Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p33790 Brassica napus HOM05D006869 ORTHO05D008641 2.4e-58 228.8 129 100.0
BraA09t38929Z Brassica rapa HOM05D006869 ORTHO05D008641 2.4e-58 228.8 129 100.0
BcaC05g27275 Brassica carinata HOM05D006869 ORTHO05D008641 5.3e-58 227.6 129 99.2
BolC5t31911H Brassica oleracea HOM05D006869 ORTHO05D008641 5.3e-58 227.6 129 99.2
BcaB07g32921 Brassica carinata HOM05D006869 ORTHO05D008641 7.7e-57 223.8 129 96.9
C05p31830 Brassica napus HOM05D006869 ORTHO05D008641 1.1e-52 209.9 119 99.2
Thhalv10009100m.g Eutrema salsugineum HOM05D006869 ORTHO05D008641 3.5e-49 198.4 132 87.9
Sp1g28510 Schrenkiella parvula HOM05D006869 ORTHO05D008641 4.5e-49 198.0 132 87.9
AT1G32370 Arabidopsis thaliana HOM05D006869 ORTHO05D008641 1.7e-48 196.1 124 89.5
Carub.0001s3075 Capsella rubella HOM05D006869 ORTHO05D008641 1.9e-47 192.6 128 85.9
CARHR031750 Cardamine hirsuta HOM05D006869 ORTHO05D008641 1.2e-46 189.9 122 87.7
AL1G46570 Arabidopsis lyrata HOM05D006869 ORTHO05D008641 6.1e-46 187.6 121 87.6
Aa31LG2G13630 Aethionema arabicum HOM05D006869 ORTHO05D008641 1.7e-43 179.5 129 81.4
THA.LOC104798593 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 1.2e-41 173.3 121 81.0
THA.LOC104798477 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 1.0e-40 170.2 129 77.5
THA.LOC104822843 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 2.5e-31 139.0 123 67.5
MELO3C003378.2 Cucumis melo HOM05D006869 ORTHO05D008641 4.4e-28 128.3 113 68.1
Cpa.g.sc6.427 Carica papaya HOM05D006869 ORTHO05D008641 7.5e-28 127.5 132 66.7
Ciclev10033051m.g Citrus clementina HOM05D006869 ORTHO05D008641 9.8e-28 127.1 114 64.0
Prupe.5G042800 Prunus persica HOM05D006869 ORTHO05D008641 9.8e-28 127.1 116 64.7
Potri.001G145500 Populus trichocarpa HOM05D006869 ORTHO05D008641 2.2e-27 125.9 115 65.2
Atru.chr6.1763 Acer truncatum HOM05D006869 ORTHO05D008641 2.8e-27 125.6 130 59.2
BcaC05g27873 Brassica carinata HOM05D006869 ORTHO05D008641 3.7e-27 125.2 114 73.7
C05p38760 Brassica napus HOM05D006869 ORTHO05D008641 3.7e-27 125.2 114 73.7
TWI15G0987 Tripterygium wilfordii HOM05D006869 ORTHO05D008641 3.7e-27 125.2 112 66.1
CiPaw.12G061200 Carya illinoinensis HOM05D006869 ORTHO05D008641 4.9e-27 124.8 116 63.8
CsaV3_1G016990 Cucumis sativus L. HOM05D006869 ORTHO05D008641 4.9e-27 124.8 101 70.3
CsaV3_3G049460 Cucumis sativus L. HOM05D006869 ORTHO05D008641 4.9e-27 124.8 101 70.3
MD06G1029000 Malus domestica HOM05D006869 ORTHO05D008641 6.3e-27 124.4 115 62.6
CiPaw.11G089700 Carya illinoinensis HOM05D006869 ORTHO05D008641 8.3e-27 124.0 116 62.1
Manes.15G174500 Manihot esculenta HOM05D006869 ORTHO05D008641 1.1e-26 123.6 111 65.8
COL.COLO4_17099 Corchorus olitorius HOM05D006869 ORTHO05D008641 1.8e-26 122.9 121 62.8
Ca_03396_v3 Cicer arietinum L. HOM05D006869 ORTHO05D008641 2.4e-26 122.5 118 61.9
Duzib205G1446 Durio zibethinus HOM05D006869 ORTHO05D008641 4.1e-26 121.7 110 65.5
Lj3g0015338 Lotus japonicus HOM05D006869 ORTHO05D008641 4.1e-26 121.7 128 61.7
CSS0028384 Camellia sinensis var. sinensis HOM05D006869 ORTHO05D008641 7.0e-26 120.9 103 68.0
CSS0030709 Camellia sinensis var. sinensis HOM05D006869 ORTHO05D008641 7.0e-26 120.9 103 68.0
