Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p34000 Brassica napus HOM05D004519 ORTHO05D006283 3.0e-254 881.3 444 100.0
BraA09t38946Z Brassica rapa HOM05D004519 ORTHO05D006283 1.9e-235 818.9 444 94.1
C05p31600 Brassica napus HOM05D004519 ORTHO05D006283 1.5e-224 782.7 395 98.0
BolC5t31883H Brassica oleracea HOM05D004519 ORTHO05D006283 1.5e-224 782.7 395 98.0
BcaB07g32892 Brassica carinata HOM05D004519 ORTHO05D006283 6.2e-223 777.3 450 89.3
Sp1g27880 Schrenkiella parvula HOM05D004519 ORTHO05D006283 1.1e-222 776.5 471 85.6
BcaC05g27251 Brassica carinata HOM05D004519 ORTHO05D006283 1.4e-222 776.2 395 97.2
Thhalv10007540m.g Eutrema salsugineum HOM05D004519 ORTHO05D006283 1.7e-220 769.2 472 85.0
BcaB03g13753 Brassica carinata HOM05D004519 ORTHO05D006283 2.1e-218 762.3 457 85.8
BcaC07g37628 Brassica carinata HOM05D004519 ORTHO05D006283 5.1e-217 757.7 451 85.8
BcaC05g27905 Brassica carinata HOM05D004519 ORTHO05D006283 1.9e-216 755.7 459 85.6
A08p09320 Brassica napus HOM05D004519 ORTHO05D006283 5.6e-216 754.2 451 85.6
BraA08t32930Z Brassica rapa HOM05D004519 ORTHO05D006283 5.6e-216 754.2 451 85.6
BolC8t47999H Brassica oleracea HOM05D004519 ORTHO05D006283 2.1e-215 752.3 451 84.7
BcaB04g17996 Brassica carinata HOM05D004519 ORTHO05D006283 9.9e-213 743.4 450 85.1
A05p25130 Brassica napus HOM05D004519 ORTHO05D006283 2.7e-210 735.3 448 84.4
BraA05t21393Z Brassica rapa HOM05D004519 ORTHO05D006283 2.7e-210 735.3 448 84.4
CARHR031570 Cardamine hirsuta HOM05D004519 ORTHO05D006283 1.3e-209 733.0 468 81.6
AL1G46330 Arabidopsis lyrata HOM05D004519 ORTHO05D006283 1.8e-209 732.6 460 82.2
AT1G32200 Arabidopsis thaliana HOM05D004519 ORTHO05D006283 2.1e-207 725.7 460 81.3
Carub.0001s3053 Capsella rubella HOM05D004519 ORTHO05D006283 1.2e-205 719.9 460 80.7
Aa31LG2G13810 Aethionema arabicum HOM05D004519 ORTHO05D006283 6.7e-201 704.1 478 76.6
C05p39140 Brassica napus HOM05D004519 ORTHO05D006283 6.0e-194 681.0 420 84.3
THA.LOC104812759 Tarenaya hassleriana HOM05D004519 ORTHO05D006283 2.9e-180 635.6 435 73.6
THA.LOC104814413 Tarenaya hassleriana HOM05D004519 ORTHO05D006283 8.5e-180 634.0 455 70.3
Manes.17G018849 Manihot esculenta HOM05D004519 ORTHO05D006283 1.0e-164 583.9 424 65.6
PSO063G4347 Papaver somniferum HOM05D004519 ORTHO05D006283 5.0e-164 581.6 448 63.8
PGR042G1943 Punica granatum HOM05D004519 ORTHO05D006283 1.1e-163 580.5 443 64.3
Ciclev10001047m.g Citrus clementina HOM05D004519 ORTHO05D006283 2.5e-163 579.3 402 67.7
GSVIVG01013060001 Vitis vinifera HOM05D004519 ORTHO05D006283 2.5e-163 579.3 440 65.9
PSO782G3212 Papaver somniferum HOM05D004519 ORTHO05D006283 3.2e-163 578.9 448 63.8
MD06G1026700 Malus domestica HOM05D004519 ORTHO05D006283 8.0e-162 574.3 445 63.8
