleracea HOM05D004497 ORTHO05D005539 4.6e-205 718.0 441 84.8
Sp1g25270 Schrenkiella parvula HOM05D004497 ORTHO05D005539 6.1e-205 717.6 442 86.2
C05p28100 Brassica napus HOM05D004497 ORTHO05D005539 2.3e-204 715.7 422 91.9
BcaC05g26958 Brassica carinata HOM05D004497 ORTHO05D005539 5.1e-204 714.5 422 91.7
Thhalv10007651m.g Eutrema salsugineum HOM05D004497 ORTHO05D005539 9.7e-203 710.3 442 83.0
BcaC01g00099 Brassica carinata HOM05D004497 ORTHO05D005539 6.3e-202 707.6 441 86.6
BraA08t34469Z Brassica rapa HOM05D004497 ORTHO05D005539 6.9e-201 704.1 468 79.3
BcaB07g32523 Brassica carinata HOM05D004497 ORTHO05D005539 1.5e-200 703.0 443 88.0
A08p25140 Brassica napus HOM05D004497 ORTHO05D005539 7.7e-200 700.7 440 84.5
BcaB03g12154 Brassica carinata HOM05D004497 ORTHO05D005539 2.2e-194 682.6 442 83.9
AL1G43130 Arabidopsis lyrata HOM05D004497 ORTHO05D005539 1.6e-192 676.4 469 77.8
Carub.0001s2754 Capsella rubella HOM05D004497 ORTHO05D005539 6.7e-188 661.0 467 71.5
AT1G29320 Arabidopsis thaliana HOM05D004497 ORTHO05D005539 2.2e-186 656.0 472 71.4
CARHR028640 Cardamine hirsuta HOM05D004497 ORTHO05D005539 1.6e-184 649.8 470 70.2
Aa31LG6G6220 Aethionema arabicum HOM05D004497 ORTHO05D005539 7.7e-168 594.3 440 69.1
THA.LOC104820611 Tarenaya hassleriana HOM05D004497 ORTHO05D005539 1.2e-152 543.9 372 69.9
THA.LOC104814264 Tarenaya hassleriana HOM05D004497 ORTHO05D005539 3.1e-148 529.3 371 67.4
Potri.012G095100 Populus trichocarpa HOM05D004497 ORTHO05D005539 4.6e-136 488.8 374 62.3
Sabra15G0114200 Salix brachista HOM05D004497 ORTHO05D005539 1.1e-132 477.6 374 60.4
Potri.015G092400 Populus trichocarpa HOM05D004497 ORTHO05D005539 3.1e-132 476.1 374 60.2
RcHm_v2.0_Chr7g0190661 Rosa chinensis HOM05D004497 ORTHO05D005539 6.9e-132 474.9 368 60.9
GSVIVG01013111001 Vitis vinifera HOM05D004497 ORTHO05D005539 3.4e-131 472.6 370 61.4
CiPaw.08G116800 Carya illinoinensis HOM05D004497 ORTHO05D005539 9.9e-131 471.1 366 61.5
TAR625G0069 Trochodendron aralioides HOM05D004497 ORTHO05D005539 2.2e-130 469.9 370 60.8
Thecc.03G125300 Theobroma cacao HOM05D004497 ORTHO05D005539 6.4e-130 468.4 373 60.6
FAN18G2816 Fragaria x ananassa HOM05D004497 ORTHO05D005539 3.2e-129 466.1 371 59.8
Atru.chr3.3406 Acer truncatum HOM05D004497 ORTHO05D005539 4.2e-129 465.7 437 53.8
CsaV3_1G009480 Cucumis sativus L. HOM05D004497 ORTHO05D005539 7.1e-129 464.9 372 60.5
FvH4_5g07760 Fragaria vesca HOM05D004497 ORTHO05D005539 9.3e-129 464.5 371 59.8
Gohir.A09G246200 Gossypium hirsutum HOM05D004497 ORTHO05D005539 9.3e-129 464.5 385 59.2
Actinidia25597 Actinidia chinensis HOM05D004497 ORTHO05D005539 2.7e-128 463.0 374 58.8
