Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p34530 Brassica napus HOM05D004130 ORTHO05D004705 6.5e-16 86.3 44 100.0
BraA09t38994Z Brassica rapa HOM05D004130 ORTHO05D004705 6.5e-16 86.3 44 100.0
C05p31030 Brassica napus HOM05D004130 ORTHO05D004705 3.2e-15 84.0 42 100.0
BcaC05g27197 Brassica carinata HOM05D004130 ORTHO05D004705 9.4e-15 82.4 42 97.6
BolC5t31827H Brassica oleracea HOM05D004130 ORTHO05D004705 9.4e-15 82.4 42 97.6
BcaB07g32828 Brassica carinata HOM05D004130 ORTHO05D004705 1.2e-14 82.0 42 97.6
A08p10380 Brassica napus HOM05D004130 ORTHO05D004705 6.8e-13 76.3 46 89.1
BraA08t33038Z Brassica rapa HOM05D004130 ORTHO05D004705 6.8e-13 76.3 46 89.1
BcaC05g27958 Brassica carinata HOM05D004130 ORTHO05D004705 8.8e-13 75.9 42 88.1
A05p25500 Brassica napus HOM05D004130 ORTHO05D004705 8.8e-13 75.9 42 88.1
C05p39640 Brassica napus HOM05D004130 ORTHO05D004705 8.8e-13 75.9 42 88.1
BolC5t32704H Brassica oleracea HOM05D004130 ORTHO05D004705 8.8e-13 75.9 42 88.1
BraA05t21434Z Brassica rapa HOM05D004130 ORTHO05D004705 8.8e-13 75.9 42 88.1
BcaB03g13788 Brassica carinata HOM05D004130 ORTHO05D004705 1.5e-12 75.1 42 88.1
Sp1g27510 Schrenkiella parvula HOM05D004130 ORTHO05D004705 1.5e-12 75.1 46 87.0
Carub.0001s3012 Capsella rubella HOM05D004130 ORTHO05D004705 2.0e-12 74.7 42 85.7
Zm00001eb378890 Zea mays HOM05D004130 ORTHO05D004705 2.0e-12 74.7 43 83.7
Aa31LG2G14240 Aethionema arabicum HOM05D004130 ORTHO05D004705 3.4e-12 73.9 44 81.8
BcaC07g37723 Brassica carinata HOM05D004130 ORTHO05D004705 4.4e-12 73.6 46 84.8
BolC8t48106H Brassica oleracea HOM05D004130 ORTHO05D004705 4.4e-12 73.6 46 84.8
Solyc08g075690.3 Solanum lycopersicum HOM05D004130 ORTHO05D004705 7.5e-12 72.8 44 79.5
C05p40370 Brassica napus HOM05D004130 ORTHO05D004705 9.8e-12 72.4 42 83.3
BolC5t32777H Brassica oleracea HOM05D004130 ORTHO05D004705 9.8e-12 72.4 42 83.3
Lsat_1_v5_gn_3_23340 Lactuca sativa HOM05D004130 ORTHO05D004705 1.3e-11 72.0 41 82.9
TPR.G17251 Trifolium pratense HOM05D004130 ORTHO05D004705 1.3e-11 72.0 39 87.2
TWI12G1099 Tripterygium wilfordii HOM05D004130 ORTHO05D004705 1.3e-11 72.0 44 84.1
AL1G45890 Arabidopsis lyrata HOM05D004130 ORTHO05D004705 1.7e-11 71.6 44 79.5
AT1G31812 Arabidopsis thaliana HOM05D004130 ORTHO05D004705 1.7e-11 71.6 46 80.4
CSS0012724 Camellia sinensis var. sinensis HOM05D004130 ORTHO05D004705 1.7e-11 71.6 44 79.5
CSS0014160 Camellia sinensis var. sinensis HOM05D004130 ORTHO05D004705 1.7e-11 71.6 44 79.5
CSS0035325 Camellia sinensis var. sinensis HOM05D004130 ORTHO05D004705 1.7e-11 71.6 44 79.5
