Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p31890 Brassica napus HOM05D003774 ORTHO05D010174 9.8e-156 553.5 298 100.0
BcaC08g43723 Brassica carinata HOM05D003774 ORTHO05D010174 3.8e-152 541.6 298 98.0
C06p11060 Brassica napus HOM05D003774 ORTHO05D010174 3.8e-152 541.6 298 97.7
BolC6t36225H Brassica oleracea HOM05D003774 ORTHO05D010174 8.6e-152 540.4 298 97.7
BraA09t38729Z Brassica rapa HOM05D003774 ORTHO05D010174 1.1e-143 513.5 276 98.9
BcaB07g33098 Brassica carinata HOM05D003774 ORTHO05D010174 2.5e-143 512.3 296 92.6
Sp1g30100 Schrenkiella parvula HOM05D003774 ORTHO05D010174 1.7e-136 489.6 297 89.9
AL1G50100 Arabidopsis lyrata HOM05D003774 ORTHO05D010174 2.1e-129 466.1 296 85.5
Thhalv10001819m.g Eutrema salsugineum HOM05D003774 ORTHO05D010174 1.3e-128 463.4 296 84.8
Carub.0347s0001 Capsella rubella HOM05D003774 ORTHO05D010174 8.9e-125 450.7 296 82.1
THA.LOC104816539 Tarenaya hassleriana HOM05D003774 ORTHO05D010174 1.3e-96 357.1 270 69.3
AT1G35340 Arabidopsis thaliana HOM05D003774 ORTHO05D010174 6.7e-96 354.8 211 88.6
Aa31LG6G8720 Aethionema arabicum HOM05D003774 ORTHO05D009174 1.3e-91 340.5 273 70.0
Cfa012970 Carpinus fangiana HOM05D003774 ORTHO05D010174 1.8e-88 330.1 310 58.7
CiPaw.07G235600 Carya illinoinensis HOM05D003774 ORTHO05D010174 2.1e-86 323.2 271 62.4
Manes.18G106000 Manihot esculenta HOM05D003774 ORTHO05D010174 2.8e-86 322.8 283 59.7
Thecc.08G192700 Theobroma cacao HOM05D003774 ORTHO05D010174 1.8e-85 320.1 286 62.2
Ciclev10003535m.g Citrus clementina HOM05D003774 ORTHO05D010174 2.9e-83 312.8 264 63.6
RcHm_v2.0_Chr7g0227131 Rosa chinensis HOM05D003774 ORTHO05D010174 8.4e-83 311.2 261 64.0
FAN08G2588 Fragaria x ananassa HOM05D003774 ORTHO05D010174 1.2e-81 307.4 260 62.3
PGSC0003DMG400026729 Solanum tuberosum HOM05D003774 ORTHO05D010174 1.2e-81 307.4 257 61.9
FvH4_5g31600 Fragaria vesca HOM05D003774 ORTHO05D010174 4.6e-81 305.4 258 62.4
Nitab4.5_0005616g0030 Nicotiana tabacum HOM05D003774 ORTHO05D010174 4.6e-81 305.4 257 61.9
Nitab4.5_0001463g0060 Nicotiana tabacum HOM05D003774 ORTHO05D010174 1.8e-80 303.5 257 61.5
Eucgr.F02989 Eucalyptus grandis HOM05D003774 ORTHO05D010174 2.3e-80 303.1 269 62.5
CANSAT25G1591 Cannabis sativa HOM05D003774 ORTHO05D010174 3.0e-80 302.8 251 62.9
Prupe.1G555700 Prunus persica HOM05D003774 ORTHO05D010174 3.0e-80 302.8 289 57.8
Sabra13G0091200 Salix brachista HOM05D003774 ORTHO05D009174 3.0e-80 302.8 263 61.6
CAN.G1483.1 Capsicum annuum HOM05D003774 ORTHO05D010174 5.1e-80 302.0 257 61.1
Solyc11g027830.2 Solanum lycopersicum HOM05D003774 ORTHO05D010174 5.1e-80 302.0 257 61.5
Atru.chr13.2372 Acer truncatum HOM05D003774 ORTHO05D010174 6.7e-80 301.6 258 62.4
FAN07G1602 Fragaria x ananassa HOM05D003774 ORTHO05D010174 1.5e-79 300.4 260 61.5
Sopen11g022590 Solanum pennellii HOM05D003774 ORTHO05D010174 3.3e-79 299.3 261 60.9
TWI14G1031 Tripterygium wilfordii HOM05D003774 ORTHO05D010174 3.3e-79 299.3 233 69.1
PGR042G3332 Punica granatum HOM05D003774 ORTHO05D010174 5.7e-79 298.5 259 61.0
Peaxi162Scf00688g00424 Petunia axillaris HOM05D003774 ORTHO05D010174 1.1e-77 294.3 257 58.8
Haze_21314 Corylus avellana HOM05D003774 ORTHO05D010174 5.3e-77 292.0 277 58.1
MD14G1036300 Malus domestica HOM05D003774 ORTHO05D010174 1.2e-76 290.8 247 62.8
PSO170G3079 Papaver somniferum HOM05D003774 ORTHO05D010174 1.2e-76 290.8 287 56.8
