Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p32990 Brassica napus HOM05D006717 ORTHO05D008139 1.3e-38 162.5 78 100.0
A09p33020 Brassica napus HOM05D006717 ORTHO05D008139 1.3e-38 162.5 78 100.0
BraA09t38839Z Brassica rapa HOM05D006717 ORTHO05D008139 1.3e-38 162.5 78 100.0
BraA09t38843Z Brassica rapa HOM05D006717 ORTHO05D008139 1.3e-38 162.5 78 100.0
A09p33030 Brassica napus HOM05D006717 ORTHO05D008139 3.7e-38 161.0 78 98.7
BraA09t38844Z Brassica rapa HOM05D006717 ORTHO05D008139 3.7e-38 161.0 78 98.7
A09p33000 Brassica napus HOM05D006717 ORTHO05D008139 1.2e-36 156.0 78 97.4
BraA09t38841Z Brassica rapa HOM05D006717 ORTHO05D008139 1.2e-36 156.0 78 97.4
BraA09t38827Z Brassica rapa HOM05D006717 ORTHO05D008139 4.5e-36 154.1 78 94.9
BolC6t36416H Brassica oleracea HOM05D006717 ORTHO05D008139 1.0e-35 152.9 78 94.9
BraA09t38826Z Brassica rapa HOM05D006717 ORTHO05D008139 1.3e-35 152.5 78 93.6
BraA09t38828Z Brassica rapa HOM05D006717 ORTHO05D008139 1.7e-35 152.1 78 93.6
BraA09t38825Z Brassica rapa HOM05D006717 ORTHO05D008139 9.4e-34 146.4 78 89.7
BraA06t26629Z Brassica rapa HOM05D006717 ORTHO05D008139 8.8e-32 139.8 78 88.5
BraA09t38840Z Brassica rapa HOM05D006717 ORTHO05D008139 6.3e-30 133.7 65 95.4
A09p33010 Brassica napus HOM05D006717 ORTHO05D008139 1.6e-25 119.0 58 100.0
Thhalv10009544m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 2.4e-21 105.1 78 65.4
Thhalv10009676m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 5.4e-21 104.0 78 65.4
CARHR031850 Cardamine hirsuta HOM05D006717 ORTHO05D008139 2.7e-20 101.7 78 60.3
A05p20110 Brassica napus HOM05D006717 ORTHO05D008139 5.9e-20 100.5 77 66.2
Thhalv10009885m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 7.7e-20 100.1 77 62.3
C05p20820 Brassica napus HOM05D006717 ORTHO05D008139 1.7e-19 99.0 78 61.5
BolC5t30781H Brassica oleracea HOM05D006717 ORTHO05D008139 1.7e-19 99.0 78 61.5
BolC5t32089H Brassica oleracea HOM05D006717 ORTHO05D008139 1.5e-18 95.9 64 71.9
BcaB07g32182 Brassica carinata HOM05D006717 ORTHO05D008139 3.3e-18 94.7 57 73.7
A05p37210 Brassica napus HOM05D006717 ORTHO05D008139 2.1e-17 92.0 65 70.8
Thhalv10009497m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 4.7e-17 90.9 78 55.1
Carub.0005s1133 Capsella rubella HOM05D006717 ORTHO05D008139 4.0e-16 87.8 78 59.0
AL1G35140 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 4.4e-15 84.3 78 48.7
CARHR022290 Cardamine hirsuta HOM05D006717 ORTHO05D008139 5.7e-15 84.0 78 43.6
AT1G58248 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 9.8e-15 83.2 78 50.0
AT5G38378 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 9.8e-15 83.2 78 52.6
AL1G35260 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 1.3e-14 82.8 78 47.4
AL1G35280 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 1.3e-14 82.8 78 47.4
AL2G18250 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 1.7e-14 82.4 78 51.3
Carub.0001s2130 Capsella rubella HOM05D006717 ORTHO05D008139 3.7e-14 81.3 78 53.8
AT1G58242 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 4.9e-14 80.9 75 52.0
AT1G58245 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 6.3e-14 80.5 72 51.4
Carub.0002s0633 Capsella rubella HOM05D006717 ORTHO05D008139 8.3e-14 80.1 78 44.9
AT5G36720 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.4e-13 79.3 78 51.3
AT5G36805 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.4e-13 79.3 78 51.3
AL1G35030 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 1.8e-13 79.0 78 50.0
CARHR022330 Cardamine hirsuta HOM05D006717 ORTHO05D008139 2.4e-13 78.6 78 44.9
AL2G18220 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 4.1e-13 77.8 79 49.4
AT5G34828 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 4.1e-13 77.8 79 48.1
CARHR022280 Cardamine hirsuta HOM05D006717 ORTHO05D008139 4.1e-13 77.8 78 47.4
AL2G18240 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 5.4e-13 77.4 75 49.3
BcaC05g26104 Brassica carinata HOM05D006717 ORTHO05D008139 5.4e-13 77.4 43 74.4
A07p14390 Brassica napus HOM05D006717 ORTHO05D008139 5.4e-13 77.4 61 57.4
BraA07t29193Z Brassica rapa HOM05D006717 ORTHO05D008139 5.4e-13 77.4 61 57.4
A07p14410 Brassica napus HOM05D006717 ORTHO05D008139 9.2e-13 76.6 61 57.4
AT1G21928 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 2.0e-12 75.5 79 45.6
