Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p29790 Brassica napus HOM05D004580 ORTHO05D005917 1.3e-125 453.0 217 100.0
BraA09t38542Z Brassica rapa HOM05D004580 ORTHO05D005917 9.7e-121 436.8 208 99.5
BcaC04g20934 Brassica carinata HOM05D004580 ORTHO05D005917 5.0e-101 371.3 186 94.6
C09p37760 Brassica napus HOM05D004580 ORTHO05D005917 5.0e-101 371.3 186 94.6
BolC9t56609H Brassica oleracea HOM05D004580 ORTHO05D005917 5.0e-101 371.3 186 94.6
BcaB01g02823 Brassica carinata HOM05D004580 ORTHO05D005917 2.3e-98 362.5 186 90.9
BcaB01g02835 Brassica carinata HOM05D004580 ORTHO05D005917 1.5e-97 359.8 186 89.8
BcaB01g02381 Brassica carinata HOM05D004580 ORTHO05D005917 2.3e-93 345.9 177 91.5
Sp6g08660 Schrenkiella parvula HOM05D004580 ORTHO05D005917 2.9e-93 345.5 177 91.5
Aa31LG9G14650 Aethionema arabicum HOM05D004580 ORTHO05D005917 5.0e-93 344.7 177 92.7
AT4G08960 Arabidopsis thaliana HOM05D004580 ORTHO05D005917 1.1e-92 343.6 177 90.4
ClCG08G011200 Citrullus lanatus HOM05D004580 ORTHO05D005917 1.1e-92 343.6 189 85.7
AL6G41550 Arabidopsis lyrata HOM05D004580 ORTHO05D005917 1.5e-92 343.2 177 90.4
Carub.0006s2756 Capsella rubella HOM05D004580 ORTHO05D005917 1.9e-92 342.8 177 90.4
BcaC01g04745 Brassica carinata HOM05D004580 ORTHO05D005917 9.5e-92 340.5 177 90.4
CARHR259970 Cardamine hirsuta HOM05D004580 ORTHO05D005917 2.8e-91 339.0 177 89.8
C03p34240 Brassica napus HOM05D004580 ORTHO05D005917 1.4e-90 336.7 176 90.3
BolC3t15733H Brassica oleracea HOM05D004580 ORTHO05D005917 1.4e-90 336.7 176 90.3
Gohir.A06G034900 Gossypium hirsutum HOM05D004580 ORTHO05D005917 1.4e-90 336.7 177 88.7
Gohir.D06G035500 Gossypium hirsutum HOM05D004580 ORTHO05D005917 1.4e-90 336.7 177 88.7
Gorai.010G039500 Gossypium raimondii HOM05D004580 ORTHO05D005917 1.4e-90 336.7 177 88.7
THA.LOC104813113 Tarenaya hassleriana HOM05D004580 ORTHO05D005917 1.8e-90 336.3 177 90.4
Thecc.08G104300 Theobroma cacao HOM05D004580 ORTHO05D005917 3.0e-90 335.5 177 88.1
A03p28330 Brassica napus HOM05D004580 ORTHO05D005917 6.8e-90 334.3 176 89.8
MELO3C011036.2 Cucumis melo HOM05D004580 ORTHO05D005917 6.8e-90 334.3 177 88.7
Duzib093G0091 Durio zibethinus HOM05D004580 ORTHO05D005917 6.8e-90 334.3 177 88.1
Atru.chr13.1137 Acer truncatum HOM05D004580 ORTHO05D005917 8.9e-90 334.0 177 87.0
CsaV3_2G029780 Cucumis sativus L. HOM05D004580 ORTHO05D005917 1.2e-89 333.6 177 88.7
BraA03t12037Z Brassica rapa HOM05D004580 ORTHO05D005917 1.5e-89 333.2 176 89.8
Cpa.g.sc36.160 Carica papaya HOM05D004580 ORTHO05D005917 1.5e-89 333.2 179 86.0
