Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p27170 Brassica napus HOM05D004703 ORTHO05D005801 1.6e-149 532.7 269 100.0
BcaC04g21182 Brassica carinata HOM05D004703 ORTHO05D005801 2.1e-120 436.0 264 84.8
C09p34490 Brassica napus HOM05D004703 ORTHO05D005801 2.1e-120 436.0 264 84.8
BolC9t56293H Brassica oleracea HOM05D004703 ORTHO05D005801 2.1e-120 436.0 264 84.8
BcaB01g01695 Brassica carinata HOM05D004703 ORTHO05D005801 2.3e-119 432.6 264 84.8
Thhalv10028825m.g Eutrema salsugineum HOM05D004703 ORTHO05D005801 2.0e-115 419.5 265 81.9
AL6G46750 Arabidopsis lyrata HOM05D004703 ORTHO05D005801 4.1e-113 411.8 265 80.8
CARHR254310 Cardamine hirsuta HOM05D004703 ORTHO05D005801 2.1e-112 409.5 262 80.2
AT4G11980 Arabidopsis thaliana HOM05D004703 ORTHO05D005801 2.7e-112 409.1 261 81.2
Carub.0006s3108 Capsella rubella HOM05D004703 ORTHO05D005801 1.3e-111 406.8 262 79.4
THA.LOC104806355 Tarenaya hassleriana HOM05D004703 ORTHO05D005801 7.8e-104 380.9 266 74.4
Atru.chr9.1491 Acer truncatum HOM05D004703 ORTHO05D005801 2.9e-98 362.5 262 71.4
COL.COLO4_23815 Corchorus olitorius HOM05D004703 ORTHO05D005801 9.3e-97 357.5 262 70.2
Lj4g0003091 Lotus japonicus HOM05D004703 ORTHO05D005801 4.6e-96 355.1 262 67.9
Haze_09002 Corylus avellana HOM05D004703 ORTHO05D005801 6.0e-96 354.8 260 69.6
Lalb_Chr05g0225211 Lupinus albus HOM05D004703 ORTHO05D005801 6.0e-96 354.8 261 68.2
arahy.Tifrunner.gnm1.ann1.RRY62Q Arachis hypogaea HOM05D004703 ORTHO05D005801 1.8e-95 353.2 261 69.3
TAR629G2760 Trochodendron aralioides HOM05D004703 ORTHO05D005801 3.9e-95 352.1 264 68.9
PGR042G1634 Punica granatum HOM05D004703 ORTHO05D005801 6.7e-95 351.3 262 68.3
FvH4_5g01080 Fragaria vesca HOM05D004703 ORTHO05D005801 1.9e-94 349.7 262 67.2
PGSC0003DMG400003941 Solanum tuberosum HOM05D004703 ORTHO05D005801 2.5e-94 349.4 262 67.6
Eucgr.E00504 Eucalyptus grandis HOM05D004703 ORTHO05D005801 5.6e-94 348.2 263 68.1
RcHm_v2.0_Chr7g0200241 Rosa chinensis HOM05D004703 ORTHO05D005801 5.6e-94 348.2 262 67.2
FAN18G3460 Fragaria x ananassa HOM05D004703 ORTHO05D005801 7.4e-94 347.8 260 67.3
Potri.003G118300 Populus trichocarpa HOM05D004703 ORTHO05D005801 9.6e-94 347.4 263 68.8
TWI15G0205 Tripterygium wilfordii HOM05D004703 ORTHO05D005801 9.6e-94 347.4 262 67.9
Hma1.2p1_0138F.1_g062820 Hydrangea macrophylla HOM05D004703 ORTHO05D005801 1.3e-93 347.1 261 67.0
DCAR_006785 Daucus carota HOM05D004703 ORTHO05D005801 1.6e-93 346.7 262 66.4
Sopen08g028180 Solanum pennellii HOM05D004703 ORTHO05D005801 1.6e-93 346.7 261 67.4
VMungo0251G1252 Vigna mungo HOM05D004703 ORTHO05D005801 1.6e-93 346.7 261 66.7
Ciclev10021310m.g Citrus clementina HOM05D004703 ORTHO05D005801 2.8e-93 345.9 262 67.9
Sed0028019 Sechium edule HOM05D004703 ORTHO05D005801 2.8e-93 345.9 262 67.6