AL1G35130 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 2.7e-12 75.1 65 52.3
AT1G34792 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 2.7e-12 75.1 71 47.9
AT1G34795 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 2.7e-12 75.1 71 47.9
AT1G34800 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 2.7e-12 75.1 71 47.9
AT1G34805 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 2.7e-12 75.1 71 47.9
AT1G34810 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 2.7e-12 75.1 71 47.9
AT1G34815 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 2.7e-12 75.1 71 47.9
AT1G34820 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 2.7e-12 75.1 71 47.9
AT1G34825 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 2.7e-12 75.1 71 47.9
AT1G34830 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 2.7e-12 75.1 71 47.9
BolC7t42647H Brassica oleracea HOM05D006717 ORTHO05D008139 4.6e-12 74.3 61 55.7
CARHR022850 Cardamine hirsuta HOM05D006717 ORTHO05D008139 4.6e-12 74.3 78 44.9
AT1G21835 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 5.9e-12 73.9 78 47.4
AT3G24465 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 5.9e-12 73.9 78 48.7
A07p14420 Brassica napus HOM05D006717 ORTHO05D008139 1.0e-11 73.2 61 55.7
AT1G21925 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.3e-11 72.8 79 44.3
Carub.0001s2128 Capsella rubella HOM05D006717 ORTHO05D008139 1.3e-11 72.8 78 52.6
Carub.0001s2131 Capsella rubella HOM05D006717 ORTHO05D008139 2.3e-11 72.0 78 50.0
Carub.0001s2141 Capsella rubella HOM05D006717 ORTHO05D008139 2.3e-11 72.0 67 47.8
AT1G34860 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 2.9e-11 71.6 67 49.3
AL1G35270 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 1.1e-10 69.7 66 50.0
A07p14400 Brassica napus HOM05D006717 ORTHO05D008139 1.1e-10 69.7 54 59.3
BraA07t29194Z Brassica rapa HOM05D006717 ORTHO05D008139 1.1e-10 69.7 54 59.3
CARHR176330 Cardamine hirsuta HOM05D006717 ORTHO05D008139 1.1e-10 69.7 66 50.0
AT1G34930 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 3.3e-10 68.2 67 46.3
CARHR213610 Cardamine hirsuta HOM05D006717 ORTHO05D008139 3.3e-10 68.2 65 49.2
AT1G21866 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 5.6e-10 67.4 78 44.9
CARHR022210 Cardamine hirsuta HOM05D006717 ORTHO05D008139 5.6e-10 67.4 66 48.5
Thhalv10023052m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 5.6e-10 67.4 78 41.0
AL1G65230 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 7.3e-10 67.0 41 70.7
AT1G35035 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 9.5e-10 66.6 67 47.8
CARHR022300 Cardamine hirsuta HOM05D006717 ORTHO05D008139 2.8e-09 65.1 72 38.9
AT1G21864 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 8.0e-09 63.5 78 43.6
AT1G34840 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.4e-08 62.8 71 42.3
AT1G34850 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.4e-08 62.8 71 42.3
BraA09t38842Z Brassica rapa HOM05D006717 ORTHO05D008139 2.3e-08 62.0 51 66.7
BolC5t30782H Brassica oleracea HOM05D006717 ORTHO05D008139 6.8e-08 60.5 79 41.8
Thhalv10027249m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 6.8e-08 60.5 66 47.0
THA.LOC104800186 Tarenaya hassleriana HOM05D006717 ORTHO05D008139 2.0e-07 58.9 76 35.5
Aa31LG7G5910 Aethionema arabicum HOM05D006717 ORTHO05D008139 2.6e-07 58.5 78 38.5
Thhalv10027078m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 3.4e-07 58.2 65 43.1
A06p17920 Brassica napus HOM05D006717 ORTHO05D008139 7.5e-07 57.0 79 40.5
BraA06t24882Z Brassica rapa HOM05D006717 ORTHO05D008139 7.5e-07 57.0 79 40.5
AL1G35060 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 9.8e-07 56.6 78 38.5
Carub.0001s2140 Capsella rubella HOM05D006717 ORTHO05D008139 1.3e-06 56.2 74 37.8
BolC1t05874H Brassica oleracea HOM05D006717 ORTHO05D008139 4.9e-06 54.3 78 37.2
BolC1t05876H Brassica oleracea HOM05D006717 ORTHO05D008139 4.9e-06 54.3 78 37.2
AT1G54775 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 6.4e-06 53.9 63 42.9
Thhalv10009471m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 6.4e-06 53.9 65 40.0
BraA10t42559Z Brassica rapa HOM05D006717 ORTHO05D008139 8.3e-06 53.5 78 37.2


User provided reference genes

Program Settings