Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p33000 Brassica napus HOM05D006717 ORTHO05D008139 4.8e-38 160.6 78 100.0
BraA09t38841Z Brassica rapa HOM05D006717 ORTHO05D008139 4.8e-38 160.6 78 100.0
A09p32990 Brassica napus HOM05D006717 ORTHO05D008139 1.6e-36 155.6 78 97.4
A09p33020 Brassica napus HOM05D006717 ORTHO05D008139 1.6e-36 155.6 78 97.4
BraA09t38839Z Brassica rapa HOM05D006717 ORTHO05D008139 1.6e-36 155.6 78 97.4
BraA09t38843Z Brassica rapa HOM05D006717 ORTHO05D008139 1.6e-36 155.6 78 97.4
A09p33030 Brassica napus HOM05D006717 ORTHO05D008139 4.5e-36 154.1 78 96.2
BraA09t38844Z Brassica rapa HOM05D006717 ORTHO05D008139 4.5e-36 154.1 78 96.2
BraA09t38827Z Brassica rapa HOM05D006717 ORTHO05D008139 5.5e-34 147.1 78 92.3
BolC6t36416H Brassica oleracea HOM05D006717 ORTHO05D008139 1.2e-33 146.0 78 92.3
BraA09t38826Z Brassica rapa HOM05D006717 ORTHO05D008139 1.6e-33 145.6 78 91.0
BraA09t38828Z Brassica rapa HOM05D006717 ORTHO05D008139 2.1e-33 145.2 78 91.0
BraA06t26629Z Brassica rapa HOM05D006717 ORTHO05D008139 2.3e-32 141.7 78 88.5
BraA09t38825Z Brassica rapa HOM05D006717 ORTHO05D008139 1.2e-31 139.4 78 87.2
BraA09t38840Z Brassica rapa HOM05D006717 ORTHO05D008139 8.3e-30 133.3 65 95.4
A09p33010 Brassica napus HOM05D006717 ORTHO05D008139 2.0e-23 112.1 58 96.6
C05p20820 Brassica napus HOM05D006717 ORTHO05D008139 3.5e-20 101.3 78 61.5
BolC5t30781H Brassica oleracea HOM05D006717 ORTHO05D008139 3.5e-20 101.3 78 61.5
Thhalv10009544m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 4.5e-20 100.9 78 64.1
A05p20110 Brassica napus HOM05D006717 ORTHO05D008139 5.9e-20 100.5 77 66.2
Thhalv10009676m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 1.0e-19 99.8 78 64.1
CARHR031850 Cardamine hirsuta HOM05D006717 ORTHO05D008139 3.8e-19 97.8 78 59.0
BolC5t32089H Brassica oleracea HOM05D006717 ORTHO05D008139 1.5e-18 95.9 64 71.9
Thhalv10009885m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 1.5e-18 95.9 77 61.0
BcaB07g32182 Brassica carinata HOM05D006717 ORTHO05D008139 3.3e-18 94.7 57 73.7
A05p37210 Brassica napus HOM05D006717 ORTHO05D008139 2.8e-17 91.7 65 70.8
AT5G38378 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 4.0e-16 87.8 78 55.1
Thhalv10009497m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 1.2e-15 86.3 78 53.8
AT1G58242 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 2.0e-15 85.5 75 54.7
AT5G36720 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 5.7e-15 84.0 78 53.8
AT5G36805 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 5.7e-15 84.0 78 53.8
Carub.0005s1133 Capsella rubella HOM05D006717 ORTHO05D008139 5.7e-15 84.0 78 57.7
AT5G34828 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.7e-14 82.4 79 50.6
AL2G18220 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 3.7e-14 81.3 79 50.6
AL2G18240 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 4.9e-14 80.9 75 50.7
AL1G35140 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 6.3e-14 80.5 78 47.4
CARHR022290 Cardamine hirsuta HOM05D006717 ORTHO05D008139 8.3e-14 80.1 78 42.3
AL1G35260 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 1.8e-13 79.0 78 46.2
AL1G35280 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 1.8e-13 79.0 78 46.2
AT1G58248 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.8e-13 79.0 78 48.7
AL2G18250 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 3.2e-13 78.2 78 50.0
A07p14390 Brassica napus HOM05D006717 ORTHO05D008139 4.1e-13 77.8 62 58.1
BraA07t29193Z Brassica rapa HOM05D006717 ORTHO05D008139 4.1e-13 77.8 62 58.1
AT3G24465 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 5.4e-13 77.4 78 50.0
BcaC05g26104 Brassica carinata HOM05D006717 ORTHO05D008139 5.4e-13 77.4 43 74.4
Carub.0001s2130 Capsella rubella HOM05D006717 ORTHO05D008139 5.4e-13 77.4 78 52.6
A07p14410 Brassica napus HOM05D006717 ORTHO05D008139 7.0e-13 77.0 62 58.1
AT1G58245 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.2e-12 76.3 73 49.3
AL1G35030 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 1.6e-12 75.9 78 48.7
Carub.0002s0633 Capsella rubella HOM05D006717 ORTHO05D008139 1.6e-12 75.9 78 43.6
BolC7t42647H Brassica oleracea HOM05D006717 ORTHO05D008139 3.5e-12 74.7 62 56.5
CARHR022330 Cardamine hirsuta HOM05D006717 ORTHO05D008139 4.6e-12 74.3 78 43.6