Medtr2g071640 Medicago truncatula HOM05D006869 ORTHO05D008641 7.0e-26 120.9 113 61.9
Phvul.005G061500 Phaseolus vulgaris HOM05D006869 ORTHO05D008641 7.0e-26 120.9 111 64.9
Glyma.13G259900 Glycine max HOM05D006869 ORTHO05D008641 5.9e-25 117.9 97 71.1
Thecc.03G232900 Theobroma cacao HOM05D006869 ORTHO05D008641 7.8e-25 117.5 110 64.5
ClCG09G012310 Citrullus lanatus HOM05D006869 ORTHO05D008641 1.0e-24 117.1 133 57.1
Migut.D00490 Erythranthe guttata HOM05D006869 ORTHO05D008641 1.0e-24 117.1 110 62.7
Gohir.A09G198300 Gossypium hirsutum HOM05D006869 ORTHO05D008641 1.7e-24 116.3 122 59.8
PGR042G2539 Punica granatum HOM05D006869 ORTHO05D008641 1.7e-24 116.3 115 60.9
GSVIVG01013242001 Vitis vinifera HOM05D006869 ORTHO05D008641 1.7e-24 116.3 97 68.0
Aqoxy3G02480 Aquilegia oxysepala HOM05D006869 ORTHO05D008641 2.3e-24 115.9 99 66.7
RcHm_v2.0_Chr7g0208861 Rosa chinensis HOM05D006869 ORTHO05D008641 2.3e-24 115.9 117 59.8
Sc22g0001440 Simmondsia chinensis HOM05D006869 ORTHO05D008641 2.9e-24 115.5 103 66.0
TAR375G0341 Trochodendron aralioides HOM05D006869 ORTHO05D008641 3.8e-24 115.2 118 61.9
VMungo1080G1596 Vigna mungo HOM05D006869 ORTHO05D008641 3.8e-24 115.2 105 63.8
TPR.G26622 Trifolium pratense HOM05D006869 ORTHO05D008641 5.0e-24 114.8 115 60.9
arahy.Tifrunner.gnm1.ann1.U4TMK5 Arachis hypogaea HOM05D006869 ORTHO05D008641 8.6e-24 114.0 126 56.3
FvH4_5g21430 Fragaria vesca HOM05D006869 ORTHO05D008641 8.6e-24 114.0 109 61.5
Gohir.D09G192900 Gossypium hirsutum HOM05D006869 ORTHO05D008641 1.5e-23 113.2 122 59.0
Nn1g00590 Nelumbo nucifera HOM05D006869 ORTHO05D008641 3.3e-23 112.1 125 58.4
CANSAT21G0218 Cannabis sativa HOM05D006869 ORTHO05D008641 4.3e-23 111.7 102 60.8
MSTRG.17527 Avicennia marina HOM05D006869 ORTHO05D008641 7.3e-23 110.9 126 53.2
PSO675G8621 Papaver somniferum HOM05D006869 ORTHO05D008641 7.3e-23 110.9 105 64.8
arahy.Tifrunner.gnm1.ann1.TLF144 Arachis hypogaea HOM05D006869 ORTHO05D008641 9.5e-23 110.5 130 53.8
Actinidia09229 Actinidia chinensis HOM05D002067 ORTHO05D002244 1.2e-22 110.2 113 61.1
PSO832G0919 Papaver somniferum HOM05D006869 ORTHO05D008641 1.2e-22 110.2 105 63.8
BolC5t32616H Brassica oleracea HOM05D006869 ORTHO05D008641 1.6e-22 109.8 81 84.0
Hund14421 Selenicereus undatus HOM05D006869 ORTHO05D008641 1.6e-22 109.8 113 59.3
FAN13G1368 Fragaria x ananassa HOM05D006869 ORTHO05D008641 2.1e-22 109.4 119 58.0
Glyma.15G248100 Glycine max HOM05D006869 ORTHO05D008641 2.1e-22 109.4 104 65.4
arahy.Tifrunner.gnm1.ann1.4F5UFQ Arachis hypogaea HOM05D006869 ORTHO05D008641 2.8e-22 109.0 120 56.7
FAN04G2266 Fragaria x ananassa HOM05D006869 ORTHO05D008641 2.8e-22 109.0 115 59.1
Hma1.2p1_0414F.1_g147870 Hydrangea macrophylla HOM05D006869 ORTHO05D008641 2.8e-22 109.0 111 61.3
Os02g0279600 Oryza sativa ssp. japonica HOM05D006869 ORTHO05D008641 2.8e-22 109.0 95 65.3
Eucgr.E00305 Eucalyptus grandis HOM05D006869 ORTHO05D008641 3.6e-22 108.6 96 63.5
FAN08G2623 Fragaria x ananassa HOM05D006869 ORTHO05D008641 3.6e-22 108.6 119 57.1
PSO732G0001 Papaver somniferum HOM05D006869 ORTHO05D008641 4.7e-22 108.2 105 61.9
FAN18G0870 Fragaria x ananassa HOM05D006869 ORTHO05D008641 8.0e-22 107.5 115 58.3
Zm00001eb024260 Zea mays HOM05D006869 ORTHO05D008641 1.4e-21 106.7 111 58.6