Ciclev10020238m.g Citrus clementina HOM05D004497 ORTHO05D005539 3.5e-128 462.6 367 59.9
FAN08G0052 Fragaria x ananassa HOM05D004497 ORTHO05D005539 4.6e-128 462.2 371 59.8
Gohir.D09G246800 Gossypium hirsutum HOM05D004497 ORTHO05D005539 4.6e-128 462.2 358 62.0
QL10p004476 Quercus lobata HOM05D004497 ORTHO05D005539 7.8e-128 461.5 364 60.4
Haze_07247 Corylus avellana HOM05D004497 ORTHO05D005539 1.7e-127 460.3 365 60.0
FAN04G2053 Fragaria x ananassa HOM05D004497 ORTHO05D005539 2.3e-127 459.9 371 59.6
Cfa013402 Carpinus fangiana HOM05D004497 ORTHO05D005539 3.0e-127 459.5 360 61.1
TWI14G0260 Tripterygium wilfordii HOM05D004497 ORTHO05D005539 3.0e-127 459.5 377 58.1
Gorai.006G271300 Gossypium raimondii HOM05D004497 ORTHO05D005539 8.7e-127 458.0 385 59.0
HanXRQChr05g0153981 Helianthus annuus HOM05D004497 ORTHO05D005539 1.1e-126 457.6 371 59.3
Solyc08g008160.4 Solanum lycopersicum HOM05D004497 ORTHO05D005539 1.1e-126 457.6 374 58.8
PGSC0003DMG400005828 Solanum tuberosum HOM05D004497 ORTHO05D005539 3.3e-126 456.1 374 58.6
ClCG03G003620 Citrullus lanatus HOM05D004497 ORTHO05D005539 5.6e-126 455.3 374 59.4
COL.COLO4_28066 Corchorus olitorius HOM05D004497 ORTHO05D005539 5.6e-126 455.3 356 61.2
Nitab4.5_0000903g0080 Nicotiana tabacum HOM05D004497 ORTHO05D005539 1.3e-125 454.1 374 58.0
Duzib205G0501 Durio zibethinus HOM05D004497 ORTHO05D005539 2.1e-125 453.4 358 60.6
Sed0020059 Sechium edule HOM05D004497 ORTHO05D005539 2.8e-125 453.0 375 58.7
Nitab4.5_0002978g0150 Nicotiana tabacum HOM05D004497 ORTHO05D005539 3.6e-125 452.6 374 58.0
MD14G1161100 Malus domestica HOM05D004497 ORTHO05D005539 4.8e-125 452.2 359 60.7
VMungo0331G1674 Vigna mungo HOM05D004497 ORTHO05D005539 4.8e-125 452.2 372 58.1
Lsat_1_v5_gn_5_13520 Lactuca sativa HOM05D004497 ORTHO05D005539 6.2e-125 451.8 374 59.4
Gohir.A12G276900 Gossypium hirsutum HOM05D004497 ORTHO05D005539 1.1e-124 451.1 359 61.3
Sopen08g004010 Solanum pennellii HOM05D004497 ORTHO05D005539 1.1e-124 451.1 356 60.7
Phvul.003G017500 Phaseolus vulgaris HOM05D004497 ORTHO05D005539 1.4e-124 450.7 370 58.1
CSS0032894 Camellia sinensis var. sinensis HOM05D004497 ORTHO05D005539 3.1e-124 449.5 362 58.8
Cc05_g04600 Coffea canephora HOM05D004497 ORTHO05D005539 3.1e-124 449.5 362 58.8
TAR629G1275 Trochodendron aralioides HOM05D004497 ORTHO05D005539 6.9e-124 448.4 375 57.9
PGR083G2085 Punica granatum HOM05D004497 ORTHO05D005539 9.0e-124 448.0 375 57.9
Lj9A476T57 Lonicera japonica HOM05D004497 ORTHO05D005539 1.2e-123 447.6 340 62.4
QL07p000007 Quercus lobata HOM05D004497 ORTHO05D005539 1.2e-123 447.6 364 59.1
CANSAT56G3508 Cannabis sativa HOM05D004497 ORTHO05D005539 2.6e-123 446.4 372 58.1
