Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p31850 Brassica napus HOM05D000353 ORTHO05D000174 1.7e-51 205.7 100 100.0
C09p49200 Brassica napus HOM05D000353 ORTHO05D000174 7.3e-31 137.1 74 93.2
BolC4t26686H Brassica oleracea HOM05D000353 ORTHO05D000174 7.3e-31 137.1 74 93.2
C02p27610 Brassica napus HOM05D000353 ORTHO05D000174 1.3e-30 136.3 74 93.2
A05p21760 Brassica napus HOM05D000353 ORTHO05D000174 1.6e-30 136.0 74 91.9
BraA05t21097Z Brassica rapa HOM05D000353 ORTHO05D000174 1.6e-30 136.0 74 91.9
A01p18290 Brassica napus HOM05D000353 ORTHO05D000174 2.1e-30 135.6 74 91.9
C09p23350 Brassica napus HOM05D000353 ORTHO05D000174 3.6e-30 134.8 74 91.9
BcaC06g33697 Brassica carinata HOM05D000353 ORTHO05D000174 8.1e-30 133.7 72 93.1
A05p21320 Brassica napus HOM05D000353 ORTHO05D000174 8.1e-30 133.7 71 94.4
BraA05t21040Z Brassica rapa HOM05D000353 ORTHO05D000174 8.1e-30 133.7 71 94.4
BolC1t03173H Brassica oleracea HOM05D000353 ORTHO05D000174 1.1e-29 133.3 74 90.5
A09p27800 Brassica napus HOM05D000353 ORTHO05D000174 2.4e-29 132.1 74 90.5
BolC9t54833H Brassica oleracea HOM05D000096 ORTHO05D000045 2.4e-29 132.1 74 89.2
BraA09t38350Z Brassica rapa HOM05D000353 ORTHO05D000174 2.4e-29 132.1 74 90.5
C05p58280 Brassica napus HOM05D000096 ORTHO05D000045 6.9e-29 130.6 74 89.2
C09p17500 Brassica napus HOM05D000353 ORTHO05D000174 6.9e-29 130.6 74 89.2
BolC2t09050H Brassica oleracea HOM05D000353 ORTHO05D000174 6.9e-29 130.6 74 89.2
BolC5t34002H Brassica oleracea HOM05D000353 ORTHO05D000174 6.9e-29 130.6 74 89.2
A01p26990 Brassica napus HOM05D000353 ORTHO05D000174 1.2e-28 129.8 74 89.2
A06p21960 Brassica napus HOM05D000353 ORTHO05D000174 1.2e-28 129.8 74 85.1
A09p22610 Brassica napus HOM05D000353 ORTHO05D000174 1.5e-28 129.4 74 87.8
C05p39980 Brassica napus HOM05D000353 ORTHO05D000174 2.6e-28 128.6 71 91.5
A03p67580 Brassica napus HOM05D000353 ORTHO05D000174 3.4e-28 128.3 74 87.8
C03p63100 Brassica napus HOM05D000353 ORTHO05D000174 3.4e-28 128.3 74 87.8
BcaC03g15824 Brassica carinata HOM05D000353 ORTHO05D000174 2.2e-27 125.6 72 88.9
A07p14780 Brassica napus HOM05D000353 ORTHO05D000174 4.9e-27 124.4 83 79.5
BolC9t59257H Brassica oleracea HOM05D000353 ORTHO05D000174 6.4e-27 124.0 86 76.7
BolC6t39887H Brassica oleracea HOM05D000353 ORTHO05D000174 8.4e-27 123.6 101 70.3
BolC5t34017H Brassica oleracea HOM05D000353 ORTHO05D000174 2.4e-26 122.1 74 83.8
BraA01t02710Z Brassica rapa HOM05D000353 ORTHO05D000174 3.2e-26 121.7 80 81.2
A09p33510 Brassica napus HOM05D000353 ORTHO05D000174 4.2e-26 121.3 69 87.0
BraA01t02840Z Brassica rapa HOM05D000353 ORTHO05D000174 5.4e-26 120.9 86 76.7
A02p28640 Brassica napus HOM05D000353 ORTHO05D000174 1.6e-25 119.4 69 85.5
C09p64200 Brassica napus HOM05D000353 ORTHO05D000174 4.6e-25 117.9 74 82.4