CSS0024637 Camellia sinensis var. sinensis HOM05D004519 ORTHO05D006283 1.4e-161 573.5 445 63.6
Gorai.007G033500 Gossypium raimondii HOM05D004519 ORTHO05D006283 4.0e-161 572.0 446 64.8
MD16G1279400 Malus domestica HOM05D004519 ORTHO05D006283 4.0e-161 572.0 442 64.0
RcHm_v2.0_Chr7g0211781 Rosa chinensis HOM05D004519 ORTHO05D006283 7.5e-160 567.8 398 67.6
Gorai.004G182200 Gossypium raimondii HOM05D004519 ORTHO05D006283 1.3e-159 567.0 446 63.9
Gohir.A11G028600 Gossypium hirsutum HOM05D004519 ORTHO05D006283 1.7e-159 566.6 395 69.6
Cfa012505 Carpinus fangiana HOM05D004519 ORTHO05D006283 8.3e-159 564.3 401 67.6
Potri.001G136600 Populus trichocarpa HOM05D004519 ORTHO05D006283 1.4e-158 563.5 401 67.3
Dinv25262 Davidia involucrata HOM05D004519 ORTHO05D006283 1.8e-158 563.1 395 68.1
FAN04G1490 Fragaria x ananassa HOM05D004519 ORTHO05D006283 1.8e-158 563.1 399 66.7
FvH4_5g23060 Fragaria vesca HOM05D004519 ORTHO05D006283 3.1e-158 562.4 399 66.2
FAN18G3814 Fragaria x ananassa HOM05D004519 ORTHO05D006283 3.1e-158 562.4 399 66.2
CiPaw.11G098500 Carya illinoinensis HOM05D004519 ORTHO05D006283 9.1e-158 560.8 444 63.5
Aqoxy3G02176 Aquilegia oxysepala HOM05D004519 ORTHO05D006283 1.6e-157 560.1 401 65.6
CsaV3_3G048840 Cucumis sativus L. HOM05D004519 ORTHO05D006283 1.6e-157 560.1 395 68.4
Dinv29004 Davidia involucrata HOM05D004519 ORTHO05D006283 2.7e-157 559.3 405 67.2
Gohir.D11G030600 Gossypium hirsutum HOM05D004519 ORTHO05D006283 2.7e-157 559.3 395 69.1
Lalb_Chr09g0325481 Lupinus albus HOM05D004519 ORTHO05D006283 5.9e-157 558.1 405 66.4
Nn1g00218 Nelumbo nucifera HOM05D004519 ORTHO05D006283 2.9e-156 555.8 449 60.1
Gohir.A03G000032 Gossypium hirsutum HOM05D004519 ORTHO05D006283 6.5e-156 554.7 402 66.7
FAN18G1908 Fragaria x ananassa HOM05D004519 ORTHO05D006283 1.1e-155 553.9 415 63.9
MELO3C003440.2 Cucumis melo HOM05D004519 ORTHO05D006283 1.5e-155 553.5 393 68.4
Lj4g0001331 Lotus japonicus HOM05D004519 ORTHO05D006283 1.5e-155 553.5 391 68.0
Hma1.2p1_1569F.1_g291200 Hydrangea macrophylla HOM05D004519 ORTHO05D006283 1.9e-155 553.1 402 65.7
FAN13G3061 Fragaria x ananassa HOM05D004519 ORTHO05D006283 2.5e-155 552.7 400 65.2
Oeu027094.2 Olea europaea HOM05D004519 ORTHO05D006283 3.2e-155 552.4 403 65.5
HanXRQChr03g0083251 Helianthus annuus HOM05D004519 ORTHO05D006283 1.2e-154 550.4 441 62.6
Lalb_Chr16g0381061 Lupinus albus HOM05D004519 ORTHO05D006283 2.1e-154 549.7 366 69.4
Sc01g0007150 Simmondsia chinensis HOM05D004519 ORTHO05D006283 2.7e-154 549.3 423 65.0
Gorai.003G185500 Gossypium raimondii HOM05D004519 ORTHO05D006283 3.6e-154 548.9 402 66.2
Eucgr.E00228 Eucalyptus grandis HOM05D004519 ORTHO05D006283 4.7e-154 548.5 398 65.6
