Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p35370 Brassica napus HOM05D007073 ORTHO05D008855 1.9e-57 225.7 119 100.0
BcaC05g27117 Brassica carinata HOM05D007073 ORTHO05D008855 3.2e-57 224.9 119 99.2
BcaC05g27119 Brassica carinata HOM05D007073 ORTHO05D008855 3.2e-57 224.9 119 99.2
C05p29970 Brassica napus HOM05D007073 ORTHO05D008855 3.2e-57 224.9 119 99.2
BolC5t31732H Brassica oleracea HOM05D007073 ORTHO05D008855 3.2e-57 224.9 119 99.2
BolC5t31736H Brassica oleracea HOM05D007073 ORTHO05D008855 3.2e-57 224.9 119 99.2
BcaB07g32745 Brassica carinata HOM05D007073 ORTHO05D008855 6.6e-55 217.2 117 97.4
Thhalv10009135m.g Eutrema salsugineum HOM05D007073 ORTHO05D008855 6.2e-53 210.7 119 94.1
Sp1g26740 Schrenkiella parvula HOM05D007073 ORTHO05D008855 2.4e-52 208.8 119 93.3
Carub.0001s2918 Capsella rubella HOM05D007073 ORTHO05D008855 5.3e-52 207.6 119 91.6
CARHR030330 Cardamine hirsuta HOM05D007073 ORTHO05D008855 1.2e-51 206.5 119 91.6
C05p29960 Brassica napus HOM05D007073 ORTHO05D008855 7.1e-49 197.2 103 98.1
Aa31LG6G9870 Aethionema arabicum HOM05D007073 ORTHO05D008855 9.3e-49 196.8 119 84.9
AT1G30845 Arabidopsis thaliana HOM05D007073 ORTHO05D008855 3.5e-48 194.9 119 86.6
THA.LOC104810648 Tarenaya hassleriana HOM05D007073 ORTHO05D008855 1.8e-44 182.6 119 79.8
AL1G45120 Arabidopsis lyrata HOM05D007073 ORTHO05D008855 4.9e-42 174.5 179 59.2
GSVIVG01009840001 Vitis vinifera HOM05D007073 ORTHO05D008855 2.4e-41 172.2 113 79.6
Sabra05G0182000 Salix brachista HOM05D007073 ORTHO05D008855 1.2e-40 169.9 112 78.6
Potri.005G235800 Populus trichocarpa HOM05D007073 ORTHO05D008855 3.5e-40 168.3 112 78.6
Atru.chr13.338 Acer truncatum HOM05D007073 ORTHO05D008855 4.6e-40 167.9 113 75.2
Hma1.2p1_0773F.1_g216240 Hydrangea macrophylla HOM05D007073 ORTHO05D008855 4.6e-40 167.9 113 75.2
AUR62019145 Chenopodium quinoa HOM05D007073 ORTHO05D008855 2.3e-39 165.6 119 70.6
CSS0049768 Camellia sinensis var. sinensis HOM05D007073 ORTHO05D008855 3.0e-39 165.2 112 73.2
TWI56G0686 Tripterygium wilfordii HOM05D007073 ORTHO05D008855 5.1e-39 164.5 112 74.1
Dinv31819 Davidia involucrata HOM05D007073 ORTHO05D008855 8.7e-39 163.7 113 74.3
COL.COLO4_26179 Corchorus olitorius HOM05D007073 ORTHO05D008855 1.5e-38 162.9 111 73.0
Eucgr.H01040 Eucalyptus grandis HOM05D007073 ORTHO05D008855 1.5e-38 162.9 111 76.6
RcHm_v2.0_Chr6g0272121 Rosa chinensis HOM05D007073 ORTHO05D008855 1.5e-38 162.9 117 68.4
Eucgr.L01253 Eucalyptus grandis HOM05D007073 ORTHO05D008855 1.9e-38 162.5 111 75.7