CsaV3_3G001010 Cucumis sativus L. HOM05D004130 ORTHO05D004705 1.7e-11 71.6 42 83.3
ECA240G1912 Erigeron canadensis HOM05D000302 ORTHO05D000334 1.7e-11 71.6 39 89.7
Sopen08g024340 Solanum pennellii HOM05D004130 ORTHO05D004705 2.2e-11 71.2 44 77.3
THA.LOC104814400 Tarenaya hassleriana HOM05D004130 ORTHO05D004705 2.2e-11 71.2 44 79.5
CAN.G800.12 Capsicum annuum HOM05D004130 ORTHO05D004705 2.8e-11 70.9 44 77.3
Thhalv10009206m.g Eutrema salsugineum HOM05D004130 ORTHO05D004705 2.8e-11 70.9 43 79.1
FvH4_5g24090 Fragaria vesca HOM05D004130 ORTHO05D004705 2.8e-11 70.9 41 80.5
FAN18G1566 Fragaria x ananassa HOM05D004130 ORTHO05D004705 2.8e-11 70.9 41 80.5
FAN18G3743 Fragaria x ananassa HOM05D004130 ORTHO05D004705 2.8e-11 70.9 41 80.5
Glyma.04G122900 Glycine max HOM05D004130 ORTHO05D004705 2.8e-11 70.9 39 84.6
HanXRQChr17g0537111 Helianthus annuus HOM05D004130 ORTHO05D004705 2.8e-11 70.9 44 79.5
CiPaw.12G072200 Carya illinoinensis HOM05D004130 ORTHO05D004705 3.7e-11 70.5 44 79.5
MELO3C031937.2 Cucumis melo HOM05D004130 ORTHO05D004705 3.7e-11 70.5 42 81.0
ECA246G1091 Erigeron canadensis HOM05D004130 ORTHO05D004705 3.7e-11 70.5 44 77.3
TWI36G0806 Tripterygium wilfordii HOM05D004130 ORTHO05D004705 3.7e-11 70.5 43 81.4
CiPaw.11G103700 Carya illinoinensis HOM05D004130 ORTHO05D004705 4.8e-11 70.1 44 79.5
COL.COLO4_37232 Corchorus olitorius HOM05D004130 ORTHO05D004705 4.8e-11 70.1 44 77.3
Eucgr.E01218 Eucalyptus grandis HOM05D004130 ORTHO05D004705 4.8e-11 70.1 44 77.3
MD00G1002100 Malus domestica HOM05D004130 ORTHO05D004705 4.8e-11 70.1 44 77.3
Sabra03G0070800 Salix brachista HOM05D004130 ORTHO05D004705 4.8e-11 70.1 44 77.3
FAN04G1172 Fragaria x ananassa HOM05D004130 ORTHO05D004705 6.3e-11 69.7 39 82.1
FAN13G0805 Fragaria x ananassa HOM05D004130 ORTHO05D004705 6.3e-11 69.7 39 82.1
PGSC0003DMG400030867 Solanum tuberosum HOM05D004130 ORTHO05D004705 6.3e-11 69.7 44 75.0
ClCG10G000940 Citrullus lanatus HOM05D004130 ORTHO05D004705 8.3e-11 69.3 42 78.6
Gorai.007G349800 Gossypium raimondii HOM05D004130 ORTHO05D004705 8.3e-11 69.3 44 77.3
Medtr5g026740 Medicago truncatula HOM05D004130 ORTHO05D004705 8.3e-11 69.3 39 82.1
Thecc.03G325000 Theobroma cacao HOM05D004130 ORTHO05D004705 8.3e-11 69.3 44 77.3
Actinidia14738 Actinidia chinensis HOM05D004130 ORTHO05D004705 1.1e-10 68.9 44 75.0
CARHR031130 Cardamine hirsuta HOM05D004130 ORTHO05D004705 1.1e-10 68.9 41 82.9
DCAR_030897 Daucus carota HOM05D004130 ORTHO05D004705 1.1e-10 68.9 39 82.1
PSO063G4979 Papaver somniferum HOM05D004130 ORTHO05D004705 1.1e-10 68.9 44 77.3