Thhalv10028722m.g Eutrema salsugineum HOM05D004580 ORTHO05D005917 2.6e-89 332.4 178 89.3
Manes.18G065933 Manihot esculenta HOM05D004580 ORTHO05D005917 2.6e-89 332.4 177 87.0
CSS0036827 Camellia sinensis var. sinensis HOM05D004580 ORTHO05D005917 3.4e-89 332.0 183 83.6
Hma1.2p1_0044F.1_g026170 Hydrangea macrophylla HOM05D004580 ORTHO05D005917 3.4e-89 332.0 178 87.6
Haze_22292 Corylus avellana HOM05D004580 ORTHO05D005917 4.4e-89 331.6 178 86.0
PGR031G1028 Punica granatum HOM05D004580 ORTHO05D005917 4.4e-89 331.6 206 77.2
QL12p037342 Quercus lobata HOM05D004580 ORTHO05D005917 4.4e-89 331.6 177 86.4
COL.COLO4_12032 Corchorus olitorius HOM05D004580 ORTHO05D005917 7.5e-89 330.9 177 87.6
CSS0039091 Camellia sinensis var. sinensis HOM05D004580 ORTHO05D005917 9.8e-89 330.5 177 85.9
FAN02G1810 Fragaria x ananassa HOM05D004580 ORTHO05D005917 1.3e-88 330.1 179 86.0
Lsat_1_v5_gn_4_64561 Lactuca sativa HOM05D004580 ORTHO05D005917 2.2e-88 329.3 177 88.1
Sed0021368 Sechium edule HOM05D004580 ORTHO05D005917 2.2e-88 329.3 177 85.9
TAR625G1360 Trochodendron aralioides HOM05D004580 ORTHO05D005917 2.2e-88 329.3 177 86.4
Cfa013658 Carpinus fangiana HOM05D004580 ORTHO05D005917 2.9e-88 328.9 177 85.9
Duzib041G0230 Durio zibethinus HOM05D004580 ORTHO05D005917 2.9e-88 328.9 177 87.0
MD08G1227100 Malus domestica HOM05D004580 ORTHO05D005917 2.9e-88 328.9 179 84.9
Ciclev10001487m.g Citrus clementina HOM05D004580 ORTHO05D005917 3.7e-88 328.6 177 86.4
RcHm_v2.0_Chr7g0243401 Rosa chinensis HOM05D004580 ORTHO05D005917 3.7e-88 328.6 177 88.1
Gohir.D05G227500 Gossypium hirsutum HOM05D004580 ORTHO05D005917 6.4e-88 327.8 176 86.9
TWI12G1022 Tripterygium wilfordii HOM05D004580 ORTHO05D005917 8.3e-88 327.4 206 76.2
FvH4_6g23990 Fragaria vesca HOM05D004580 ORTHO05D005917 1.8e-87 326.2 177 86.4
FAN14G1039 Fragaria x ananassa HOM05D004580 ORTHO05D005917 1.8e-87 326.2 177 86.4
CSS0011251 Camellia sinensis var. sinensis HOM05D004580 ORTHO05D005917 2.4e-87 325.9 177 84.2
Eucgr.B00032 Eucalyptus grandis HOM05D004580 ORTHO05D005917 3.2e-87 325.5 177 85.3
Nn5g30036 Nelumbo nucifera HOM05D004580 ORTHO05D005917 5.4e-87 324.7 185 81.6
Lj3P847T35 Lonicera japonica HOM05D004580 ORTHO05D005917 7.0e-87 324.3 185 83.2
Actinidia04333 Actinidia chinensis HOM05D004580 ORTHO05D005917 9.2e-87 323.9 177 83.1
FAN05G1019 Fragaria x ananassa HOM05D004580 ORTHO05D005917 9.2e-87 323.9 177 85.3
Gorai.009G235200 Gossypium raimondii HOM05D004580 ORTHO05D005917 1.2e-86 323.6 176 85.8
RcHm_v2.0_Chr1g0321971 Rosa chinensis HOM05D004580 ORTHO05D005917 1.2e-86 323.6 177 86.4
