Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p30690 Brassica napus HOM05D006450 ORTHO05D001777 2.9e-41 171.4 82 100.0
Cpa.g.sc2112.1 Carica papaya HOM05D007851 ORTHO05D007849 2.1e-31 138.7 78 88.5
Migut.A01237 Erythranthe guttata HOM05D006450 ORTHO05D001777 2.5e-29 131.7 75 86.7
RhsimUnG0208900 Rhododendron simsii HOM05D006450 ORTHO05D001777 1.2e-26 122.9 68 91.2
A06p23720 Brassica napus HOM05D006450 ORTHO05D001777 7.6e-26 120.2 58 100.0
A06p23840 Brassica napus HOM05D006450 ORTHO05D001777 7.6e-26 120.2 58 100.0
A06p24610 Brassica napus HOM05D006450 ORTHO05D001777 7.6e-26 120.2 58 100.0
A09p31260 Brassica napus HOM05D006450 ORTHO05D001777 7.6e-26 120.2 58 100.0
BNapus_Darmor_BZH_scaffold_107p00070 Brassica napus HOM05D006450 ORTHO05D001777 7.6e-26 120.2 58 100.0
BNapus_Darmor_BZH_scaffold_107p00140 Brassica napus HOM05D006450 ORTHO05D001777 7.6e-26 120.2 58 100.0
Sc14g0004240 Simmondsia chinensis HOM05D006450 ORTHO05D001777 7.6e-26 120.2 84 73.8
arahy.Tifrunner.gnm1.ann1.IBA4PL Arachis hypogaea HOM05D006450 ORTHO05D001777 9.9e-26 119.8 78 79.5
BNapus_Darmor_BZH_scaffold_192p00010 Brassica napus HOM05D006450 ORTHO05D001777 9.9e-26 119.8 57 100.0
A06p23620 Brassica napus HOM05D006450 ORTHO05D001777 2.2e-25 118.6 58 98.3
A06p23660 Brassica napus HOM05D006450 ORTHO05D001777 2.2e-25 118.6 58 98.3
A06p24320 Brassica napus HOM05D006450 ORTHO05D001777 6.4e-25 117.1 58 96.6
A06p24630 Brassica napus HOM05D006450 ORTHO05D001777 6.4e-25 117.1 75 80.0
A06p25330 Brassica napus HOM05D006450 ORTHO05D001777 6.4e-25 117.1 58 98.3
A06p23730 Brassica napus HOM05D006450 ORTHO05D001777 8.4e-25 116.7 58 96.6
A09p30950 Brassica napus HOM05D006450 ORTHO05D001777 8.4e-25 116.7 58 96.6
A06p23850 Brassica napus HOM05D006450 ORTHO05D001777 1.1e-24 116.3 58 96.6
RhsimUnG0208400 Rhododendron simsii HOM05D000099 ORTHO05D000205 1.4e-24 115.9 67 86.6
A05p22240 Brassica napus HOM05D006450 ORTHO05D001777 1.9e-24 115.5 58 94.8
A06p25420 Brassica napus HOM05D006450 ORTHO05D001777 2.4e-24 115.2 58 96.6
A06p24890 Brassica napus HOM05D006450 ORTHO05D001777 9.3e-24 113.2 58 94.8
A09p31040 Brassica napus HOM05D006450 ORTHO05D001777 1.6e-23 112.5 78 73.1
A05p22370 Brassica napus HOM05D006450 ORTHO05D001777 2.1e-23 112.1 58 93.1
A06p24400 Brassica napus HOM05D006450 ORTHO05D001777 2.1e-23 112.1 58 93.1
A07p06160 Brassica napus HOM05D006450 ORTHO05D001777 2.1e-23 112.1 58 93.1
A06p24560 Brassica napus HOM05D006450 ORTHO05D001777 1.0e-22 109.8 58 94.8
A06p24330 Brassica napus HOM05D006450 ORTHO05D001777 3.0e-22 108.2 56 92.9
Sc14g0003720 Simmondsia chinensis HOM05D013320 ORTHO05D387512 3.0e-22 108.2 53 96.2
arahy.Tifrunner.gnm1.ann1.JLZP6T Arachis hypogaea HOM05D006450 ORTHO05D001777 8.7e-22 106.7 85 68.2
arahy.Tifrunner.gnm1.ann1.4EJ54G Arachis hypogaea HOM05D006450 ORTHO05D001777 1.5e-21 105.9 59 89.8