Thecc.03G266100 Theobroma cacao HOM05D004703 ORTHO05D005801 2.8e-93 345.9 262 67.6
FAN13G0401 Fragaria x ananassa HOM05D004703 ORTHO05D005801 3.6e-93 345.5 260 66.9
Migut.A00879 Erythranthe guttata HOM05D004703 ORTHO05D005801 4.8e-93 345.1 262 65.6
QL12p016126 Quercus lobata HOM05D004703 ORTHO05D005801 6.2e-93 344.7 264 67.0
QL12p016291 Quercus lobata HOM05D004703 ORTHO05D005801 6.2e-93 344.7 264 67.0
Solyc08g079820.3 Solanum lycopersicum HOM05D004703 ORTHO05D005801 8.1e-93 344.4 261 67.0
AUR62017343 Chenopodium quinoa HOM05D004703 ORTHO05D005801 1.1e-92 344.0 259 67.6
Cc08_g13610 Coffea canephora HOM05D004703 ORTHO05D005801 1.1e-92 344.0 262 66.0
AUR62010550 Chenopodium quinoa HOM05D004703 ORTHO05D005801 1.4e-92 343.6 261 67.0
CANSAT21G0478 Cannabis sativa HOM05D004703 ORTHO05D005801 1.8e-92 343.2 260 66.5
Psat4g069480 Pisum sativum HOM05D004703 ORTHO05D005801 1.8e-92 343.2 263 66.2
Ca_12294_v3 Cicer arietinum L. HOM05D004703 ORTHO05D005801 2.4e-92 342.8 261 67.0
Nitab4.5_0005167g0040 Nicotiana tabacum HOM05D004703 ORTHO05D005801 2.4e-92 342.8 262 66.0
Nitab4.5_0012494g0020 Nicotiana tabacum HOM05D004703 ORTHO05D005801 2.4e-92 342.8 262 66.0
CiPaw.11G143800 Carya illinoinensis HOM05D004703 ORTHO05D005801 4.0e-92 342.0 262 66.4
Oeu001909.1 Olea europaea HOM05D004703 ORTHO05D005801 5.3e-92 341.7 263 64.3
Gorai.006G210900 Gossypium raimondii HOM05D004703 ORTHO05D005801 6.9e-92 341.3 262 66.8
Manes.01G070700 Manihot esculenta HOM05D004703 ORTHO05D005801 9.0e-92 340.9 262 67.9
CsaV3_5G003450 Cucumis sativus L. HOM05D004703 ORTHO05D005801 1.2e-91 340.5 262 67.6
Dinv37721 Davidia involucrata HOM05D004703 ORTHO05D005801 1.2e-91 340.5 262 65.6
Gohir.D09G188100 Gossypium hirsutum HOM05D004703 ORTHO05D005801 1.2e-91 340.5 262 66.8
Prupe.5G084800 Prunus persica HOM05D004703 ORTHO05D005801 1.2e-91 340.5 262 66.4
Aa31LG9G10490 Aethionema arabicum HOM05D004703 ORTHO05D005801 1.5e-91 340.1 258 69.0
CAN.G630.24 Capsicum annuum HOM05D004703 ORTHO05D005801 1.5e-91 340.1 262 65.6
Actinidia14493 Actinidia chinensis HOM05D004703 ORTHO05D005801 2.0e-91 339.7 262 64.9
Gohir.A09G193900 Gossypium hirsutum HOM05D004703 ORTHO05D005801 2.6e-91 339.3 262 66.0
Phvul.003G216900 Phaseolus vulgaris HOM05D004703 ORTHO05D005801 2.6e-91 339.3 261 66.7
Sabra03G0082300 Salix brachista HOM05D004703 ORTHO05D005801 2.6e-91 339.3 263 68.1
Hund14696 Selenicereus undatus HOM05D004703 ORTHO05D005801 2.6e-91 339.3 262 66.4
Aqoxy7G00537 Aquilegia oxysepala HOM05D004703 ORTHO05D005801 3.4e-91 339.0 262 66.4
Duzib084G1157 Durio zibethinus HOM05D004703 ORTHO05D005801 3.4e-91 339.0 262 66.0
EL10Ac5g12672 Beta vulgaris HOM05D004703 ORTHO05D005801 4.5e-91 338.6 261 65.9