Psat7g072280 Pisum sativum HOM05D007073 ORTHO05D008855 1.9e-38 162.5 110 75.5
FvH4_5g30190 Fragaria vesca HOM05D007073 ORTHO05D008855 4.3e-38 161.4 113 70.8
Glyma.08G113800 Glycine max HOM05D007073 ORTHO05D008855 4.3e-38 161.4 113 72.6
PSO675G5408 Papaver somniferum HOM05D007073 ORTHO05D008855 1.3e-37 159.8 110 72.7
RhsimUnG0148500 Rhododendron simsii HOM05D007073 ORTHO05D008855 1.3e-37 159.8 112 74.1
TAR628G0116 Trochodendron aralioides HOM05D007073 ORTHO05D008855 1.3e-37 159.8 113 72.6
EL10Ac1g00450 Beta vulgaris HOM05D007073 ORTHO05D008855 1.6e-37 159.5 119 68.1
Haze_22602 Corylus avellana HOM05D000624 ORTHO05D000495 2.1e-37 159.1 107 73.8
Migut.C00802 Erythranthe guttata HOM05D007073 ORTHO05D008855 2.1e-37 159.1 113 73.5
Nn5g29254 Nelumbo nucifera HOM05D007073 ORTHO05D008855 2.1e-37 159.1 113 72.6
PSO541G6379 Papaver somniferum HOM05D007073 ORTHO05D008855 2.1e-37 159.1 110 72.7
TPR.G24371 Trifolium pratense HOM05D007073 ORTHO05D008855 2.1e-37 159.1 111 73.9
Ca_17949_v3 Cicer arietinum L. HOM05D007073 ORTHO05D008855 2.8e-37 158.7 111 72.1
Zm00001eb403590 Zea mays HOM05D007073 ORTHO05D008855 2.8e-37 158.7 110 72.7
CANSAT25G0010 Cannabis sativa HOM05D007073 ORTHO05D008855 4.8e-37 157.9 108 71.3
Solyc04g081160.3 Solanum lycopersicum HOM05D007073 ORTHO05D008855 4.8e-37 157.9 110 72.7
Sopen04g034780 Solanum pennellii HOM05D007073 ORTHO05D008855 4.8e-37 157.9 110 72.7
Manes.18G016450 Manihot esculenta HOM05D007073 ORTHO05D008855 6.2e-37 157.5 113 71.7
Peaxi162Scf00287g01620 Petunia axillaris HOM05D007073 ORTHO05D008855 6.2e-37 157.5 110 70.9
Sed0011824 Sechium edule HOM05D007073 ORTHO05D008855 6.2e-37 157.5 111 72.1
Cc04_g14740 Coffea canephora HOM05D007073 ORTHO05D008855 8.1e-37 157.1 111 71.2
HanXRQChr02g0044001 Helianthus annuus HOM05D007073 ORTHO05D008855 1.1e-36 156.8 113 71.7
QL02p010904 Quercus lobata HOM05D007073 ORTHO05D008855 1.1e-36 156.8 112 69.6
Zm00001eb001980 Zea mays HOM05D007073 ORTHO05D008855 1.4e-36 156.4 110 72.7
ClCG08G014440 Citrullus lanatus HOM05D007073 ORTHO05D008855 1.8e-36 156.0 111 71.2
Duzib093G1738 Durio zibethinus HOM05D007073 ORTHO05D008855 1.8e-36 156.0 113 68.1
SGA_v2.0_scaffold92G28274 Striga asiatica HOM05D007073 ORTHO05D008855 1.8e-36 156.0 113 71.7
PGSC0003DMG400003718 Solanum tuberosum HOM05D007073 ORTHO05D008855 2.4e-36 155.6 110 71.8
vmacro21707 Vaccinium macrocarpon HOM05D007073 ORTHO05D008855 2.4e-36 155.6 114 71.1
Lj4g0003370 Lotus japonicus HOM05D007073 ORTHO05D008855 3.1e-36 155.2 111 73.0