BraA02t07899Z Brassica rapa HOM05D000353 ORTHO05D000174 7.8e-25 117.1 69 84.1
BcaB01g01518 Brassica carinata HOM05D000353 ORTHO05D000174 3.0e-24 115.2 71 80.3
BolC5t32309H Brassica oleracea HOM05D000353 ORTHO05D000174 6.6e-24 114.0 84 73.8
BcaB03g14941 Brassica carinata HOM05D000353 ORTHO05D000174 1.1e-23 113.2 69 81.2
BcaB04g18330 Brassica carinata HOM05D000353 ORTHO05D000174 1.4e-21 106.3 70 72.9
BcaC08g47173 Brassica carinata HOM05D000353 ORTHO05D010037 1.4e-21 106.3 70 72.9
BcaB02g11004 Brassica carinata HOM05D000353 ORTHO05D000174 2.4e-21 105.5 70 71.4
C05p35900 Brassica napus HOM05D000353 ORTHO05D000174 6.9e-21 104.0 69 78.3
BcaB02g06410 Brassica carinata HOM05D000353 ORTHO05D000174 2.0e-20 102.4 70 70.0
BcaC03g15183 Brassica carinata HOM05D000353 ORTHO05D000174 4.9e-19 97.8 51 96.1
BolC2t10804H Brassica oleracea HOM05D000096 ORTHO05D000045 6.4e-19 97.4 53 92.5
BolC5t31794H Brassica oleracea HOM05D000096 ORTHO05D000045 7.1e-18 94.0 53 88.7
A02p24410 Brassica napus HOM05D000353 ORTHO05D000174 3.5e-17 91.7 49 89.8
BcaC05g29111 Brassica carinata HOM05D000353 ORTHO05D000174 6.0e-17 90.9 72 70.8
A09p37000 Brassica napus HOM05D000353 ORTHO05D000174 1.8e-16 89.4 57 78.9
AL1G55630 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 2.9e-11 72.0 74 41.9
AL9U11500 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 6.5e-11 70.9 67 44.8
AL2G19920 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 1.4e-10 69.7 67 43.3
AL4G20710 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 1.4e-10 69.7 67 43.3
AL5G12710 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 1.4e-10 69.7 67 43.3
AL6G41920 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 1.4e-10 69.7 67 43.3
AL7G11640 Arabidopsis lyrata HOM05D000353 ORTHO05D010269 1.4e-10 69.7 67 43.3
AL8G21920 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 1.4e-10 69.7 67 43.3
AL2G22250 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 3.2e-10 68.6 67 43.3
AL1G50710 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 5.5e-10 67.8 67 43.3
A10p31040 Brassica napus HOM05D000353 ORTHO05D000174 1.6e-09 66.2 60 48.3
C04p16570 Brassica napus HOM05D000353 ORTHO05D000174 1.6e-09 66.2 60 48.3
C05p33950 Brassica napus HOM05D000353 ORTHO05D000174 1.6e-09 66.2 60 48.3
BolC2t08345H Brassica oleracea HOM05D000353 ORTHO05D000174 1.6e-09 66.2 60 48.3
BolC7t45258H Brassica oleracea HOM05D000353 ORTHO05D000174 1.6e-09 66.2 60 48.3
A07p29370 Brassica napus HOM05D000353 ORTHO05D000174 6.0e-09 64.3 60 51.7
C05p54270 Brassica napus HOM05D000353 ORTHO05D000174 6.0e-09 64.3 60 51.7
BcaC01g00912 Brassica carinata HOM05D000353 ORTHO05D000174 7.9e-09 63.9 60 48.3
BcaC04g21303 Brassica carinata HOM05D000353 ORTHO05D000174 7.9e-09 63.9 60 46.7
BcaC05g30097 Brassica carinata HOM05D000353 ORTHO05D000174 7.9e-09 63.9 60 46.7