Dinv17643 Davidia involucrata HOM05D004580 ORTHO05D005917 1.6e-86 323.2 177 85.3
Oeu036766.1 Olea europaea HOM05D004580 ORTHO05D005917 1.6e-86 323.2 187 80.7
Sed0008659 Sechium edule HOM05D004580 ORTHO05D005917 1.6e-86 323.2 177 83.1
Aqoxy7G04111 Aquilegia oxysepala HOM05D004580 ORTHO05D005917 3.5e-86 322.0 177 84.7
Medtr4g053370 Medicago truncatula HOM05D004580 ORTHO05D005917 4.6e-86 321.6 177 85.3
Prupe.1G521000 Prunus persica HOM05D004580 ORTHO05D005917 7.8e-86 320.9 177 84.7
TAR381G0740 Trochodendron aralioides HOM05D004580 ORTHO05D005917 1.0e-85 320.5 206 73.8
Phvul.011G102600 Phaseolus vulgaris HOM05D004580 ORTHO05D005917 1.3e-85 320.1 177 83.1
VMungo1127G0933 Vigna mungo HOM05D004580 ORTHO05D005917 1.7e-85 319.7 178 82.0
MSTRG.2066 Avicennia marina HOM05D004580 ORTHO05D005917 2.3e-85 319.3 179 81.0
CsaV3_3G047600 Cucumis sativus L. HOM05D004580 ORTHO05D005917 2.3e-85 319.3 177 83.1
Sabra05G0123100 Salix brachista HOM05D004580 ORTHO05D005917 2.3e-85 319.3 178 84.3
FvH4_5g29380 Fragaria vesca HOM05D004580 ORTHO05D005917 3.0e-85 318.9 176 85.8
Nn5g30292 Nelumbo nucifera HOM05D004580 ORTHO05D005917 3.0e-85 318.9 177 83.6
ATR0706G027 Amborella trichopoda HOM05D004580 ORTHO05D005917 5.0e-85 318.2 177 83.1
AUR62017729 Chenopodium quinoa HOM05D004580 ORTHO05D005917 5.0e-85 318.2 179 80.4
Ca_19393_v3 Cicer arietinum L. HOM05D004580 ORTHO05D005917 5.0e-85 318.2 176 85.2
ClCG11G014220 Citrullus lanatus HOM05D004580 ORTHO05D005917 5.0e-85 318.2 177 83.1
Lj3g0026440 Lotus japonicus HOM05D004580 ORTHO05D005917 5.0e-85 318.2 176 83.5
arahy.Tifrunner.gnm1.ann1.UE4JHM Arachis hypogaea HOM05D004580 ORTHO05D005917 8.6e-85 317.4 177 83.1
CiPaw.07G178200 Carya illinoinensis HOM05D004580 ORTHO05D005917 8.6e-85 317.4 177 84.7
Glyma.11G184601 Glycine max HOM05D004580 ORTHO05D005917 1.1e-84 317.0 177 82.5
Ah.01g012710 Amaranthus hybridus HOM05D004580 ORTHO05D005917 1.9e-84 316.2 178 80.3
MELO3C003564.2 Cucumis melo HOM05D004580 ORTHO05D005917 1.9e-84 316.2 176 83.5
ECA236G1081 Erigeron canadensis HOM05D004580 ORTHO05D005917 1.9e-84 316.2 178 84.3
DCAR_023183 Daucus carota HOM05D004580 ORTHO05D005917 3.3e-84 315.5 177 83.1
MSTRG.13678 Avicennia marina HOM05D004580 ORTHO05D005917 4.3e-84 315.1 179 80.4
MD15G1419400 Malus domestica HOM05D004580 ORTHO05D005917 4.3e-84 315.1 177 83.6
CANSAT25G2089 Cannabis sativa HOM05D004580 ORTHO05D005917 5.6e-84 314.7 177 82.5
Glyma.12G087751 Glycine max HOM05D004580 ORTHO05D005917 5.6e-84 314.7 178 82.6
Potri.005G162900 Populus trichocarpa HOM05D004580 ORTHO05D005917 5.6e-84 314.7 177 84.2
