Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p36260 Brassica napus HOM05D006325 ORTHO05D007878 2.5e-44 181.8 98 100.0
BraA09t39151Z Brassica rapa HOM05D006325 ORTHO05D007878 2.4e-42 175.3 98 99.0
BcaC05g27053 Brassica carinata HOM05D006325 ORTHO05D007878 1.3e-40 169.5 99 97.0
BolC5t31641H Brassica oleracea HOM05D006325 ORTHO05D007878 1.3e-40 169.5 99 97.0
C05p29100 Brassica napus HOM05D006325 ORTHO05D007878 6.5e-40 167.2 99 96.0
BcaB07g32625 Brassica carinata HOM05D006325 ORTHO05D007878 1.4e-39 166.0 98 92.9
BcaC06g35496 Brassica carinata HOM05D006325 ORTHO05D007878 6.1e-30 134.0 98 79.6
BcaB03g13839 Brassica carinata HOM05D006325 ORTHO05D007878 2.3e-29 132.1 98 78.6
A07p10030 Brassica napus HOM05D006325 ORTHO05D007878 5.7e-28 127.5 93 80.6
BraA07t28796Z Brassica rapa HOM05D006325 ORTHO05D007878 5.7e-28 127.5 93 80.6
BolC7t42032H Brassica oleracea HOM05D006325 ORTHO05D007878 1.7e-27 125.9 93 79.6
Thhalv10009295m.g Eutrema salsugineum HOM05D006325 ORTHO05D007878 1.1e-26 123.2 99 77.8
AL1G44210 Arabidopsis lyrata HOM05D006325 ORTHO05D007878 7.0e-26 120.6 100 77.0
Sp1g26100 Schrenkiella parvula HOM05D006325 ORTHO05D007878 1.3e-24 116.3 99 76.8
Carub.0001s2849 Capsella rubella HOM05D006325 ORTHO05D007878 7.2e-23 110.5 99 71.7
AT1G30260 Arabidopsis thaliana HOM05D006325 ORTHO05D007878 3.3e-20 101.7 100 66.0
CARHR029650 Cardamine hirsuta HOM05D006325 ORTHO05D007878 3.7e-19 98.2 98 63.3
Aa31LG6G5500 Aethionema arabicum HOM05D006325 ORTHO05D007878 4.0e-13 78.2 100 54.0
Prupe.4G084800 Prunus persica HOM05D006325 ORTHO05D007878 1.3e-11 73.2 55 72.7
CANSAT35G0285 Cannabis sativa HOM05D006325 ORTHO05D007878 1.1e-10 70.1 52 75.0
Nitab4.5_0003551g0100 Nicotiana tabacum HOM05D006325 ORTHO05D007878 1.4e-10 69.7 92 54.3
ClCG01G024840 Citrullus lanatus HOM05D006325 ORTHO05D007878 2.4e-10 68.9 59 62.7
FvH4_3g05130 Fragaria vesca HOM05D006325 ORTHO05D007878 2.4e-10 68.9 72 59.7
TWI09G0296 Tripterygium wilfordii HOM05D006325 ORTHO05D007878 3.1e-10 68.6 73 57.5
MD10G1258900 Malus domestica HOM05D006325 ORTHO05D007878 5.4e-10 67.8 98 49.0
RcHm_v2.0_Chr5g0014631 Rosa chinensis HOM05D006325 ORTHO05D007878 5.4e-10 67.8 75 54.7
Hma1.2p1_0594F.1_g185940 Hydrangea macrophylla HOM05D006325 ORTHO05D007878 9.1e-10 67.0 95 47.4
Nn3g20453 Nelumbo nucifera HOM05D006325 ORTHO05D007878 9.1e-10 67.0 94 50.0
Nitab4.5_0002611g0130 Nicotiana tabacum HOM05D006325 ORTHO05D007878 1.2e-09 66.6 80 52.5
FAN11G2857 Fragaria x ananassa HOM05D006325 ORTHO05D007878 1.6e-09 66.2 57 66.7
CAN.G160.11 Capsicum annuum HOM05D006325 ORTHO05D007878 2.0e-09 65.9 95 48.4
FAN21G1261 Fragaria x ananassa HOM05D006325 ORTHO05D007878 2.0e-09 65.9 57 66.7