Lsat_1_v5_gn_6_80100 Lactuca sativa HOM05D004519 ORTHO05D006283 6.1e-154 548.1 429 62.7
Nn3g19385 Nelumbo nucifera HOM05D004519 ORTHO05D006283 6.1e-154 548.1 405 65.4
CiPaw.12G068400 Carya illinoinensis HOM05D004519 ORTHO05D006283 2.3e-153 546.2 394 67.0
MBI04_g32203_MAGBIO Magnolia biondii HOM05D004519 ORTHO05D006283 4.0e-153 545.4 434 61.1
TAR629G2035 Trochodendron aralioides HOM05D004519 ORTHO05D006283 5.2e-153 545.0 425 63.3
Duzib205G0301 Durio zibethinus HOM05D004519 ORTHO05D006283 6.8e-153 544.7 396 66.2
Medtr5g029230 Medicago truncatula HOM05D004519 ORTHO05D006283 8.8e-153 544.3 366 69.4
Sed0022223 Sechium edule HOM05D004519 ORTHO05D006283 8.8e-153 544.3 434 62.2
TPR.G19434 Trifolium pratense HOM05D004519 ORTHO05D006283 1.5e-152 543.5 390 66.4
Sabra01G0105700 Salix brachista HOM05D004519 ORTHO05D006283 9.8e-152 540.8 467 59.1
Ca_25177_v3 Cicer arietinum L. HOM05D004519 ORTHO05D006283 1.4e-150 537.0 369 69.1
Nitab4.5_0000529g0120 Nicotiana tabacum HOM05D004519 ORTHO05D006283 2.4e-150 536.2 442 60.4
Glyma.01G014200 Glycine max HOM05D004519 ORTHO05D006283 4.1e-150 535.4 366 68.3
Glyma.09G207900 Glycine max HOM05D004519 ORTHO05D006283 7.0e-150 534.6 366 68.0
HanXRQChr13g0414231 Helianthus annuus HOM05D004519 ORTHO05D006283 7.0e-150 534.6 392 66.3
Psat2g139000 Pisum sativum HOM05D004519 ORTHO05D006283 7.0e-150 534.6 434 60.6
CAN.G726.25 Capsicum annuum HOM05D004519 ORTHO05D006283 9.1e-150 534.3 443 59.1
Cc08_g03490 Coffea canephora HOM05D004519 ORTHO05D006283 3.5e-149 532.3 371 69.0
ECA240G3299 Erigeron canadensis HOM05D004519 ORTHO05D006283 4.5e-149 531.9 422 62.3
VMungo1215G0394 Vigna mungo HOM05D004519 ORTHO05D006283 5.9e-149 531.6 391 65.0
Solyc08g076470.4 Solanum lycopersicum HOM05D004519 ORTHO05D006283 2.3e-148 529.6 446 59.0
Sopen08g025050 Solanum pennellii HOM05D004519 ORTHO05D006283 2.9e-148 529.3 446 59.0
Phvul.002G136600 Phaseolus vulgaris HOM05D004519 ORTHO05D006283 8.6e-148 527.7 406 62.8
Os10g0577900 Oryza sativa ssp. japonica HOM05D004519 ORTHO05D006283 4.2e-147 525.4 444 59.2
Migut.E00743 Erythranthe guttata HOM05D004519 ORTHO05D006283 9.5e-147 524.2 408 61.0
CANSAT01G0127 Cannabis sativa HOM05D004519 ORTHO05D006283 3.6e-146 522.3 367 67.8
SGA_v2.0_scaffold198G41070 Striga asiatica HOM05D004519 ORTHO05D006283 4.7e-146 521.9 465 56.3
MSTRG.24848 Avicennia marina HOM05D004519 ORTHO05D006283 6.1e-146 521.5 432 59.3
ClCG09G011630 Citrullus lanatus HOM05D004519 ORTHO05D006283 6.1e-146 521.5 465 58.5
Prupe.5G027200 Prunus persica HOM05D004519 ORTHO05D006283 5.2e-145 518.5 423 60.8
Zm00001eb224960 Zea mays HOM05D004519 ORTHO05D006283 2.2e-143 513.1 357 65.5
ATR0829G164 Amborella trichopoda HOM05D004519 ORTHO05D006283 3.7e-143 512.3 409 61.4