SalBow7G2056 Salvia bowleyana HOM05D007073 ORTHO05D008855 3.1e-36 155.2 113 70.8
Medtr8g085700 Medicago truncatula HOM05D007073 ORTHO05D008855 4.0e-36 154.8 112 70.5
Oeu054729.1 Olea europaea HOM05D007073 ORTHO05D008855 4.0e-36 154.8 108 73.1
Cc02_g29940 Coffea canephora HOM05D007073 ORTHO05D008855 5.3e-36 154.5 111 69.4
CAN.G1271.5 Capsicum annuum HOM05D007073 ORTHO05D008855 9.0e-36 153.7 110 72.7
RcHm_v2.0_Chr6g0302381 Rosa chinensis HOM05D007073 ORTHO05D008855 1.2e-35 153.3 113 68.1
CDE08G0828 Ceratophyllum demersum HOM05D007073 ORTHO05D008855 2.0e-35 152.5 111 69.4
Lalb_Chr12g0205331 Lupinus albus HOM05D007073 ORTHO05D008855 2.6e-35 152.1 111 70.3
CsaV3_2G029360 Cucumis sativus L. HOM05D007073 ORTHO05D008855 3.4e-35 151.8 111 70.3
PGR031G0624 Punica granatum HOM05D007073 ORTHO05D008855 3.4e-35 151.8 112 68.8
SGA_v2.0_scaffold92G28275 Striga asiatica HOM05D007073 ORTHO05D008855 4.5e-35 151.4 111 71.2
ECA247G1834 Erigeron canadensis HOM05D007073 ORTHO05D008855 7.6e-35 150.6 113 69.0
VMungo0251G2135 Vigna mungo HOM05D007073 ORTHO05D008855 7.6e-35 150.6 111 69.4
Lsat_1_v5_gn_1_16141 Lactuca sativa HOM05D007073 ORTHO05D008855 1.7e-34 149.4 113 67.3
Phvul.002G236200 Phaseolus vulgaris HOM05D007073 ORTHO05D008855 6.5e-34 147.5 111 69.4
unitig_32.g11146 Utricularia gibba HOM05D007073 ORTHO05D008855 1.1e-33 146.7 107 70.1
CANSAT11G0546 Cannabis sativa HOM05D007073 ORTHO05D008855 1.4e-33 146.4 114 69.3
Sc26g0003150 Simmondsia chinensis HOM05D007073 ORTHO05D008855 1.4e-33 146.4 113 68.1
Rhsim06G0025500 Rhododendron simsii HOM05D000624 ORTHO05D000495 1.9e-33 146.0 99 76.8
HPP92_025607 Vanilla planifolia HOM05D007073 ORTHO05D008855 4.2e-33 144.8 111 66.7
arahy.Tifrunner.gnm1.ann1.0LW32C Arachis hypogaea HOM05D007073 ORTHO05D008855 7.1e-33 144.1 111 70.3
Glyma.05G155900 Glycine max HOM05D007073 ORTHO05D008855 9.3e-33 143.7 107 68.2
MD08G1016500 Malus domestica HOM05D007073 ORTHO05D008855 6.0e-32 141.0 116 61.2
MSTRG.1215 Avicennia marina HOM05D007073 ORTHO05D008855 1.8e-31 139.4 111 63.1
arahy.Tifrunner.gnm1.ann1.F1G2D9 Arachis hypogaea HOM05D007073 ORTHO05D008855 3.9e-31 138.3 134 60.4
CANSAT11G2499 Cannabis sativa HOM05D007073 ORTHO05D008855 5.1e-31 137.9 112 65.2
MD15G1015600 Malus domestica HOM05D007073 ORTHO05D008855 1.1e-30 136.7 113 62.8
C05p30020 Brassica napus HOM05D007073 ORTHO05D008855 1.6e-29 132.9 87 80.5
AUR62014408 Chenopodium quinoa HOM05D007073 ORTHO05D008855 6.2e-29 131.0 89 74.2
Thecc.08G038900 Theobroma cacao HOM05D007073 ORTHO05D008855 1.1e-28 130.2 85 75.3