CSS0006775 Camellia sinensis var. sinensis HOM05D004703 ORTHO05D005801 4.5e-91 338.6 262 66.0
SGA_v2.0_scaffold37G14871 Striga asiatica HOM05D004703 ORTHO05D005801 4.5e-91 338.6 261 64.4
Ah.12g053460 Amaranthus hybridus HOM05D004703 ORTHO05D005801 9.9e-91 337.4 263 65.4
Ah.12g057950 Amaranthus hybridus HOM05D004703 ORTHO05D005801 9.9e-91 337.4 263 65.4
Medtr4g101830 Medicago truncatula HOM05D004703 ORTHO05D005801 1.3e-90 337.0 261 65.9
unitig_22.g5479 Utricularia gibba HOM05D004703 ORTHO05D005801 1.3e-90 337.0 260 64.2
CDE04G3458 Ceratophyllum demersum HOM05D004703 ORTHO05D005801 1.7e-90 336.7 262 64.5
Glyma.05G054900 Glycine max HOM05D004703 ORTHO05D005801 1.7e-90 336.7 260 66.5
Rhsim08G0184400 Rhododendron simsii HOM05D004703 ORTHO05D005801 2.2e-90 336.3 263 66.2
Glyma.05G054800 Glycine max HOM05D004703 ORTHO05D005801 4.9e-90 335.1 261 64.4
TPR.G37619 Trifolium pratense HOM05D004703 ORTHO05D005801 4.9e-90 335.1 261 65.1
GSVIVG01019903001 Vitis vinifera HOM05D004703 ORTHO05D005801 6.4e-90 334.7 262 65.3
HanXRQChr07g0186971 Helianthus annuus HOM05D004703 ORTHO05D005801 8.4e-90 334.3 263 63.5
MBI04_g28556_MAGBIO Magnolia biondii HOM05D004703 ORTHO05D005801 1.9e-89 333.2 261 64.8
Peaxi162Scf00620g00231 Petunia axillaris HOM05D004703 ORTHO05D005801 1.9e-89 333.2 288 61.1
MD04G1073000 Malus domestica HOM05D004703 ORTHO05D005801 2.4e-89 332.8 262 64.5
Lj2A203G54 Lonicera japonica HOM05D004703 ORTHO05D005801 7.1e-89 331.3 262 64.5
ECA233G5834 Erigeron canadensis HOM05D004703 ORTHO05D005801 1.2e-88 330.5 263 63.1
Lsat_1_v5_gn_6_10661 Lactuca sativa HOM05D004703 ORTHO05D005801 2.1e-88 329.7 262 62.6
Ah.02g116260 Amaranthus hybridus HOM05D004703 ORTHO05D005801 1.0e-87 327.4 262 62.2
CSS0042147 Camellia sinensis var. sinensis HOM05D004703 ORTHO05D005801 1.3e-87 327.0 262 64.1
Os06g0129700 Oryza sativa ssp. japonica HOM05D004703 ORTHO05D005801 3.3e-86 322.4 261 60.9
PSO478G3008 Papaver somniferum HOM05D004703 ORTHO05D005801 1.3e-85 320.5 263 61.2
PSO782G3959 Papaver somniferum HOM05D004703 ORTHO05D005801 1.3e-85 320.5 262 61.5
PSO478G3534 Papaver somniferum HOM05D004703 ORTHO05D005801 6.2e-85 318.2 262 60.7
ClCG01G003390 Citrullus lanatus HOM05D004703 ORTHO05D005801 2.4e-84 316.2 279 60.6
MELO3C005608.2 Cucumis melo HOM05D004703 ORTHO05D005801 2.4e-84 316.2 336 55.4
HPP92_020651 Vanilla planifolia HOM05D004703 ORTHO05D005801 4.0e-84 315.5 262 61.5
RcHm_v2.0_Chr6g0265101 Rosa chinensis HOM05D004703 ORTHO05D005801 5.3e-84 315.1 262 61.5
RcHm_v2.0_Chr6g0265181 Rosa chinensis HOM05D004703 ORTHO05D005801 5.3e-84 315.1 262 61.5
VMungo0251G1928 Vigna mungo HOM05D004703 ORTHO05D005801 1.5e-83 313.5 311 54.3
Cpa.g.sc29.48 Carica papaya HOM05D004703 ORTHO05D005801 1.3e-79 300.4 269 60.2