Rhsim11G0021900 Rhododendron simsii HOM05D004519 ORTHO05D006283 2.7e-141 506.1 558 50.0
Zm00001eb025080 Zea mays HOM05D004519 ORTHO05D006283 1.0e-140 504.2 357 65.0
AUR62007353 Chenopodium quinoa HOM05D004519 ORTHO05D006283 7.3e-139 498.0 419 59.9
CSS0001538 Camellia sinensis var. sinensis HOM05D004519 ORTHO05D006283 2.8e-138 496.1 333 69.7
AUR62018641 Chenopodium quinoa HOM05D004519 ORTHO05D006283 3.6e-138 495.7 352 67.0
Duzib068G1409 Durio zibethinus HOM05D004519 ORTHO05D006283 1.0e-137 494.2 435 59.5
SEGI_02196 Sequoiadendron giganteum HOM05D004519 ORTHO05D006283 4.0e-137 492.3 402 60.7
QL12p001672 Quercus lobata HOM05D004519 ORTHO05D006283 1.2e-136 490.7 488 52.5
Thecc.03G310400 Theobroma cacao HOM05D004519 ORTHO05D006283 1.2e-136 490.7 464 56.2
DCAR_008221 Daucus carota HOM05D004519 ORTHO05D006283 3.7e-135 485.7 373 64.3
arahy.Tifrunner.gnm1.ann1.BI8WMI Arachis hypogaea HOM05D004519 ORTHO05D006283 4.9e-135 485.3 344 66.0
arahy.Tifrunner.gnm1.ann1.D9NVDI Arachis hypogaea HOM05D004519 ORTHO05D006283 4.9e-135 485.3 344 66.0
Gohir.D03G176300 Gossypium hirsutum HOM05D004519 ORTHO05D006283 6.4e-135 485.0 333 69.1
CDE12G0245 Ceratophyllum demersum HOM05D004519 ORTHO05D006283 1.1e-134 484.2 444 55.9
vmacro00276 Vaccinium macrocarpon HOM05D004519 ORTHO05D006283 2.4e-134 483.0 329 69.0
unitig_32.g10899 Utricularia gibba HOM05D004519 ORTHO05D006283 4.1e-134 482.3 393 59.0
Lj2A231G41 Lonicera japonica HOM05D004519 ORTHO05D006283 3.5e-133 479.2 467 54.6
Gohir.D08G174500 Gossypium hirsutum HOM05D004519 ORTHO05D006283 3.6e-130 469.2 378 62.4
Gohir.A08G153600 Gossypium hirsutum HOM05D004519 ORTHO05D006283 5.2e-129 465.3 378 62.2
Mapoly0045s0098 Marchantia polymorpha HOM05D004519 ORTHO05D006283 4.1e-126 455.7 389 53.7
CDE04G2515 Ceratophyllum demersum HOM05D004519 ORTHO05D006283 1.0e-124 451.1 426 53.5
FAN08G3243 Fragaria x ananassa HOM05D004519 ORTHO05D006283 1.0e-124 451.1 409 56.2
Haze_08164 Corylus avellana HOM05D004519 ORTHO05D006283 5.6e-123 445.3 416 56.0
SMO244G0022 Selaginella moellendorffii HOM05D004519 ORTHO05D006283 7.3e-123 444.9 353 58.6
Peaxi162Scf00170g00818 Petunia axillaris HOM05D004519 ORTHO05D006283 4.7e-122 442.2 404 54.7
Nitab4.5_0012493g0010 Nicotiana tabacum HOM05D004519 ORTHO05D006283 5.2e-121 438.7 297 67.7
EL10Ac5g12013 Beta vulgaris HOM05D004519 ORTHO05D006283 8.3e-119 431.4 400 54.0
HPP92_020895 Vanilla planifolia HOM05D004519 ORTHO05D006283 8.6e-116 421.4 293 66.6
Pp3c7_2970 Physcomitrium patens HOM05D004519 ORTHO05D006283 7.3e-115 418.3 398 48.5
HanXRQChr06g0172791 Helianthus annuus HOM05D004519 ORTHO05D006283 2.8e-114 416.4 353 58.4