arahy.Tifrunner.gnm1.ann1.59N28G Arachis hypogaea HOM05D006450 ORTHO05D007849 1.5e-21 105.9 59 89.8
arahy.Tifrunner.gnm1.ann1.CY7VGA Arachis hypogaea HOM05D006450 ORTHO05D001777 1.5e-21 105.9 59 89.8
arahy.Tifrunner.gnm1.ann1.DW5R15 Arachis hypogaea HOM05D006450 ORTHO05D007849 1.5e-21 105.9 59 89.8
arahy.Tifrunner.gnm1.ann1.FM2NH1 Arachis hypogaea HOM05D006450 ORTHO05D001777 1.5e-21 105.9 59 89.8
arahy.Tifrunner.gnm1.ann1.N4E4FQ Arachis hypogaea HOM05D006450 ORTHO05D001777 1.5e-21 105.9 59 89.8
arahy.Tifrunner.gnm1.ann1.U7NBP2 Arachis hypogaea HOM05D006450 ORTHO05D001777 1.5e-21 105.9 59 89.8
arahy.Tifrunner.gnm1.ann1.Y3V93U Arachis hypogaea HOM05D006450 ORTHO05D001777 1.5e-21 105.9 59 89.8
Lj5g0003833 Lotus japonicus HOM05D007851 ORTHO05D007849 1.5e-21 105.9 91 64.8
LjContig00547g0007783 Lotus japonicus HOM05D007851 ORTHO05D007849 1.5e-21 105.9 82 70.7
arahy.Tifrunner.gnm1.ann1.XK9GFX Arachis hypogaea HOM05D006450 ORTHO05D001777 3.3e-21 104.8 59 88.1
CAN.G13509.1 Capsicum annuum HOM05D007851 ORTHO05D007849 3.3e-21 104.8 61 83.6
arahy.Tifrunner.gnm1.ann1.W08C9D Arachis hypogaea HOM05D006450 ORTHO05D001777 4.3e-21 104.4 78 69.2
arahy.Tifrunner.gnm1.ann1.PJI1IR Arachis hypogaea HOM05D006450 ORTHO05D001777 7.4e-21 103.6 59 88.1
A06p24520 Brassica napus HOM05D006450 ORTHO05D001777 7.4e-21 103.6 57 91.2
arahy.Tifrunner.gnm1.ann1.IKKG03 Arachis hypogaea HOM05D006450 ORTHO05D001777 9.6e-21 103.2 59 88.1
arahy.Tifrunner.gnm1.ann1.DBUY86 Arachis hypogaea HOM05D006450 ORTHO05D001777 2.1e-20 102.1 59 86.4
arahy.Tifrunner.gnm1.ann1.GBJ0Q2 Arachis hypogaea HOM05D006450 ORTHO05D001777 2.1e-20 102.1 59 88.1
arahy.Tifrunner.gnm1.ann1.M1SIGC Arachis hypogaea HOM05D006450 ORTHO05D001777 2.1e-20 102.1 79 72.2
arahy.Tifrunner.gnm1.ann1.Y74ICM Arachis hypogaea HOM05D006450 ORTHO05D001777 2.1e-20 102.1 59 88.1
unitig_579.g34820 Utricularia gibba HOM05D007851 ORTHO05D007849 2.1e-20 102.1 75 72.0
unitig_587.g34769 Utricularia gibba HOM05D007851 ORTHO05D007849 2.1e-20 102.1 75 72.0
unitig_644.g34716 Utricularia gibba HOM05D006450 ORTHO05D001777 2.1e-20 102.1 75 72.0
unitig_124.g30877 Utricularia gibba HOM05D006450 ORTHO05D001777 3.7e-20 101.3 64 79.7
unitig_245.g35376 Utricularia gibba HOM05D006450 ORTHO05D007849 3.7e-20 101.3 64 79.7
unitig_668.g29656 Utricularia gibba HOM05D006450 ORTHO05D001777 3.7e-20 101.3 64 79.7
unitig_807.g34415 Utricularia gibba HOM05D006450 ORTHO05D001777 3.7e-20 101.3 64 79.7
Duzib093G1336 Durio zibethinus HOM05D006450 ORTHO05D001777 1.4e-19 99.4 83 65.1
arahy.Tifrunner.gnm1.ann1.VCF5QC Arachis hypogaea HOM05D000099 ORTHO05D000205 2.4e-19 98.6 55 90.9
unitig_836.g33490 Utricularia gibba HOM05D011479 ORTHO05D007849 2.4e-19 98.6 75 72.0
unitig_96.g33467 Utricularia gibba HOM05D011479 ORTHO05D007849 2.4e-19 98.6 75 72.0