PSO782G2341 Papaver somniferum HOM05D004130 ORTHO05D004705 1.1e-10 68.9 44 77.3
PGR031G3679 Punica granatum HOM05D004130 ORTHO05D004705 1.1e-10 68.9 44 77.3
PGR067G0004 Punica granatum HOM05D004130 ORTHO05D004705 1.1e-10 68.9 44 77.3
QL12p001893 Quercus lobata HOM05D004130 ORTHO05D004705 1.1e-10 68.9 42 78.6
CANSAT21G0569 Cannabis sativa HOM05D004130 ORTHO05D004705 1.4e-10 68.6 43 76.7
Ca_25095_v3 Cicer arietinum L. HOM05D004130 ORTHO05D004705 1.4e-10 68.6 39 82.1
Ca_30395_v3 Cicer arietinum L. HOM05D004130 ORTHO05D004705 1.4e-10 68.6 39 82.1
Dinv41817 Davidia involucrata HOM05D004130 ORTHO05D004705 1.4e-10 68.6 44 75.0
Duzib106G0486 Durio zibethinus HOM05D004130 ORTHO05D004705 1.4e-10 68.6 43 76.7
Potri.003G103700 Populus trichocarpa HOM05D004130 ORTHO05D004705 1.4e-10 68.6 44 75.0
Dinv37412 Davidia involucrata HOM05D004130 ORTHO05D004705 1.8e-10 68.2 42 78.6
Nn1g02053 Nelumbo nucifera HOM05D004130 ORTHO05D004705 1.8e-10 68.2 44 75.0
Psat0s1441g0080 Pisum sativum HOM05D000032 ORTHO05D004705 1.8e-10 68.2 44 77.3
Psat2g143680 Pisum sativum HOM05D004130 ORTHO05D004705 1.8e-10 68.2 44 77.3
Prupe.5G019500 Prunus persica HOM05D004130 ORTHO05D004705 1.8e-10 68.2 44 72.7
PGR042G1275 Punica granatum HOM05D004130 ORTHO05D004705 1.8e-10 68.2 44 75.0
SalBow8G1427 Salvia bowleyana HOM05D004130 ORTHO05D004705 1.8e-10 68.2 44 72.7
GSVIVG01022804001 Vitis vinifera HOM05D004130 ORTHO05D004705 1.8e-10 68.2 42 73.8
Nn3g19256 Nelumbo nucifera HOM05D004130 ORTHO05D004705 2.4e-10 67.8 44 75.0
THA.LOC104798518 Tarenaya hassleriana HOM05D004130 ORTHO05D004705 2.4e-10 67.8 44 75.0
Cpa.g.c33773 Carica papaya HOM05D004130 ORTHO05D004705 3.1e-10 67.4 44 72.7
Ciclev10002973m.g Citrus clementina HOM05D004130 ORTHO05D004705 3.1e-10 67.4 44 75.0
DCAR_006311 Daucus carota HOM05D004130 ORTHO05D004705 3.1e-10 67.4 39 79.5
Gohir.D11G319700 Gossypium hirsutum HOM05D004130 ORTHO05D004705 3.1e-10 67.4 44 75.0
Manes.17G006800 Manihot esculenta HOM05D004130 ORTHO05D004705 3.1e-10 67.4 45 77.8
Oeu046800.1 Olea europaea HOM05D004130 ORTHO05D004705 3.1e-10 67.4 41 78.0
Peaxi162Scf00193g00214 Petunia axillaris HOM05D004130 ORTHO05D004705 3.1e-10 67.4 44 77.3
Sabra01G0100700 Salix brachista HOM05D004130 ORTHO05D004705 3.1e-10 67.4 44 72.7
ATR0829G178 Amborella trichopoda HOM05D004130 ORTHO05D004705 4.1e-10 67.0 44 75.0
Aqoxy7G01323 Aquilegia oxysepala HOM05D004130 ORTHO05D004705 4.1e-10 67.0 44 72.7
Glyma.09G214500 Glycine max HOM05D004130 ORTHO05D004705 4.1e-10 67.0 39 79.5
Manes.15G182400 Manihot esculenta HOM05D004130 ORTHO05D004705 4.1e-10 67.0 45 77.8