ECA246G4485 Erigeron canadensis HOM05D004497 ORTHO05D005539 2.6e-123 446.4 361 59.0
MD06G1147200 Malus domestica HOM05D004497 ORTHO05D005539 2.6e-123 446.4 359 59.1
QL93p0225_0015 Quercus lobata HOM05D004497 ORTHO05D005539 2.6e-123 446.4 364 58.8
Glyma.16G034400 Glycine max HOM05D004497 ORTHO05D005539 3.4e-123 446.0 369 58.0
SalBow8G1477 Salvia bowleyana HOM05D004497 ORTHO05D005539 9.9e-123 444.5 375 57.6
Rhsim08G0187300 Rhododendron simsii HOM05D004497 ORTHO05D005539 2.9e-122 443.0 358 58.4
EL10As4g23444 Beta vulgaris HOM05D004497 ORTHO05D005539 3.8e-122 442.6 364 59.3
QL04p081834 Quercus lobata HOM05D004497 ORTHO05D005539 6.4e-122 441.8 378 57.4
SGA_v2.0_scaffold215G42316 Striga asiatica HOM05D004497 ORTHO05D005539 1.1e-121 441.0 378 56.1
Ah.08g212900 Amaranthus hybridus HOM05D004497 ORTHO05D005539 3.2e-121 439.5 367 59.4
Aqoxy5G03475 Aquilegia oxysepala HOM05D004497 ORTHO05D005539 3.2e-121 439.5 374 56.1
Eucgr.K00186 Eucalyptus grandis HOM05D004497 ORTHO05D005539 2.7e-120 436.4 375 55.5
Hund03342 Selenicereus undatus HOM05D004497 ORTHO05D005539 2.7e-120 436.4 366 57.1
Eucgr.C01065 Eucalyptus grandis HOM05D004497 ORTHO05D005539 6.0e-120 435.3 438 52.3
vmacro20468 Vaccinium macrocarpon HOM05D004497 ORTHO05D005539 7.9e-120 434.9 372 57.5
Migut.I00519 Erythranthe guttata HOM05D004497 ORTHO05D005539 1.0e-119 434.5 377 56.2
Glyma.07G068400 Glycine max HOM05D004497 ORTHO05D005539 1.0e-119 434.5 355 59.4
arahy.Tifrunner.gnm1.ann1.0L2FVX Arachis hypogaea HOM05D004497 ORTHO05D005539 2.3e-119 433.3 360 58.3
FAN13G1359 Fragaria x ananassa HOM05D004497 ORTHO05D005539 2.3e-119 433.3 378 56.1
SalBow5G0098 Salvia bowleyana HOM05D004497 ORTHO05D005539 2.3e-119 433.3 401 53.9
SalBow5G4825 Salvia bowleyana HOM05D004497 ORTHO05D005539 2.3e-119 433.3 401 53.9
arahy.Tifrunner.gnm1.ann1.16KDXT Arachis hypogaea HOM05D004497 ORTHO05D005539 3.0e-119 433.0 360 58.1
Manes.14G053800 Manihot esculenta HOM05D004497 ORTHO05D005539 3.0e-119 433.0 345 59.1
Lalb_Chr03g0040831 Lupinus albus HOM05D004497 ORTHO05D005539 3.9e-119 432.6 372 55.9
Peaxi162Scf00078g00424 Petunia axillaris HOM05D004497 ORTHO05D005539 3.9e-119 432.6 339 60.2
Sc10g0010400 Simmondsia chinensis HOM05D004497 ORTHO05D005539 5.1e-119 432.2 358 56.7
MBI11_g15865_MAGBIO Magnolia biondii HOM05D004497 ORTHO05D005539 1.5e-118 430.6 376 56.1
MELO3C002347.2 Cucumis melo HOM05D004497 ORTHO05D005539 1.9e-118 430.3 340 60.0
Ca_09070_v3 Cicer arietinum L. HOM05D004497 ORTHO05D005539 2.5e-118 429.9 355 58.6
Nn4g26409 Nelumbo nucifera HOM05D004497 ORTHO05D005539 3.3e-118 429.5 379 56.5