Medtr0055s0050 Medicago truncatula HOM05D000099 ORTHO05D000205 4.0e-19 97.8 67 73.1
BNapus_Darmor_BZH_scaffold_107p00250 Brassica napus HOM05D006450 ORTHO05D001777 5.3e-19 97.4 78 70.5
Cpa.g.sc121.11 Carica papaya HOM05D006450 ORTHO05D001777 5.3e-19 97.4 81 65.4
unitig_813.g34363 Utricularia gibba HOM05D006450 ORTHO05D001777 6.9e-19 97.1 83 65.1
Medtr0055s0140 Medicago truncatula HOM05D000099 ORTHO05D000205 3.4e-18 94.7 63 74.6
Duzib093G0876 Durio zibethinus HOM05D006450 ORTHO05D001777 5.8e-18 94.0 55 83.6
unitig_8.g4071 Utricularia gibba HOM05D006450 ORTHO05D001777 5.8e-18 94.0 76 67.1
BNapus_Darmor_BZH_scaffold_181p00010 Brassica napus HOM05D006450 ORTHO05D001777 7.6e-18 93.6 52 86.5
A06p23820 Brassica napus HOM05D006450 ORTHO05D001777 3.8e-17 91.3 61 77.0
Sed0026508 Sechium edule HOM05D003742 ORTHO05D001777 4.9e-17 90.9 44 95.5
LjContig00098g0020910 Lotus japonicus HOM05D000099 ORTHO05D000205 1.1e-16 89.7 68 67.6
arahy.Tifrunner.gnm1.ann1.FM8SZR Arachis hypogaea HOM05D006450 ORTHO05D001777 7.1e-16 87.0 57 73.7
arahy.Tifrunner.gnm1.ann1.HX86U3 Arachis hypogaea HOM05D006450 ORTHO05D001777 7.1e-16 87.0 67 71.6
LjContig00371g0016194 Lotus japonicus HOM05D000099 ORTHO05D000205 1.6e-15 85.9 41 97.6
LjContig00372g0003179 Lotus japonicus HOM05D006450 ORTHO05D001777 1.6e-15 85.9 41 97.6
LjContig00479g0011945 Lotus japonicus HOM05D006450 ORTHO05D001777 1.6e-15 85.9 41 97.6
LjContig00006g0004286 Lotus japonicus HOM05D006450 ORTHO05D001777 3.5e-15 84.7 46 87.0
unitig_102.g31719 Utricularia gibba HOM05D006450 ORTHO05D001777 1.0e-14 83.2 40 95.0
Duzib093G0575 Durio zibethinus HOM05D006450 ORTHO05D001777 1.3e-14 82.8 55 72.7
Medtr0052s0090 Medicago truncatula HOM05D006450 ORTHO05D001777 1.3e-14 82.8 39 97.4
Nn061s42067 Nelumbo nucifera HOM05D006450 ORTHO05D001777 3.9e-14 81.3 40 95.0
Nn069s42367 Nelumbo nucifera HOM05D006450 ORTHO05D001777 3.9e-14 81.3 40 95.0
Nn098s43115 Nelumbo nucifera HOM05D006450 ORTHO05D001777 3.9e-14 81.3 40 95.0
Nn119s43472 Nelumbo nucifera HOM05D006450 ORTHO05D001777 3.9e-14 81.3 40 95.0
Nn139s43902 Nelumbo nucifera HOM05D006450 ORTHO05D001777 3.9e-14 81.3 40 95.0
Nn185s44669 Nelumbo nucifera HOM05D006450 ORTHO05D001777 3.9e-14 81.3 40 95.0
Nn208s45111 Nelumbo nucifera HOM05D006450 ORTHO05D001777 3.9e-14 81.3 40 95.0
Nn227s45449 Nelumbo nucifera HOM05D006450 ORTHO05D001777 3.9e-14 81.3 40 95.0
Nn247s45810 Nelumbo nucifera HOM05D006450 ORTHO05D001777 3.9e-14 81.3 40 95.0
Nn273s46056 Nelumbo nucifera HOM05D006450 ORTHO05D001777 3.9e-14 81.3 40 95.0
Nn5g28945 Nelumbo nucifera HOM05D006450 ORTHO05D001777 3.9e-14 81.3 40 95.0
Rhsim05G0123400 Rhododendron simsii HOM05D006450 ORTHO05D018518 1.6e-12 75.9 44 86.4
Dinv01605 Davidia involucrata HOM05D000099 ORTHO05D000205 2.1e-12 75.5 74 59.5