Os06g0115300 Oryza sativa ssp. japonica HOM05D004130 ORTHO05D004705 4.1e-10 67.0 43 72.1
RcHm_v2.0_Chr7g0213621 Rosa chinensis HOM05D004130 ORTHO05D004705 4.1e-10 67.0 44 72.7
Gohir.D11G319800 Gossypium hirsutum HOM05D004130 ORTHO05D004705 5.4e-10 66.6 42 76.2
Gorai.007G349900 Gossypium raimondii HOM05D004130 ORTHO05D004705 5.4e-10 66.6 42 76.2
Nitab4.5_0001023g0180 Nicotiana tabacum HOM05D004130 ORTHO05D004705 5.4e-10 66.6 42 73.8
Potri.001G130200 Populus trichocarpa HOM05D004130 ORTHO05D004705 5.4e-10 66.6 44 72.7
Rhsim11G0034100 Rhododendron simsii HOM05D004130 ORTHO05D004705 5.4e-10 66.6 41 75.6
Sed0010064 Sechium edule HOM05D004130 ORTHO05D004705 5.4e-10 66.6 42 73.8
Hma1.2p1_1873F.1_g306170 Hydrangea macrophylla HOM05D004130 ORTHO05D004705 7.0e-10 66.2 42 73.8
TAR636G0177 Trochodendron aralioides HOM05D004130 ORTHO05D004705 7.0e-10 66.2 41 78.0
Dinv25573 Davidia involucrata HOM05D004130 ORTHO05D004705 9.1e-10 65.9 41 78.0
Zm00001eb415460 Zea mays HOM05D004130 ORTHO05D004705 9.1e-10 65.9 42 76.2
Actinidia01260 Actinidia chinensis HOM05D004130 ORTHO05D004705 1.2e-09 65.5 44 72.7
Migut.E01354 Erythranthe guttata HOM05D004130 ORTHO05D004705 1.2e-09 65.5 41 73.2
Gohir.A11G304400 Gossypium hirsutum HOM05D004130 ORTHO05D004705 1.2e-09 65.5 42 73.8
TAR374G0121 Trochodendron aralioides HOM05D004130 ORTHO05D004705 1.2e-09 65.5 44 70.5
Actinidia32778 Actinidia chinensis HOM05D004130 ORTHO05D004705 1.6e-09 65.1 44 70.5
Nitab4.5_0000030g0220 Nicotiana tabacum HOM05D004130 ORTHO05D004705 1.6e-09 65.1 42 71.4
Os08g0162800 Oryza sativa ssp. japonica HOM05D004130 ORTHO05D004705 1.6e-09 65.1 42 71.4
Phvul.002G127700 Phaseolus vulgaris HOM05D004130 ORTHO05D004705 1.6e-09 65.1 39 76.9
SGA_v2.0_scaffold144G35883 Striga asiatica HOM05D003598 ORTHO05D004198 1.6e-09 65.1 42 73.8
TAR375G1053 Trochodendron aralioides HOM05D004130 ORTHO05D004705 1.6e-09 65.1 43 69.8
arahy.Tifrunner.gnm1.ann1.DIJ3RT Arachis hypogaea HOM05D004130 ORTHO05D004705 2.0e-09 64.7 39 74.4
arahy.Tifrunner.gnm1.ann1.X5SRIL Arachis hypogaea HOM05D004130 ORTHO05D004705 2.0e-09 64.7 39 74.4
vmacro00053 Vaccinium macrocarpon HOM05D004130 ORTHO05D004705 2.0e-09 64.7 39 76.9
Lalb_Chr16g0380701 Lupinus albus HOM05D004130 ORTHO05D004705 2.7e-09 64.3 39 74.4
Aqoxy4G02079 Aquilegia oxysepala HOM05D004130 ORTHO05D004705 3.5e-09 63.9 44 68.2
CDE02G3877 Ceratophyllum demersum HOM05D004130 ORTHO05D004705 3.5e-09 63.9 42 69.0
CDE11G1231 Ceratophyllum demersum HOM05D004130 ORTHO05D004705 3.5e-09 63.9 42 69.0
Os03g0576600 Oryza sativa ssp. japonica HOM05D004130 ORTHO05D004705 3.5e-09 63.9 41 73.2