Sc10g0006870 Simmondsia chinensis HOM05D004580 ORTHO05D005917 5.6e-84 314.7 177 81.4
CDE05G3003 Ceratophyllum demersum HOM05D004580 ORTHO05D005917 7.3e-84 314.3 177 80.8
Nitab4.5_0000069g0120 Nicotiana tabacum HOM05D004580 ORTHO05D005917 7.3e-84 314.3 176 81.2
Migut.E00684 Erythranthe guttata HOM05D004580 ORTHO05D005917 9.5e-84 313.9 179 79.3
Psat7g188520 Pisum sativum HOM05D004580 ORTHO05D005917 9.5e-84 313.9 177 81.9
Potri.002G099000 Populus trichocarpa HOM05D004580 ORTHO05D005917 9.5e-84 313.9 183 79.8
arahy.Tifrunner.gnm1.ann1.T3Z839 Arachis hypogaea HOM05D004580 ORTHO05D005917 1.2e-83 313.5 176 83.0
Nitab4.5_0013217g0010 Nicotiana tabacum HOM05D004580 ORTHO05D005917 1.2e-83 313.5 176 81.2
SGA_v2.0_scaffold358G49840 Striga asiatica HOM05D004580 ORTHO05D005917 1.6e-83 313.2 177 80.8
DCAR_002598 Daucus carota HOM05D004580 ORTHO05D005917 2.1e-83 312.8 177 81.9
HanXRQChr04g0124871 Helianthus annuus HOM05D004580 ORTHO05D005917 2.1e-83 312.8 177 80.8
PGSC0003DMG402016396 Solanum tuberosum HOM05D004580 ORTHO05D005917 8.0e-83 310.8 177 79.1
MBI05_g34722_MAGBIO Magnolia biondii HOM05D004580 ORTHO05D005917 1.0e-82 310.5 177 79.7
EL10Ac9g22979 Beta vulgaris HOM05D004580 ORTHO05D005917 2.3e-82 309.3 177 79.7
Rhsim09G0069400 Rhododendron simsii HOM05D004580 ORTHO05D005917 3.1e-82 308.9 190 75.8
Sopen01g003800 Solanum pennellii HOM05D004580 ORTHO05D005917 6.8e-82 307.8 177 79.1
unitig_8.g3592 Utricularia gibba HOM05D004580 ORTHO05D005917 6.8e-82 307.8 179 78.8
Solyc01g008280.4 Solanum lycopersicum HOM05D004580 ORTHO05D005917 8.9e-82 307.4 177 79.1
MBI02_g02175_MAGBIO Magnolia biondii HOM05D004580 ORTHO05D005917 1.2e-81 307.0 179 81.0
vmacro15988 Vaccinium macrocarpon HOM05D004580 ORTHO05D005917 2.0e-81 306.2 177 79.1
PSO541G6503 Papaver somniferum HOM05D004580 ORTHO05D005917 2.6e-81 305.8 177 80.2
Sabra02G0077800 Salix brachista HOM05D004580 ORTHO05D005917 2.2e-80 302.8 178 81.5
PSO781G0322 Papaver somniferum HOM05D004580 ORTHO05D005917 2.9e-80 302.4 177 77.4
HPP92_004278 Vanilla planifolia HOM05D004580 ORTHO05D005917 2.9e-80 302.4 178 80.3
Hund08631 Selenicereus undatus HOM05D004580 ORTHO05D005917 3.7e-80 302.0 179 76.5
SEGI_24357 Sequoiadendron giganteum HOM05D004580 ORTHO05D005917 1.4e-79 300.1 177 76.8
Os06g0219800 Oryza sativa ssp. japonica HOM05D004580 ORTHO05D005917 1.9e-79 299.7 179 78.8
Zm00001eb372770 Zea mays HOM05D004580 ORTHO05D005917 1.2e-78 297.0 179 78.8
Gohir.A05G224950 Gossypium hirsutum HOM05D004580 ORTHO05D005917 1.6e-78 296.6 176 80.7
Lalb_Chr03g0028011 Lupinus albus HOM05D004580 ORTHO05D005917 3.5e-78 295.4 177 77.4