PSO782G0406 Papaver somniferum HOM05D003774 ORTHO05D010174 2.6e-76 289.7 264 61.0
Lsat_1_v5_gn_1_25800 Lactuca sativa HOM05D003774 ORTHO05D010174 2.2e-75 286.6 257 58.8
Cc00_g20990 Coffea canephora HOM05D003774 ORTHO05D010174 3.8e-75 285.8 243 62.6
HanXRQChr02g0036571 Helianthus annuus HOM05D003774 ORTHO05D010174 3.8e-75 285.8 265 56.2
CsaV3_5G040540 Cucumis sativus L. HOM05D003774 ORTHO05D010174 1.4e-74 283.9 246 61.0
Migut.C01324 Erythranthe guttata HOM05D003774 ORTHO05D010174 2.5e-74 283.1 258 59.7
Actinidia29409 Actinidia chinensis HOM05D003774 ORTHO05D010174 3.2e-74 282.7 247 63.2
DCAR_017444 Daucus carota HOM05D003774 ORTHO05D010174 5.5e-74 282.0 248 59.7
MBI03_g45112_MAGBIO Magnolia biondii HOM05D003774 ORTHO05D010174 7.4e-71 271.6 270 58.5
GSVIVG01026088001 Vitis vinifera HOM05D003774 ORTHO05D010174 2.0e-68 263.5 203 66.0
Cpa.g.sc66.3 Carica papaya HOM05D003774 ORTHO05D010174 1.3e-67 260.8 210 65.2
FAN18G3876 Fragaria x ananassa HOM05D003402 ORTHO05D003939 7.2e-66 255.0 257 54.9
Potri.013G105500 Populus trichocarpa HOM05D003774 ORTHO05D010174 1.6e-65 253.8 215 62.3
ClCG08G000190 Citrullus lanatus HOM05D003774 ORTHO05D010174 2.1e-65 253.4 278 52.9
COL.COLO4_24648 Corchorus olitorius HOM05D003774 ORTHO05D010174 2.1e-65 253.4 235 59.6
MBI03_g46804_MAGBIO Magnolia biondii HOM05D003774 ORTHO05D010174 4.1e-61 239.2 233 58.8
ECA247G3883 Erigeron canadensis HOM05D003774 ORTHO05D009174 9.1e-61 238.0 210 59.0
SEGI_18058 Sequoiadendron giganteum HOM05D003774 ORTHO05D010174 5.9e-60 235.3 248 52.0
MD04G1056900 Malus domestica HOM05D003774 ORTHO05D010174 1.3e-59 234.2 212 59.0
CARHR034170 Cardamine hirsuta HOM05D003774 ORTHO05D010174 1.9e-58 230.3 149 85.2
Zm00001eb169160 Zea mays HOM05D003774 ORTHO05D010174 6.1e-57 225.3 244 52.5
Oeu013897.1 Olea europaea HOM05D003774 ORTHO05D010174 9.7e-55 218.0 209 55.5
Pp3c18_9200 Physcomitrium patens HOM05D003774 ORTHO05D010174 1.0e-51 208.0 248 45.6
Mapoly0085s0045 Marchantia polymorpha HOM05D003774 ORTHO05D010174 4.0e-48 196.1 269 41.3
Dinv41759 Davidia involucrata HOM05D003774 ORTHO05D010174 8.5e-43 178.3 150 61.3
MELO3C022227.2 Cucumis melo HOM05D003774 ORTHO05D010174 2.3e-40 170.2 246 43.1
TAR628G1250 Trochodendron aralioides HOM05D003774 ORTHO05D010174 2.3e-32 143.7 121 65.3
Rhsim11G0052800 Rhododendron simsii HOM05D003774 ORTHO05D000166 5.2e-32 142.5 113 65.5
MSTRG.1569 Avicennia marina HOM05D003774 ORTHO05D010174 1.1e-29 134.8 125 60.0
Lj7A284G37 Lonicera japonica HOM05D003774 ORTHO05D010174 1.0e-27 128.3 86 74.4
AagrBONN_evm.TU.Sc2ySwM_340.403 Anthoceros agrestis HOM05D000737 ORTHO05D000581 3.9e-27 126.3 233 34.8
FvH4_5g26640 Fragaria vesca HOM05D003774 ORTHO05D010174 1.8e-24 117.5 136 50.0
Os11g0219000 Oryza sativa ssp. japonica HOM05D003774 ORTHO05D010174 1.0e-19 101.7 110 49.1
Lj7A284T38 Lonicera japonica HOM05D003774 ORTHO05D010174 6.6e-19 99.0 101 54.5
Cre16.g670500 Chlamydomonas reinhardtii HOM05D003774 ORTHO05D010174 7.1e-13 79.0 334 24.6
MCO03G373 Micromonas commoda HOM05D003774 ORTHO05D010174 1.7e-11 74.3 295 27.5
MD15G1405700 Malus domestica HOM05D003774 ORTHO05D010174 2.6e-07 60.5 147 32.0
MBI03_g48045_MAGBIO Magnolia biondii HOM05D003774 ORTHO05D010174 8.4e-06 55.5 49 61.2


User provided reference genes

Program Settings