FAN25G3009 Fragaria x ananassa HOM05D006325 ORTHO05D007878 2.0e-09 65.9 57 66.7
PGSC0003DMG400011149 Solanum tuberosum HOM05D006325 ORTHO05D007878 2.7e-09 65.5 68 57.4
PGSC0003DMG403011204 Solanum tuberosum HOM05D006325 ORTHO05D007878 2.7e-09 65.5 95 51.6
PGSC0003DMG402022984 Solanum tuberosum HOM05D006325 ORTHO05D007878 3.5e-09 65.1 95 49.5
Glyma.05G143000 Glycine max HOM05D006325 ORTHO05D007878 4.5e-09 64.7 55 63.6
Lalb_Chr13g0293971 Lupinus albus HOM05D006325 ORTHO05D007878 4.5e-09 64.7 73 50.7
Nitab4.5_0003551g0110 Nicotiana tabacum HOM05D006325 ORTHO05D007878 4.5e-09 64.7 75 57.3
Ciclev10017179m.g Citrus clementina HOM05D006325 ORTHO05D007878 5.9e-09 64.3 99 43.4
Thecc.06G145500 Theobroma cacao HOM05D006325 ORTHO05D007878 5.9e-09 64.3 98 44.9
CSS0005499 Camellia sinensis var. sinensis HOM05D006325 ORTHO05D007878 7.7e-09 63.9 67 56.7
CSS0005985 Camellia sinensis var. sinensis HOM05D006325 ORTHO05D007878 7.7e-09 63.9 67 56.7
FAN16G1041 Fragaria x ananassa HOM05D006325 ORTHO05D007878 1.3e-08 63.2 57 64.9
FAN16G2667 Fragaria x ananassa HOM05D006325 ORTHO05D007878 1.3e-08 63.2 57 64.9
PGSC0003DMG401022984 Solanum tuberosum HOM05D006325 ORTHO05D007878 1.3e-08 63.2 69 50.7
TWI53G1846 Tripterygium wilfordii HOM05D006325 ORTHO05D007878 1.3e-08 63.2 112 42.0
QL05p055432 Quercus lobata HOM05D006325 ORTHO05D007878 1.7e-08 62.8 44 63.6
Cpa.g.sc17.42 Carica papaya HOM05D006325 ORTHO05D007878 2.2e-08 62.4 97 44.3
MELO3C007112.2 Cucumis melo HOM05D006325 ORTHO05D007878 2.2e-08 62.4 90 46.7
Lsat_1_v5_gn_0_34220 Lactuca sativa HOM05D006325 ORTHO05D007878 2.2e-08 62.4 47 63.8
Potri.011G081001 Populus trichocarpa HOM05D006325 ORTHO05D007878 2.2e-08 62.4 98 40.8
Ca_18164_v3 Cicer arietinum L. HOM05D006325 ORTHO05D007878 2.9e-08 62.0 82 46.3
Ciclev10026747m.g Citrus clementina HOM05D006325 ORTHO05D007878 2.9e-08 62.0 76 53.9
CsaV3_6G051960 Cucumis sativus L. HOM05D006325 ORTHO05D007878 2.9e-08 62.0 90 44.4
Gohir.A06G139600 Gossypium hirsutum HOM05D006325 ORTHO05D007878 2.9e-08 62.0 62 59.7
Manes.17G073700 Manihot esculenta HOM05D006325 ORTHO05D007878 3.8e-08 61.6 40 72.5
CAN.G2122.2 Capsicum annuum HOM05D006325 ORTHO05D007878 5.0e-08 61.2 43 67.4
DCAR_007876 Daucus carota HOM05D006325 ORTHO05D007878 5.0e-08 61.2 44 63.6
PSO541G2396 Papaver somniferum HOM05D006325 ORTHO05D007878 5.0e-08 61.2 99 48.5
Solyc11g020860.1 Solanum lycopersicum HOM05D006325 ORTHO05D007878 5.0e-08 61.2 44 65.9
Sopen07g002000 Solanum pennellii HOM05D006325 ORTHO05D007878 5.0e-08 61.2 39 74.4
Sopen11g011030 Solanum pennellii HOM05D006325 ORTHO05D007878 5.0e-08 61.2 51 60.8
MELO3C002763.2 Cucumis melo HOM05D006325 ORTHO05D007878 6.5e-08 60.8 71 53.5