FAN08G2483 Fragaria x ananassa HOM05D004703 ORTHO05D005801 3.3e-78 295.8 225 67.1
arahy.Tifrunner.gnm1.ann1.TVWC12 Arachis hypogaea HOM05D004703 ORTHO05D005801 4.3e-78 295.4 261 60.9
SalBow6G2643 Salvia bowleyana HOM05D004703 ORTHO05D005801 2.4e-76 289.7 225 64.9
CBR_g30593 Chara braunii HOM05D004703 ORTHO05D005801 6.5e-74 281.6 268 52.2
Mapoly0093s0020 Marchantia polymorpha HOM05D004703 ORTHO05D005801 1.2e-72 277.3 267 52.1
BcaB04g18565 Brassica carinata HOM05D004703 ORTHO05D005801 3.3e-70 269.2 204 72.5
Pp3c15_11750 Physcomitrium patens HOM05D004703 ORTHO05D005801 2.8e-69 266.2 265 51.3
BcaB02g09202 Brassica carinata HOM05D004703 ORTHO05D005801 3.7e-69 265.8 204 71.6
vmacro19246 Vaccinium macrocarpon HOM05D004703 ORTHO05D005801 2.7e-64 249.6 159 78.0
Zm00001eb378400 Zea mays HOM05D004703 ORTHO05D005801 4.6e-64 248.8 175 72.6
BcaB02g11533 Brassica carinata HOM05D004703 ORTHO05D005801 1.4e-63 247.3 261 57.1
arahy.Tifrunner.gnm1.ann1.HPWZ3I Arachis hypogaea HOM05D004703 ORTHO05D005801 2.3e-63 246.5 161 76.4
Nn1g00505 Nelumbo nucifera HOM05D004703 ORTHO05D005801 3.0e-63 246.1 158 75.9
SMO140G0070 Selaginella moellendorffii HOM05D004703 ORTHO05D005801 3.0e-63 246.1 228 53.9
Sc07g0009460 Simmondsia chinensis HOM05D004703 ORTHO05D005801 3.0e-63 246.1 159 76.1
Sp6g05530 Schrenkiella parvula HOM05D004703 ORTHO05D005801 3.3e-62 242.7 136 89.7
RcHm_v2.0_Chr0c37g0502981 Rosa chinensis HOM05D004703 ORTHO05D005801 8.5e-58 228.0 163 68.7
MSTRG.25560 Avicennia marina HOM05D004703 ORTHO05D005801 1.7e-53 213.8 131 78.6
RcHm_v2.0_Chr4g0403961 Rosa chinensis HOM05D004703 ORTHO05D005801 1.8e-52 210.3 130 76.2
Haze_13993 Corylus avellana HOM05D004703 ORTHO05D005801 7.0e-52 208.4 127 81.1
AagrBONN_evm.TU.Sc2ySwM_344.4389 Anthoceros agrestis HOM05D004703 ORTHO05D005801 3.6e-48 196.1 212 49.5
arahy.Tifrunner.gnm1.ann1.QD9SPH Arachis hypogaea HOM05D004703 ORTHO05D005801 1.0e-47 194.5 163 65.6
arahy.Tifrunner.gnm1.ann1.R8Q162 Arachis hypogaea HOM05D004703 ORTHO05D005801 5.2e-47 192.2 159 66.0
arahy.Tifrunner.gnm1.ann1.U0A30G Arachis hypogaea HOM05D004703 ORTHO05D005801 1.5e-46 190.7 160 64.4
arahy.Tifrunner.gnm1.ann1.0W2QGA Arachis hypogaea HOM05D004703 ORTHO05D005801 2.6e-46 189.9 159 65.4
arahy.Tifrunner.gnm1.ann1.TN8QBF Arachis hypogaea HOM05D004703 ORTHO05D005801 5.7e-46 188.7 162 65.4
arahy.Tifrunner.gnm1.ann1.KBZV3C Arachis hypogaea HOM05D004703 ORTHO05D005801 9.7e-46 188.0 159 64.8
BcaC01g04204 Brassica carinata HOM05D004703 ORTHO05D005801 1.7e-45 187.2 138 73.9
arahy.Tifrunner.gnm1.ann1.DGE7ZD Arachis hypogaea HOM05D004703 ORTHO05D005801 2.2e-45 186.8 174 60.9
arahy.Tifrunner.gnm1.ann1.7IH5G2 Arachis hypogaea HOM05D004703 ORTHO05D005801 2.4e-44 183.3 156 65.4