Ca_04603_v3 Cicer arietinum L. HOM05D004497 ORTHO05D005539 4.3e-118 429.1 355 58.3
PSO782G0077 Papaver somniferum HOM05D004497 ORTHO05D005539 7.4e-118 428.3 378 55.6
PSO063G4711 Papaver somniferum HOM05D004497 ORTHO05D005539 9.6e-118 427.9 378 55.6
Lj1g0020744 Lotus japonicus HOM05D004497 ORTHO05D005539 1.1e-116 424.5 355 58.9
TPR.G34454 Trifolium pratense HOM05D004497 ORTHO05D005539 1.1e-116 424.5 379 55.4
Dinv11148 Davidia involucrata HOM05D004497 ORTHO05D005539 3.1e-116 422.9 347 58.8
MSTRG.22910 Avicennia marina HOM05D004497 ORTHO05D005539 2.0e-115 420.2 381 54.9
Psat3g028160 Pisum sativum HOM05D004497 ORTHO05D005539 4.5e-115 419.1 444 50.5
Dinv04858 Davidia involucrata HOM05D004497 ORTHO05D005539 1.1e-113 414.5 321 61.1
Oeu005018.3 Olea europaea HOM05D004497 ORTHO05D005539 1.4e-113 414.1 403 51.4
Medtr7g106650 Medicago truncatula HOM05D004497 ORTHO05D005539 2.3e-111 406.8 443 49.0
DCAR_012679 Daucus carota HOM05D004497 ORTHO05D005539 3.3e-110 402.9 354 57.1
CiPaw.11G010200 Carya illinoinensis HOM05D004497 ORTHO05D005539 5.8e-107 392.1 297 63.6
CDE08G0729 Ceratophyllum demersum HOM05D004497 ORTHO05D005539 1.0e-106 391.3 370 51.9
TWI39G1139 Tripterygium wilfordii HOM05D004497 ORTHO05D005539 2.7e-104 383.3 391 50.1
ATR0171G018 Amborella trichopoda HOM05D004497 ORTHO05D005539 1.8e-103 380.6 376 50.0
Prupe.1G584300 Prunus persica HOM05D004497 ORTHO05D005539 2.3e-103 380.2 359 54.0
AUR62025903 Chenopodium quinoa HOM05D004497 ORTHO05D005539 9.6e-102 374.8 358 52.0
HPP92_023861 Vanilla planifolia HOM05D004497 ORTHO05D005539 5.0e-98 362.5 358 49.4
Zm00001eb105680 Zea mays HOM05D004497 ORTHO05D005539 1.1e-97 361.3 387 48.8
Cfa014010 Carpinus fangiana HOM05D004497 ORTHO05D005539 9.3e-97 358.2 362 51.7
AUR62025086 Chenopodium quinoa HOM05D004497 ORTHO05D005539 1.2e-96 357.8 344 51.7
Duzib068G0683 Durio zibethinus HOM05D004497 ORTHO05D005539 6.1e-96 355.5 291 59.8
SEGI_30468 Sequoiadendron giganteum HOM05D004497 ORTHO05D005539 1.0e-95 354.8 377 45.1
AUR62032705 Chenopodium quinoa HOM05D004497 ORTHO05D005539 1.3e-95 354.4 370 49.2
Cpa.g.sc166.23 Carica papaya HOM05D004497 ORTHO05D005539 1.8e-95 354.0 291 56.4
Sed0003097 Sechium edule HOM05D004497 ORTHO05D005539 5.1e-95 352.4 264 62.1
Sabra12G0069700 Salix brachista HOM05D004497 ORTHO05D005539 6.5e-90 335.5 294 55.8
Aqoxy5G03495 Aquilegia oxysepala HOM05D004497 ORTHO05D005539 6.1e-88 328.9 293 53.2
SHI10599 Sapria himalayana HOM05D004497 ORTHO05D005539 5.1e-87 325.9 322 49.7
unitig_699.g19657 Utricularia gibba HOM05D004497 ORTHO05D005539 7.9e-80 302.0 376 44.4
Pp3c13_24500 Physcomitrium patens HOM05D004497 ORTHO05D005539 6.3e-77 292.4 380 43.7