Atru.chr6.2108 Acer truncatum HOM05D004130 ORTHO05D004705 4.5e-09 63.5 44 70.5
unitig_32.g11633 Utricularia gibba HOM05D004130 ORTHO05D004705 7.7e-09 62.8 44 68.2
GSVIVG01015105001 Vitis vinifera HOM05D004130 ORTHO05D004705 7.7e-09 62.8 41 73.2
MBI04_g27275_MAGBIO Magnolia biondii HOM05D004130 ORTHO05D004705 1.0e-08 62.4 42 71.4
Lalb_Chr05g0215391 Lupinus albus HOM05D004130 ORTHO05D004705 1.7e-08 61.6 39 71.8
MD06G1017000 Malus domestica HOM05D004130 ORTHO05D004705 1.7e-08 61.6 44 68.2
Lj2g0015830 Lotus japonicus HOM05D004130 ORTHO05D004705 2.2e-08 61.2 39 71.8
EL10Ac5g11913 Beta vulgaris HOM05D004130 ORTHO05D004705 2.9e-08 60.8 44 68.2
Aqoxy4G01989 Aquilegia oxysepala HOM05D004130 ORTHO05D004705 5.0e-08 60.1 44 65.9
Eucgr.C00828 Eucalyptus grandis HOM05D004130 ORTHO05D004705 6.5e-08 59.7 36 77.8
Sc01g0007080 Simmondsia chinensis HOM05D004130 ORTHO05D004705 6.5e-08 59.7 39 71.8
BolC5t32707H Brassica oleracea HOM05D004130 ORTHO05D004705 8.5e-08 59.3 38 81.6
MSTRG.11879 Avicennia marina HOM05D004130 ORTHO05D004705 1.1e-07 58.9 42 64.3
MD15G1215200 Malus domestica HOM05D004130 ORTHO05D004705 1.5e-07 58.5 43 67.4
Hund11098 Selenicereus undatus HOM05D004130 ORTHO05D004705 1.5e-07 58.5 39 69.2
AUR62027316 Chenopodium quinoa HOM05D004130 ORTHO05D004705 1.9e-07 58.2 39 66.7
Cc00_g07460 Coffea canephora HOM05D004130 ORTHO05D004705 1.9e-07 58.2 39 69.2
COL.COLO4_18121 Corchorus olitorius HOM05D004130 ORTHO05D004705 5.5e-07 56.6 39 69.2
MD02G1087600 Malus domestica HOM05D004130 ORTHO05D004705 5.5e-07 56.6 43 67.4
Ah.12g056050 Amaranthus hybridus HOM05D004130 ORTHO05D004705 7.2e-07 56.2 39 66.7
Atru.chr7.1674 Acer truncatum HOM05D004130 ORTHO05D004705 9.4e-07 55.8 35 71.4
AUR62007416 Chenopodium quinoa HOM05D004130 ORTHO05D004705 9.4e-07 55.8 39 64.1
FvH4_1g08340 Fragaria vesca HOM05D004130 ORTHO05D004705 9.4e-07 55.8 38 68.4
FAN19G1377 Fragaria x ananassa HOM05D004130 ORTHO05D004705 9.4e-07 55.8 38 68.4
FAN28G0738 Fragaria x ananassa HOM05D004130 ORTHO05D004705 9.4e-07 55.8 38 68.4
Prupe.7G202100 Prunus persica HOM05D004130 ORTHO05D004705 1.2e-06 55.5 42 61.9
Thecc.09G080000 Theobroma cacao HOM05D004130 ORTHO05D004705 1.2e-06 55.5 41 63.4
Mapoly0146s0043 Marchantia polymorpha HOM05D004130 ORTHO05D004705 1.6e-06 55.1 38 68.4
SMO340G0182 Selaginella moellendorffii HOM05D004130 ORTHO05D004705 2.1e-06 54.7 38 65.8
FAN23G0613 Fragaria x ananassa HOM05D004130 ORTHO05D004705 2.7e-06 54.3 38 65.8
Rhsim11G0034000 Rhododendron simsii HOM05D004130 ORTHO05D004705 8.0e-06 52.8 33 72.7


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