arahy.Tifrunner.gnm1.ann1.J3Q2MP Arachis hypogaea HOM05D004703 ORTHO05D005801 7.7e-43 178.3 158 62.7
arahy.Tifrunner.gnm1.ann1.QT2LTC Arachis hypogaea HOM05D004703 ORTHO05D005801 6.8e-39 165.2 145 63.4
arahy.Tifrunner.gnm1.ann1.EX0EXI Arachis hypogaea HOM05D004703 ORTHO05D005801 2.0e-38 163.7 159 59.7
ATR0905G001 Amborella trichopoda HOM05D004703 ORTHO05D005801 2.4e-36 156.8 152 53.3
Zm00001eb279110 Zea mays HOM05D004703 ORTHO05D005801 1.7e-34 150.6 96 81.2
arahy.Tifrunner.gnm1.ann1.UX21TB Arachis hypogaea HOM05D004703 ORTHO05D005801 2.9e-34 149.8 162 56.2
arahy.Tifrunner.gnm1.ann1.YD44XK Arachis hypogaea HOM05D004703 ORTHO05D005801 2.9e-34 149.8 162 56.2
arahy.Tifrunner.gnm1.ann1.WGQ9HG Arachis hypogaea HOM05D004703 ORTHO05D005801 5.0e-34 149.1 124 65.3
arahy.Tifrunner.gnm1.ann1.QV6CQV Arachis hypogaea HOM05D004703 ORTHO05D005801 6.5e-34 148.7 123 65.0
Zm00001eb113910 Zea mays HOM05D004703 ORTHO05D005801 1.1e-33 147.9 98 78.6
arahy.Tifrunner.gnm1.ann1.L680XF Arachis hypogaea HOM05D004703 ORTHO05D005801 1.9e-33 147.1 109 72.5
arahy.Tifrunner.gnm1.ann1.XKXY1P Arachis hypogaea HOM05D004703 ORTHO05D005801 2.1e-32 143.7 95 80.0
RcHm_v2.0_Chr4g0425481 Rosa chinensis HOM05D004703 ORTHO05D005801 1.8e-28 130.6 129 57.4
arahy.Tifrunner.gnm1.ann1.0PA3BU Arachis hypogaea HOM05D004703 ORTHO05D005801 5.4e-28 129.0 114 61.4
Cfa024731 Carpinus fangiana HOM05D004703 ORTHO05D005801 1.2e-27 127.9 247 34.4
arahy.Tifrunner.gnm1.ann1.DQS0N1 Arachis hypogaea HOM05D004703 ORTHO05D005801 1.3e-26 124.4 139 54.0
ATR0251G001 Amborella trichopoda HOM05D004703 ORTHO05D005801 1.0e-23 114.8 118 51.7
arahy.Tifrunner.gnm1.ann1.5L4UK7 Arachis hypogaea HOM05D004703 ORTHO05D005801 8.9e-23 111.7 138 47.1
vmacro19247 Vaccinium macrocarpon HOM05D004703 ORTHO05D005801 2.2e-21 107.1 81 64.2
arahy.Tifrunner.gnm1.ann1.IA6KQS Arachis hypogaea HOM05D004703 ORTHO05D005801 4.9e-21 105.9 69 78.3
arahy.Tifrunner.gnm1.ann1.2KDH9Q Arachis hypogaea HOM05D004703 ORTHO05D005801 2.0e-19 100.5 101 56.4
arahy.Tifrunner.gnm1.ann1.N0B60F Arachis hypogaea HOM05D003718 ORTHO05D004402 8.6e-18 95.1 54 81.5
arahy.Tifrunner.gnm1.ann1.4J0L4L Arachis hypogaea HOM05D004703 ORTHO05D005801 5.6e-17 92.4 95 55.8
CSS0004055 Camellia sinensis var. sinensis HOM05D004703 ORTHO05D005801 3.1e-15 86.7 58 72.4
arahy.Tifrunner.gnm1.ann1.RAR2PQ Arachis hypogaea HOM05D004703 ORTHO05D030873 7.3e-09 65.5 111 36.0
arahy.Tifrunner.gnm1.ann1.54H2MY Arachis hypogaea HOM05D001155 ORTHO05D015979 8.1e-08 62.0 43 67.4
arahy.Tifrunner.gnm1.ann1.5AIV52 Arachis hypogaea HOM05D001155 ORTHO05D001080 6.8e-07 58.9 36 72.2
arahy.Tifrunner.gnm1.ann1.CXRB51 Arachis hypogaea HOM05D004703 ORTHO05D015979 8.9e-07 58.5 35 74.3


User provided reference genes

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