Mapoly0079s0016 Marchantia polymorpha HOM05D004497 ORTHO05D005539 1.1e-76 291.6 357 43.4
SMO165G0173 Selaginella moellendorffii HOM05D004497 ORTHO05D005539 6.5e-74 282.3 362 42.3
AUR62025094 Chenopodium quinoa HOM05D004497 ORTHO05D005539 3.6e-72 276.6 304 47.0
Os07g0506700 Oryza sativa ssp. japonica HOM05D004497 ORTHO05D005539 1.3e-69 268.1 295 46.8
Zm00001eb322320 Zea mays HOM05D004497 ORTHO05D005539 1.8e-63 247.7 203 58.1
vmacro19222 Vaccinium macrocarpon HOM05D004497 ORTHO05D005539 3.7e-61 240.0 236 52.1
Nitab4.5_0003013g0030 Nicotiana tabacum HOM05D004497 ORTHO05D005539 5.9e-59 232.6 340 41.5
AUR62029644 Chenopodium quinoa HOM05D004497 ORTHO05D005539 4.0e-55 219.9 226 49.6
AagrBONN_evm.TU.Sc2ySwM_344.3271 Anthoceros agrestis HOM05D000006 ORTHO05D004030 8.9e-47 192.2 304 39.8
CBR_g31949 Chara braunii HOM05D004497 ORTHO05D005539 4.4e-46 189.9 355 35.2
SalBow8G1815 Salvia bowleyana HOM05D004497 ORTHO05D005539 9.8e-46 188.7 140 65.0
Ca_16680_v3 Cicer arietinum L. HOM05D000160 ORTHO05D000496 4.9e-45 186.4 139 61.9
Actinidia19491 Actinidia chinensis HOM05D004497 ORTHO05D005539 3.3e-41 173.7 320 34.4
AUR62025088 Chenopodium quinoa HOM05D004497 ORTHO05D005539 3.4e-38 163.7 231 40.3
AUR62025079 Chenopodium quinoa HOM05D004497 ORTHO05D005539 7.5e-38 162.5 158 51.3
RcHm_v2.0_Chr0c30g0501231 Rosa chinensis HOM05D004497 ORTHO05D005539 3.2e-36 157.1 358 33.2
RcHm_v2.0_Chr3g0452771 Rosa chinensis HOM05D004497 ORTHO05D005539 3.2e-36 157.1 358 33.2
RcHm_v2.0_Chr5g0041021 Rosa chinensis HOM05D004497 ORTHO05D005539 1.8e-31 141.4 374 29.7
MCO03G018 Micromonas commoda HOM05D004497 ORTHO05D005539 4.7e-24 116.7 245 30.2
C04p39580 Brassica napus HOM05D004497 ORTHO05D005539 6.2e-24 116.3 86 70.9
BolC4t25523H Brassica oleracea HOM05D004497 ORTHO05D005539 6.2e-24 116.3 86 70.9
Cre17.g718650 Chlamydomonas reinhardtii HOM05D004497 ORTHO05D005539 8.1e-24 115.9 398 25.9
PRCOL_00003967 Prasinoderma coloniale HOM05D004497 ORTHO05D005539 1.4e-20 105.1 182 34.1
TAR371G1248 Trochodendron aralioides HOM05D004497 ORTHO05D005539 4.6e-19 100.1 88 51.1
Gohir.D13G181701 Gossypium hirsutum HOM05D004497 ORTHO05D005539 3.6e-16 90.5 104 48.1
AUR62025092 Chenopodium quinoa HOM05D004497 ORTHO05D005539 4.9e-13 80.1 53 67.9
Oeu006698.1 Olea europaea HOM05D004497 ORTHO05D005539 2.1e-11 74.7 79 49.4
Phvul.003G017700 Phaseolus vulgaris HOM05D004497 ORTHO05D005539 2.4e-07 61.2 68 45.6
COL.COLO4_36170 Corchorus olitorius HOM05D021494 ORTHO05D022415 9.0e-07 59.3 41 68.3
ECA248G2349 Erigeron canadensis HOM05D000041 ORTHO05D000452 3.4e-06 57.4 50 56.0


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