C02p27140 Brassica napus HOM05D000353 ORTHO05D000174 1.0e-08 63.5 57 57.9
BolC3t19259H Brassica oleracea HOM05D004562 ORTHO05D005435 1.3e-08 63.2 40 75.0
C09p43850 Brassica napus HOM05D000353 ORTHO05D000174 1.8e-08 62.8 60 50.0
C03p75270 Brassica napus HOM05D000353 ORTHO05D000174 2.3e-08 62.4 60 50.0
C06p15640 Brassica napus HOM05D000353 ORTHO05D000174 2.3e-08 62.4 60 46.7
BolC3t19787H Brassica oleracea HOM05D000353 ORTHO05D000174 2.3e-08 62.4 60 50.0
BraA10t42954Z Brassica rapa HOM05D000353 ORTHO05D000174 2.3e-08 62.4 59 39.0
A07p36560 Brassica napus HOM05D000353 ORTHO05D000174 3.0e-08 62.0 60 45.0
AL1G26420 Arabidopsis lyrata HOM05D003358 ORTHO05D003864 3.9e-08 61.6 67 38.8
Thhalv10003070m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 5.1e-08 61.2 69 39.1
Thhalv10012323m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 6.7e-08 60.8 69 37.7
BcaC08g44543 Brassica carinata HOM05D000353 ORTHO05D000174 8.7e-08 60.5 60 45.0
A10p04490 Brassica napus HOM05D000353 ORTHO05D000174 8.7e-08 60.5 59 42.4
BcaB08g34954 Brassica carinata HOM05D000353 ORTHO05D000174 1.5e-07 59.7 58 41.4
C06p48210 Brassica napus HOM05D000353 ORTHO05D000174 1.5e-07 59.7 59 42.4
Carub.0005s0850 Capsella rubella HOM05D000353 ORTHO05D000174 1.5e-07 59.7 67 35.8
AT1G36510 Arabidopsis thaliana HOM05D000353 ORTHO05D010037 1.9e-07 59.3 67 46.3
AT3G32260 Arabidopsis thaliana HOM05D000353 ORTHO05D000174 2.5e-07 58.9 61 47.5
A03p65170 Brassica napus HOM05D000353 ORTHO05D000174 2.5e-07 58.9 57 45.6
BraA03t15575Z Brassica rapa HOM05D000353 ORTHO05D000174 2.5e-07 58.9 57 45.6
Thhalv10027286m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 2.5e-07 58.9 69 37.7
A02p32050 Brassica napus HOM05D000353 ORTHO05D000174 3.3e-07 58.5 60 41.7
C04p27440 Brassica napus HOM05D000353 ORTHO05D000174 3.3e-07 58.5 60 41.7
C06p06210 Brassica napus HOM05D000353 ORTHO05D000174 3.3e-07 58.5 57 43.9
C09p27100 Brassica napus HOM05D000353 ORTHO05D000174 3.3e-07 58.5 60 41.7
BolC4t24282H Brassica oleracea HOM05D000353 ORTHO05D000174 3.3e-07 58.5 60 41.7
BolC6t35732H Brassica oleracea HOM05D000353 ORTHO05D000174 3.3e-07 58.5 57 43.9
BolC8t47058H Brassica oleracea HOM05D000353 ORTHO05D000174 3.3e-07 58.5 60 41.7
BraA02t08216Z Brassica rapa HOM05D000353 ORTHO05D000174 3.3e-07 58.5 60 41.7
BraA03t14652Z Brassica rapa HOM05D000353 ORTHO05D000174 3.3e-07 58.5 60 45.0
BcaB02g10495 Brassica carinata HOM05D000353 ORTHO05D000174 4.3e-07 58.2 60 41.7
Thhalv10009292m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 4.3e-07 58.2 60 43.3
BcaB05g22552 Brassica carinata HOM05D000353 ORTHO05D000174 5.7e-07 57.8 60 43.3
A06p28310 Brassica napus HOM05D000353 ORTHO05D000174 5.7e-07 57.8 56 46.4
A09p11230 Brassica napus HOM05D000353 ORTHO05D000174 5.7e-07 57.8 72 41.7
C05p49950 Brassica napus HOM05D000353 ORTHO05D000174 5.7e-07 57.8 57 43.9