Glyma.08G099000 Glycine max HOM05D006325 ORTHO05D007878 6.5e-08 60.8 68 50.0
Lsat_1_v5_gn_7_27621 Lactuca sativa HOM05D006325 ORTHO05D007878 6.5e-08 60.8 98 41.8
Lalb_Chr07g0187521 Lupinus albus HOM05D006325 ORTHO05D007878 6.5e-08 60.8 51 62.7
CsaV3_1G036810 Cucumis sativus L. HOM05D006325 ORTHO05D007878 8.5e-08 60.5 72 51.4
Nitab4.5_0008310g0030 Nicotiana tabacum HOM05D006325 ORTHO05D007878 8.5e-08 60.5 63 47.6
Phvul.002G178300 Phaseolus vulgaris HOM05D006325 ORTHO05D007878 8.5e-08 60.5 65 53.8
Phvul.002G179400 Phaseolus vulgaris HOM05D006325 ORTHO05D007878 8.5e-08 60.5 65 53.8
Potri.004G133180 Populus trichocarpa HOM05D006325 ORTHO05D007878 8.5e-08 60.5 98 42.9
PGSC0003DMG400009263 Solanum tuberosum HOM05D006325 ORTHO05D007878 8.5e-08 60.5 39 71.8
Sabra11G0064500 Salix brachista HOM05D006325 ORTHO05D007878 1.1e-07 60.1 69 44.9
Sed0008419 Sechium edule HOM05D006325 ORTHO05D007878 1.1e-07 60.1 67 49.3
CAN.G160.12 Capsicum annuum HOM05D006325 ORTHO05D007878 1.5e-07 59.7 75 49.3
Ciclev10026858m.g Citrus clementina HOM05D006325 ORTHO05D007878 1.5e-07 59.7 76 52.6
Cc00_g01980 Coffea canephora HOM05D006325 ORTHO05D007878 1.5e-07 59.7 70 48.6
Gorai.010G168000 Gossypium raimondii HOM05D006325 ORTHO05D007878 1.5e-07 59.7 62 58.1
Psat7g080440 Pisum sativum HOM05D006325 ORTHO05D007878 1.5e-07 59.7 57 54.4
Aa31LG6G3080 Aethionema arabicum HOM05D012071 ORTHO05D013970 1.9e-07 59.3 44 72.7
CAN.G160.10 Capsicum annuum HOM05D006325 ORTHO05D007878 1.9e-07 59.3 73 50.7
CAN.G160.9 Capsicum annuum HOM05D006325 ORTHO05D007878 1.9e-07 59.3 43 65.1
Eucgr.D00273 Eucalyptus grandis HOM05D006325 ORTHO05D007878 1.9e-07 59.3 89 49.4
Gohir.D05G149100 Gossypium hirsutum HOM05D006325 ORTHO05D007878 1.9e-07 59.3 88 40.9
Psat7g080360 Pisum sativum HOM05D006325 ORTHO05D007878 1.9e-07 59.3 76 48.7
Medtr5g077680 Medicago truncatula HOM05D006325 ORTHO05D007878 2.5e-07 58.9 47 59.6
Medtr8g079458 Medicago truncatula HOM05D006325 ORTHO05D007878 2.5e-07 58.9 47 59.6
Peaxi162Scf00062g00009 Petunia axillaris HOM05D006325 ORTHO05D007878 2.5e-07 58.9 71 47.9
QL04p045948 Quercus lobata HOM05D006325 ORTHO05D007878 2.5e-07 58.9 71 50.7
Duzib192G0952 Durio zibethinus HOM05D006325 ORTHO05D007878 3.2e-07 58.5 103 41.7
Gohir.D06G144350 Gossypium hirsutum HOM05D006325 ORTHO05D007878 3.2e-07 58.5 102 43.1
Lj4g0007216 Lotus japonicus HOM05D006325 ORTHO05D007878 3.2e-07 58.5 54 61.1
Nn4g26622 Nelumbo nucifera HOM05D006325 ORTHO05D007878 3.2e-07 58.5 50 60.0
CAN.G2122.1 Capsicum annuum HOM05D006325 ORTHO05D007878 4.2e-07 58.2 74 52.7
MBI02_g07020_MAGBIO Magnolia biondii HOM05D006325 ORTHO05D007878 4.2e-07 58.2 51 66.7