Sopen06g021250 Solanum pennellii HOM05D006869 ORTHO05D008641 1.8e-21 106.3 130 52.3
PGSC0003DMG400026597 Solanum tuberosum HOM05D006869 ORTHO05D008641 2.3e-21 105.9 116 55.2
DCAR_024975 Daucus carota HOM05D006869 ORTHO05D008641 3.0e-21 105.5 104 58.7
ECA233G4479 Erigeron canadensis HOM05D006869 ORTHO05D008641 8.9e-21 104.0 104 56.7
Sabra01G0114100 Salix brachista HOM05D006869 ORTHO05D008641 2.0e-20 102.8 146 48.6
HPP92_026375 Vanilla planifolia HOM05D006869 ORTHO05D008641 2.6e-20 102.4 116 54.3
Lalb_Chr25g0285441 Lupinus albus HOM05D006869 ORTHO05D008641 3.4e-20 102.1 97 61.9
HanXRQChr08g0227941 Helianthus annuus HOM05D006869 ORTHO05D008641 9.8e-20 100.5 110 56.4
unitig_746.g26748 Utricularia gibba HOM05D006869 ORTHO05D008641 1.7e-19 99.8 112 54.5
DCAR_005606 Daucus carota HOM05D006869 ORTHO05D008641 1.4e-18 96.7 134 48.5
Actinidia14827 Actinidia chinensis HOM05D006869 ORTHO05D008641 2.4e-18 95.9 108 55.6
Gorai.006G215800 Gossypium raimondii HOM05D006869 ORTHO05D008641 5.4e-18 94.7 159 45.3
Sed0006536 Sechium edule HOM05D006869 ORTHO05D008641 7.0e-18 94.4 87 65.5
Nitab4.5_0003100g0080 Nicotiana tabacum HOM05D006869 ORTHO05D008641 2.3e-16 89.4 149 43.6
Dinv25192 Davidia involucrata HOM05D006869 ORTHO05D008641 2.5e-15 85.9 106 50.9
SEGI_28722 Sequoiadendron giganteum HOM05D006869 ORTHO05D008641 1.6e-14 83.2 98 53.1
SGA_v2.0_scaffold94G28479 Striga asiatica HOM05D006869 ORTHO05D008641 2.1e-14 82.8 94 55.3
Oeu015441.1 Olea europaea HOM05D006869 ORTHO05D008641 3.6e-14 82.0 80 60.0
Rhsim07G0123600 Rhododendron simsii HOM05D006869 ORTHO05D008641 1.1e-13 80.5 75 61.3
vmacro14155 Vaccinium macrocarpon HOM05D006869 ORTHO05D008641 1.1e-13 80.5 72 62.5
EL10Ac5g12174 Beta vulgaris HOM05D006869 ORTHO05D008641 1.8e-13 79.7 76 60.5
Ah.07g200090 Amaranthus hybridus HOM05D006869 ORTHO05D008641 2.3e-13 79.3 74 59.5
MBI04_g13865_MAGBIO Magnolia biondii HOM05D006869 ORTHO05D008641 3.1e-13 79.0 86 54.7
Psat1g009440 Pisum sativum HOM05D006869 ORTHO05D008641 2.0e-12 76.3 66 71.2
ATR0049G078 Amborella trichopoda HOM05D006869 ORTHO05D008641 3.4e-12 75.5 85 54.1
Lsat_1_v5_gn_6_67180 Lactuca sativa HOM05D006869 ORTHO05D008641 2.2e-11 72.8 65 61.5
Cc08_g02310 Coffea canephora HOM05D006869 ORTHO05D008641 2.4e-10 69.3 86 45.3
Mapoly0009s0146 Marchantia polymorpha HOM05D006869 ORTHO05D008641 4.1e-10 68.6 106 39.6
Nitab4.5_0004658g0060 Nicotiana tabacum HOM05D006869 ORTHO05D008641 7.0e-10 67.8 74 54.1
SalBow6G5905 Salvia bowleyana HOM05D006869 ORTHO05D008641 7.0e-10 67.8 68 51.5
Peaxi162Scf00497g00098 Petunia axillaris HOM05D006869 ORTHO05D008641 9.2e-10 67.4 70 55.7
Haze_08288 Corylus avellana HOM05D006869 ORTHO05D008641 4.3e-07 58.5 42 73.8
Zm00001eb390630 Zea mays HOM05D006869 ORTHO05D008641 4.3e-07 58.5 49 69.4
AagrBONN_evm.TU.Sc2ySwM_228.2858 Anthoceros agrestis HOM05D006869 ORTHO05D008641 7.3e-07 57.8 109 37.6
Dinv28924 Davidia involucrata HOM05D002067 ORTHO05D002244 1.2e-06 57.0 41 70.7
Sed0003750 Sechium edule HOM05D006869 ORTHO05D008641 2.1e-06 56.2 53 66.0
vmacro23515 Vaccinium macrocarpon HOM05D006869 ORTHO05D008641 4.7e-06 55.1 46 65.2
PGR142G3578 Punica granatum HOM05D006869 ORTHO05D008641 8.1e-06 54.3 51 54.9


User provided reference genes

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