BolC4t24657H Brassica oleracea HOM05D000353 ORTHO05D000174 5.7e-07 57.8 57 43.9
BraA06t25773Z Brassica rapa HOM05D000353 ORTHO05D000174 5.7e-07 57.8 56 46.4
BraA07t28122Z Brassica rapa HOM05D000353 ORTHO05D000174 5.7e-07 57.8 56 46.4
BraA03t14653Z Brassica rapa HOM05D000353 ORTHO05D000174 7.4e-07 57.4 60 45.0
Carub.0004s0702 Capsella rubella HOM05D000353 ORTHO05D000174 7.4e-07 57.4 54 46.3
C03p18660 Brassica napus HOM05D000353 ORTHO05D000174 9.6e-07 57.0 60 41.7
C05p39920 Brassica napus HOM05D000353 ORTHO05D000174 9.6e-07 57.0 50 62.0
Carub.0012s0011 Capsella rubella HOM05D000353 ORTHO05D000174 9.6e-07 57.0 69 39.1
BcaB08g35926 Brassica carinata HOM05D009963 ORTHO05D013780 1.3e-06 56.6 64 42.2
BcaC06g36089 Brassica carinata HOM05D000353 ORTHO05D000174 1.3e-06 56.6 56 44.6
BolC4t23854H Brassica oleracea HOM05D000353 ORTHO05D000174 1.3e-06 56.6 57 43.9
BolC7t41214H Brassica oleracea HOM05D000353 ORTHO05D000174 1.3e-06 56.6 56 44.6
BraA03t15677Z Brassica rapa HOM05D000353 ORTHO05D000174 1.3e-06 56.6 60 50.0
BcaC03g17880 Brassica carinata HOM05D000353 ORTHO05D000174 1.6e-06 56.2 56 39.3
Carub.0007s3247 Capsella rubella HOM05D000353 ORTHO05D000174 1.6e-06 56.2 64 35.9
BcaC06g33647 Brassica carinata HOM05D000353 ORTHO05D000174 2.1e-06 55.8 55 41.8
BcaC06g35296 Brassica carinata HOM05D000353 ORTHO05D000174 2.1e-06 55.8 57 43.9
A05p27520 Brassica napus HOM05D000353 ORTHO05D000174 2.1e-06 55.8 59 42.4
C02p26060 Brassica napus HOM05D000353 ORTHO05D000174 2.1e-06 55.8 59 42.4
C07p17710 Brassica napus HOM05D000353 ORTHO05D000174 2.1e-06 55.8 57 43.9
BolC2t09219H Brassica oleracea HOM05D000353 ORTHO05D000174 2.1e-06 55.8 60 41.7
BolC7t42278H Brassica oleracea HOM05D000353 ORTHO05D000174 2.1e-06 55.8 57 43.9
BcaC05g26801 Brassica carinata HOM05D000353 ORTHO05D000174 3.7e-06 55.1 56 42.9
Carub.0076s0001 Capsella rubella HOM05D000353 ORTHO05D000174 3.7e-06 55.1 54 44.4
BcaB05g24866 Brassica carinata HOM05D000353 ORTHO05D000174 4.8e-06 54.7 60 40.0
C02p32960 Brassica napus HOM05D000353 ORTHO05D000174 4.8e-06 54.7 74 35.1
BcaC09g48500 Brassica carinata HOM05D000353 ORTHO05D000174 6.2e-06 54.3 56 37.5
Carub.0001s3383 Capsella rubella HOM05D000353 ORTHO05D000174 6.2e-06 54.3 64 39.1
Carub.0007s3602 Capsella rubella HOM05D000353 ORTHO05D000174 6.2e-06 54.3 61 41.0
BcaB06g28316 Brassica carinata HOM05D000353 ORTHO05D000174 8.2e-06 53.9 56 44.6
BcaB08g36623 Brassica carinata HOM05D000353 ORTHO05D000174 8.2e-06 53.9 56 42.9
C04p59210 Brassica napus HOM05D000353 ORTHO05D000174 8.2e-06 53.9 74 35.1
BolC4t27431H Brassica oleracea HOM05D000353 ORTHO05D000174 8.2e-06 53.9 74 35.1
BraA02t07844Z Brassica rapa HOM05D000353 ORTHO05D000174 8.2e-06 53.9 61 41.0


User provided reference genes

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