Peaxi162Scf00021g02317 Petunia axillaris HOM05D004580 ORTHO05D005917 4.6e-78 295.0 164 81.7
PSO541G6453 Papaver somniferum HOM05D004580 ORTHO05D005917 5.0e-77 291.6 176 76.7
Pp3c2_670 Physcomitrium patens HOM05D004580 ORTHO05D005917 1.1e-76 290.4 177 75.7
Pp3c1_41950 Physcomitrium patens HOM05D004580 ORTHO05D005917 2.8e-75 285.8 177 74.6
AagrBONN_evm.TU.Sc2ySwM_117.2526 Anthoceros agrestis HOM05D004580 ORTHO05D005917 6.2e-75 284.6 177 73.4
Mapoly0004s0171 Marchantia polymorpha HOM05D004580 ORTHO05D005917 8.1e-75 284.3 179 73.2
GSVIVG01009068001 Vitis vinifera HOM05D004580 ORTHO05D005917 4.4e-73 278.5 177 75.7
SHI33348 Sapria himalayana HOM05D004580 ORTHO05D005917 2.9e-72 275.8 177 73.4
HPP92_016361 Vanilla planifolia HOM05D004580 ORTHO05D005917 2.9e-72 275.8 163 78.5
SMO329G0013 Selaginella moellendorffii HOM05D004580 ORTHO05D005917 3.5e-70 268.9 175 69.7
CAN.G282.45 Capsicum annuum HOM05D004580 ORTHO05D005917 1.0e-69 267.3 162 74.7
Nn1g05417 Nelumbo nucifera HOM05D004580 ORTHO05D005917 1.6e-67 260.0 142 84.5
CBR_g45439 Chara braunii HOM05D004580 ORTHO05D005917 1.5e-65 253.4 177 66.7
TPR.G17228 Trifolium pratense HOM05D004580 ORTHO05D005917 5.4e-63 245.0 138 83.3
Cre13.g580650 Chlamydomonas reinhardtii HOM05D004580 ORTHO05D005917 6.9e-58 228.0 175 62.3
FAN18G2046 Fragaria x ananassa HOM05D004580 ORTHO05D005917 3.9e-53 212.2 121 84.3
MCO01G633 Micromonas commoda HOM05D004580 ORTHO05D005917 1.4e-50 203.8 176 55.7
PRCOL_00005481 Prasinoderma coloniale HOM05D004580 ORTHO05D005917 1.4e-50 203.8 179 52.5
FAN24G1342 Fragaria x ananassa HOM05D004580 ORTHO05D005917 2.2e-48 196.4 176 58.5
GSVIVG01009057001 Vitis vinifera HOM05D004580 ORTHO05D005917 3.3e-44 182.6 138 67.4
Lalb_Chr19g0136591 Lupinus albus HOM05D004580 ORTHO05D005917 2.4e-42 176.4 177 52.5
FvH4_2g11953 Fragaria vesca HOM05D004580 ORTHO05D000007 4.5e-41 172.2 168 54.8
Cfa021829 Carpinus fangiana HOM05D004580 ORTHO05D011646 7.6e-41 171.4 179 46.4
SEGI_19435 Sequoiadendron giganteum HOM05D004580 ORTHO05D005917 1.1e-34 151.0 89 76.4
Cfa001645 Carpinus fangiana HOM05D004580 ORTHO05D020348 4.0e-34 149.1 195 41.5
FAN24G1075 Fragaria x ananassa HOM05D004580 ORTHO05D005917 6.5e-32 141.7 149 51.7
Nn3g16512 Nelumbo nucifera HOM05D004580 ORTHO05D005917 1.6e-22 110.5 64 76.6
Aqoxy6G00748 Aquilegia oxysepala HOM05D004580 ORTHO05D005917 2.8e-19 99.8 52 86.5
FvH4_4g06652 Fragaria vesca HOM05D004580 ORTHO05D000031 1.1e-18 97.8 58 77.6
CDE05G0498 Ceratophyllum demersum HOM05D004580 ORTHO05D005917 3.1e-10 69.7 42 66.7


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