AagrBONN_evm.TU.Sc2ySwM_117.1032 Anthoceros agrestis HOM05D004547 ORTHO05D005133 5.8e-112 408.7 405 50.4
EL10Ac5g12011 Beta vulgaris HOM05D004519 ORTHO05D006283 2.7e-109 399.8 386 52.6
CBR_g4494 Chara braunii HOM05D004519 ORTHO05D006283 6.6e-108 395.2 392 49.7
DCAR_004271 Daucus carota HOM05D004519 ORTHO05D006283 1.1e-107 394.4 248 73.0
Actinidia01317 Actinidia chinensis HOM05D004519 ORTHO05D006283 1.4e-105 387.5 312 64.1
Cpa.g.sc208.3 Carica papaya HOM05D004519 ORTHO05D006283 2.3e-100 370.2 217 77.9
Haze_08160 Corylus avellana HOM05D004519 ORTHO05D006283 1.8e-97 360.5 255 68.6
Eucgr.E01634 Eucalyptus grandis HOM05D004519 ORTHO05D006283 1.2e-96 357.8 249 67.9
Atru.chr6.1525 Acer truncatum HOM05D004519 ORTHO05D006283 3.2e-86 323.2 206 73.3
Cre02.g143000 Chlamydomonas reinhardtii HOM05D004519 ORTHO05D006283 8.7e-76 288.5 388 38.9
MCO03G317 Micromonas commoda HOM05D004519 ORTHO05D006283 1.1e-67 261.5 338 41.7
PRCOL_00006772 Prasinoderma coloniale HOM05D004519 ORTHO05D006283 2.4e-65 253.8 310 41.9
Actinidia29340 Actinidia chinensis HOM05D004519 ORTHO05D006283 7.9e-61 238.8 177 66.1
Hma1.2p1_3246F.1_g334370 Hydrangea macrophylla HOM05D004519 ORTHO05D006283 1.2e-45 188.3 176 53.4
Cpa.g.sc208.5 Carica papaya HOM05D004519 ORTHO05D006283 2.0e-40 171.0 208 50.5
MBI15_g25773_MAGBIO Magnolia biondii HOM05D004519 ORTHO05D006283 2.4e-33 147.5 98 67.3
Eucgr.A01818 Eucalyptus grandis HOM05D004519 ORTHO05D006283 3.3e-30 137.1 85 72.9
HanXRQChr16g0500211 Helianthus annuus HOM05D004519 ORTHO05D006283 2.5e-22 110.9 77 70.1
Haze_20066 Corylus avellana HOM05D004519 ORTHO05D007437 1.2e-19 102.1 95 51.6
COL.COLO4_16939 Corchorus olitorius HOM05D004519 ORTHO05D006283 7.5e-19 99.4 74 68.9
Actinidia01316 Actinidia chinensis HOM05D004519 ORTHO05D006283 1.1e-17 95.5 68 61.8
arahy.Tifrunner.gnm1.ann1.LG4SFI Arachis hypogaea HOM05D000755 ORTHO05D017477 2.4e-17 94.4 108 46.3
PGSC0003DMG401014796 Solanum tuberosum HOM05D004519 ORTHO05D006283 1.7e-15 88.2 92 44.6
Gohir.D08G117301 Gossypium hirsutum HOM05D004519 ORTHO05D017048 3.3e-14 84.0 55 67.3
Gohir.D11G228750 Gossypium hirsutum HOM05D004519 ORTHO05D017048 3.3e-14 84.0 55 67.3
Gohir.D11G251850 Gossypium hirsutum HOM05D004519 ORTHO05D017048 3.3e-14 84.0 55 67.3
Gohir.D13G135501 Gossypium hirsutum HOM05D004519 ORTHO05D017048 9.5e-14 82.4 55 65.5
Gorai.008G116000 Gossypium raimondii HOM05D004519 ORTHO05D017048 2.8e-13 80.9 54 66.7
RcHm_v2.0_Chr5g0062811 Rosa chinensis HOM05D004519 ORTHO05D017048 1.1e-12 79.0 54 61.1
Actinidia29341 Actinidia chinensis HOM05D004519 ORTHO05D052920 1.1e-06 58.9 32 75.0
arahy.Tifrunner.gnm1.ann1.18EICQ Arachis hypogaea HOM05D000755 ORTHO05D017477 5.6e-06 56.6 53 54.7


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