BNapus_Darmor_BZH_scaffold_107p00040 Brassica napus HOM05D000099 ORTHO05D000205 6.2e-12 73.9 60 66.7
A06p25060 Brassica napus HOM05D000099 ORTHO05D000205 8.2e-12 73.6 60 65.0
Duzib147G1173 Durio zibethinus HOM05D000099 ORTHO05D000205 8.2e-12 73.6 53 66.0
unitig_813.g34373 Utricularia gibba HOM05D000099 ORTHO05D002059 1.4e-11 72.8 60 65.0
A05p22460 Brassica napus HOM05D006450 ORTHO05D001777 1.8e-11 72.4 34 100.0
A05p22630 Brassica napus HOM05D000099 ORTHO05D000205 3.1e-11 71.6 60 65.0
Duzib250G0002 Durio zibethinus HOM05D000099 ORTHO05D000205 4.0e-11 71.2 36 97.2
BcaNung05352 Brassica carinata HOM05D006450 ORTHO05D001777 9.0e-11 70.1 61 62.3
A06p25830 Brassica napus HOM05D000099 ORTHO05D000205 1.5e-10 69.3 58 65.5
Medtr0152s0090 Medicago truncatula HOM05D000099 ORTHO05D000205 1.5e-10 69.3 70 55.7
BNapus_Darmor_BZH_scaffold_107p00350 Brassica napus HOM05D006450 ORTHO05D101430 2.6e-10 68.6 43 79.1
Mapoly0011s0192 Marchantia polymorpha HOM05D006450 ORTHO05D001777 1.0e-09 66.6 44 72.7
Lj2g0016942 Lotus japonicus HOM05D000099 ORTHO05D000205 1.7e-09 65.9 37 83.8
Medtr0152s0120 Medicago truncatula HOM05D000099 ORTHO05D000205 3.8e-09 64.7 34 82.4
BNapus_Darmor_BZH_scaffold_268p00020 Brassica napus HOM05D006450 ORTHO05D001777 1.1e-08 63.2 30 100.0
SHI27865 Sapria himalayana HOM05D000099 ORTHO05D000205 5.5e-08 60.8 48 64.6
SHI35529 Sapria himalayana HOM05D000099 ORTHO05D000205 9.3e-08 60.1 33 84.8
SHI35534 Sapria himalayana HOM05D000099 ORTHO05D000205 9.3e-08 60.1 33 84.8
SHI35537 Sapria himalayana HOM05D000099 ORTHO05D000205 9.3e-08 60.1 33 84.8
SHI38617 Sapria himalayana HOM05D000099 ORTHO05D000205 9.3e-08 60.1 33 84.8
SHI38620 Sapria himalayana HOM05D000099 ORTHO05D000205 9.3e-08 60.1 33 84.8
SHI39807 Sapria himalayana HOM05D000099 ORTHO05D000205 9.3e-08 60.1 33 84.8
SHI39842 Sapria himalayana HOM05D000099 ORTHO05D000205 9.3e-08 60.1 33 84.8
SHI41311 Sapria himalayana HOM05D000099 ORTHO05D000205 9.3e-08 60.1 33 84.8
CAN.G1991.2 Capsicum annuum HOM05D000099 ORTHO05D000205 1.6e-07 59.3 34 82.4
Lj2g0005038 Lotus japonicus HOM05D000099 ORTHO05D000205 2.1e-07 58.9 29 89.7
Lalb_Chr01g0023261 Lupinus albus HOM05D007653 ORTHO05D009670 2.1e-07 58.9 50 50.0
A06p24770 Brassica napus HOM05D006450 ORTHO05D001777 4.6e-07 57.8 36 83.3
SHI17753 Sapria himalayana HOM05D000099 ORTHO05D000205 6.1e-07 57.4 48 60.4
Sopen07g009520 Solanum pennellii HOM05D000099 ORTHO05D000205 1.8e-06 55.8 61 52.5
arahy.Tifrunner.gnm1.ann1.6AY1PL Arachis hypogaea HOM05D000099 ORTHO05D000205 2.3e-06 55.5 51 60.8
DCAR_032322 Daucus carota HOM05D006450 ORTHO05D001777 3.9e-06 54.7 41 70.7
Sopen00g002280 Solanum pennellii HOM05D000099 ORTHO05D000205 3.9e-06 54.7 33 78.8
A06p25260 Brassica napus HOM05D006450 ORTHO05D001777 8.7e-06 53.5 59 57.6


User provided reference genes

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