Medtr1437s0010 Medicago truncatula HOM05D006325 ORTHO05D007878 4.2e-07 58.2 47 57.4
TPR.G13312 Trifolium pratense HOM05D006325 ORTHO05D007878 5.5e-07 57.8 58 56.9
Medtr4g012020 Medicago truncatula HOM05D006325 ORTHO05D007878 7.2e-07 57.4 47 57.4
Medtr4g083110 Medicago truncatula HOM05D006325 ORTHO05D007878 7.2e-07 57.4 75 46.7
TPR.G34042 Trifolium pratense HOM05D006325 ORTHO05D007878 7.2e-07 57.4 47 59.6
Medtr5g077640 Medicago truncatula HOM05D006325 ORTHO05D007878 9.4e-07 57.0 82 46.3
QL04p045922 Quercus lobata HOM05D006325 ORTHO05D007878 9.4e-07 57.0 68 48.5
AT4G21060 Arabidopsis thaliana HOM05D000777 ORTHO05D000595 1.2e-06 56.6 41 75.6
CARHR227630 Cardamine hirsuta HOM05D012071 ORTHO05D013970 1.2e-06 56.6 41 75.6
Gorai.009G153100 Gossypium raimondii HOM05D006325 ORTHO05D007878 1.2e-06 56.6 98 37.8
BcaC09g51267 Brassica carinata HOM05D012071 ORTHO05D013970 1.6e-06 56.2 39 79.5
A01p12410 Brassica napus HOM05D000777 ORTHO05D000595 1.6e-06 56.2 39 79.5
A03p52620 Brassica napus HOM05D012071 ORTHO05D013970 1.6e-06 56.2 39 79.5
C01p14990 Brassica napus HOM05D012071 ORTHO05D013970 1.6e-06 56.2 39 79.5
C07p51060 Brassica napus HOM05D012071 ORTHO05D013970 1.6e-06 56.2 39 79.5
BolC1t01447H Brassica oleracea HOM05D000777 ORTHO05D000595 1.6e-06 56.2 39 79.5
BraA01t01187Z Brassica rapa HOM05D000777 ORTHO05D000595 1.6e-06 56.2 39 79.5
BraA03t14336Z Brassica rapa HOM05D012071 ORTHO05D013970 1.6e-06 56.2 39 79.5
Gohir.A05G146600 Gossypium hirsutum HOM05D006325 ORTHO05D007878 1.6e-06 56.2 88 39.8
Sed0022207 Sechium edule HOM05D006325 ORTHO05D007878 1.6e-06 56.2 74 51.4
TPR.G21965 Trifolium pratense HOM05D006325 ORTHO05D007878 1.6e-06 56.2 58 53.4
Lj4g0010729 Lotus japonicus HOM05D006325 ORTHO05D007878 2.1e-06 55.8 49 61.2
Psat7g080320 Pisum sativum HOM05D006325 ORTHO05D007878 2.1e-06 55.8 74 47.3
Haze_05647 Corylus avellana HOM05D006325 ORTHO05D007878 2.7e-06 55.5 41 65.9
Sopen07g002010 Solanum pennellii HOM05D006325 ORTHO05D007878 2.7e-06 55.5 77 50.6
Duzib160G0583 Durio zibethinus HOM05D006325 ORTHO05D007878 3.6e-06 55.1 74 51.4
MBI18_g11235_MAGBIO Magnolia biondii HOM05D006325 ORTHO05D007878 3.6e-06 55.1 38 68.4
BolC7t45606H Brassica oleracea HOM05D012071 ORTHO05D013970 6.1e-06 54.3 38 78.9
Gohir.A10G043400 Gossypium hirsutum HOM05D006325 ORTHO05D007878 6.1e-06 54.3 58 58.6
Gohir.D10G044600 Gossypium hirsutum HOM05D006325 ORTHO05D007878 6.1e-06 54.3 58 58.6
Gorai.011G047600 Gossypium raimondii HOM05D006325 ORTHO05D007878 6.1e-06 54.3 58 58.6
Oeu030957.1 Olea europaea HOM05D006325 ORTHO05D007878 6.1e-06 54.3 87 40.2


User provided reference genes

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