CARHR022280 Cardamine hirsuta HOM05D006717 ORTHO05D008139 5.9e-12 73.9 78 46.2
A07p14420 Brassica napus HOM05D006717 ORTHO05D008139 1.3e-11 72.8 61 55.7
AT1G21928 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 2.9e-11 71.6 79 44.3
AT1G34792 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 2.9e-11 71.6 67 49.3
AT1G34795 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 2.9e-11 71.6 67 49.3
AT1G34800 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 2.9e-11 71.6 67 49.3
AT1G34805 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 2.9e-11 71.6 67 49.3
AT1G34810 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 2.9e-11 71.6 67 49.3
AT1G34815 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 2.9e-11 71.6 67 49.3
AT1G34820 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 2.9e-11 71.6 67 49.3
AT1G34825 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 2.9e-11 71.6 67 49.3
AT1G34830 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 2.9e-11 71.6 67 49.3
AT1G34860 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 2.9e-11 71.6 67 49.3
Carub.0001s2141 Capsella rubella HOM05D006717 ORTHO05D008139 2.9e-11 71.6 78 44.9
AL1G35130 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 3.9e-11 71.2 65 50.8
AT1G21835 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 3.9e-11 71.2 78 46.2
CARHR022850 Cardamine hirsuta HOM05D006717 ORTHO05D008139 6.6e-11 70.5 78 43.6
CARHR213610 Cardamine hirsuta HOM05D006717 ORTHO05D008139 6.6e-11 70.5 65 49.2
A07p14400 Brassica napus HOM05D006717 ORTHO05D008139 1.1e-10 69.7 54 59.3
BraA07t29194Z Brassica rapa HOM05D006717 ORTHO05D008139 1.1e-10 69.7 54 59.3
AT1G21925 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.9e-10 68.9 79 43.0
Carub.0001s2128 Capsella rubella HOM05D006717 ORTHO05D008139 1.9e-10 68.9 78 51.3
AT1G34930 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 3.3e-10 68.2 67 46.3
Carub.0001s2131 Capsella rubella HOM05D006717 ORTHO05D008139 3.3e-10 68.2 78 48.7
AL1G65230 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 7.3e-10 67.0 41 70.7
AT1G35035 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 9.5e-10 66.6 67 47.8
BraA09t38842Z Brassica rapa HOM05D006717 ORTHO05D008139 9.5e-10 66.6 51 70.6
AL1G35270 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 1.6e-09 65.9 66 48.5
CARHR176330 Cardamine hirsuta HOM05D006717 ORTHO05D008139 2.8e-09 65.1 66 48.5
CARHR022210 Cardamine hirsuta HOM05D006717 ORTHO05D008139 8.0e-09 63.5 66 47.0
AT1G21866 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.4e-08 62.8 78 43.6
Thhalv10023052m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 1.4e-08 62.8 78 39.7
CARHR022300 Cardamine hirsuta HOM05D006717 ORTHO05D008139 4.0e-08 61.2 72 37.5
AT1G34840 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 5.2e-08 60.8 63 46.0
AT1G34850 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 5.2e-08 60.8 63 46.0
BolC5t30782H Brassica oleracea HOM05D006717 ORTHO05D008139 1.5e-07 59.3 79 41.8
AT1G21864 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 2.0e-07 58.9 78 42.3
BolC1t05874H Brassica oleracea HOM05D006717 ORTHO05D008139 3.4e-07 58.2 78 38.5
BolC1t05876H Brassica oleracea HOM05D006717 ORTHO05D008139 3.4e-07 58.2 78 38.5
AT1G54775 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 5.8e-07 57.4 63 44.4
BraA10t42559Z Brassica rapa HOM05D006717 ORTHO05D008139 5.8e-07 57.4 78 38.5
BolC3t17915H Brassica oleracea HOM05D006717 ORTHO05D008139 9.8e-07 56.6 78 37.2
BraA01t02119Z Brassica rapa HOM05D006717 ORTHO05D008139 9.8e-07 56.6 78 37.2
A06p17920 Brassica napus HOM05D006717 ORTHO05D008139 1.7e-06 55.8 79 40.5
BraA06t24882Z Brassica rapa HOM05D006717 ORTHO05D008139 1.7e-06 55.8 79 40.5
Thhalv10027249m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 1.7e-06 55.8 66 45.5
Aa31LG7G5910 Aethionema arabicum HOM05D006717 ORTHO05D008139 3.7e-06 54.7 78 37.2
THA.LOC104800186 Tarenaya hassleriana HOM05D006717 ORTHO05D008139 3.7e-06 54.7 76 34.2
Thhalv10009471m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 8.3e-06 53.5 65 40.0
Thhalv10027078m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 8.3e-06 53.5 65 41.5


User provided reference genes

Program Settings