ATR0945G003 Amborella trichopoda HOM05D007073 ORTHO05D008855 3.1e-28 128.6 118 61.0
Ciclev10002853m.g Citrus clementina HOM05D007073 ORTHO05D008855 3.1e-28 128.6 101 69.3
FAN13G2867 Fragaria x ananassa HOM05D007073 ORTHO05D008855 6.9e-28 127.5 89 71.9
Cfa013916 Carpinus fangiana HOM05D007073 ORTHO05D008855 1.5e-27 126.3 83 75.9
FAN18G2174 Fragaria x ananassa HOM05D007403 ORTHO05D009306 2.0e-27 125.9 85 72.9
Prupe.1G369500 Prunus persica HOM05D007073 ORTHO05D008855 2.0e-27 125.9 107 60.7
Nitab4.5_0005185g0010 Nicotiana tabacum HOM05D007073 ORTHO05D008855 7.6e-27 124.0 79 78.5
Peaxi162Scf01591g00005 Petunia axillaris HOM05D007073 ORTHO05D008855 1.3e-26 123.2 79 77.2
Gohir.D01G101000 Gossypium hirsutum HOM05D007073 ORTHO05D008855 1.7e-26 122.9 83 74.7
Gohir.A01G112900 Gossypium hirsutum HOM05D007073 ORTHO05D008855 3.8e-26 121.7 83 74.7
CiPaw.07G153100 Carya illinoinensis HOM05D007073 ORTHO05D008855 1.4e-25 119.8 85 69.4
MELO3C010995.2 Cucumis melo HOM05D007073 ORTHO05D008855 9.3e-25 117.1 84 69.0
Aqoxy6G02335_Aqoxy6G02336 Aquilegia oxysepala HOM05D000558 ORTHO05D001857 1.2e-24 116.7 81 74.1
Os03g0127000 Oryza sativa ssp. japonica HOM05D007073 ORTHO05D008855 1.2e-24 116.7 79 74.7
Actinidia26593 Actinidia chinensis HOM05D007073 ORTHO05D008855 7.9e-24 114.0 89 70.8
Actinidia37317 Actinidia chinensis HOM05D007073 ORTHO05D008855 1.8e-23 112.8 84 66.7
BcaC05g27114 Brassica carinata HOM05D007073 ORTHO05D008855 1.1e-22 110.2 114 59.6
BolC5t31739H Brassica oleracea HOM05D007073 ORTHO05D008855 2.5e-22 109.0 70 81.4
Eucgr.H01037 Eucalyptus grandis HOM05D007073 ORTHO05D008855 2.5e-22 109.0 79 70.9
SEGI_10735 Sequoiadendron giganteum HOM05D007073 ORTHO05D008855 3.1e-20 102.1 116 51.7
MD13G1087600 Malus domestica HOM05D007073 ORTHO05D008855 1.4e-17 93.2 79 62.0
Mapoly0121s0038 Marchantia polymorpha HOM05D007073 ORTHO05D008855 2.5e-17 92.4 103 53.4
DCAR_017499 Daucus carota HOM05D007073 ORTHO05D008855 3.6e-16 88.6 64 70.3
Pp3c8_14860 Physcomitrium patens HOM05D007073 ORTHO05D008855 8.8e-15 84.0 108 50.0
FAN04G0335 Fragaria x ananassa HOM05D007403 ORTHO05D009306 4.3e-14 81.6 52 78.8
Eucgr.L01259 Eucalyptus grandis HOM05D007073 ORTHO05D008855 4.8e-13 78.2 52 75.0
arahy.Tifrunner.gnm1.ann1.JR36LC Arachis hypogaea HOM05D007073 ORTHO05D008855 6.3e-13 77.8 59 67.8
AagrBONN_evm.TU.Sc2ySwM_344.4448 Anthoceros agrestis HOM05D007073 ORTHO05D008855 6.5e-10 67.8 119 37.8
Actinidia04603 Actinidia chinensis HOM05D007073 ORTHO05D008855 1.9e-09 66.2 60 63.3


User provided reference genes

Program Settings