Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p26900 Brassica napus HOM05D001286 ORTHO05D041492 3.5e-137 491.5 227 100.0
BraA09t38260Z Brassica rapa HOM05D001286 ORTHO05D041492 3.0e-133 478.4 226 96.5
BcaC04g21189 Brassica carinata HOM05D001286 ORTHO05D000440 9.8e-116 420.2 220 89.5
BraA09t38281Z Brassica rapa HOM05D001286 ORTHO05D000440 1.3e-86 323.6 156 96.8
AT1G49360 Arabidopsis thaliana HOM05D001286 ORTHO05D000440 5.5e-42 175.3 232 41.4
BcaB01g01708 Brassica carinata HOM05D001286 ORTHO05D000440 1.2e-28 131.0 65 89.2
BraA10t42747Z Brassica rapa HOM05D001286 ORTHO05D000440 5.9e-28 128.6 244 36.9
A10p04770 Brassica napus HOM05D001286 ORTHO05D000440 3.8e-27 125.9 244 36.5
A10p04790 Brassica napus HOM05D001286 ORTHO05D000440 5.2e-24 115.5 185 39.5
BcaC01g02970 Brassica carinata HOM05D001286 ORTHO05D000440 1.3e-22 110.9 203 36.0
BolC3t18038H Brassica oleracea HOM05D001286 ORTHO05D000440 2.0e-20 103.6 186 36.0
C03p57640 Brassica napus HOM05D001286 ORTHO05D000440 2.7e-20 103.2 186 35.5
BraA10t42745Z Brassica rapa HOM05D001286 ORTHO05D000440 3.8e-19 99.4 181 38.7
Manes.08G026100 Manihot esculenta HOM05D001286 ORTHO05D000440 7.2e-18 95.1 220 31.4
Ciclev10011976m.g Citrus clementina HOM05D001286 ORTHO05D000440 2.8e-17 93.2 220 30.5
CiPaw.10G010500 Carya illinoinensis HOM05D001286 ORTHO05D000440 8.0e-17 91.7 223 30.0
Sabra06G0163600 Salix brachista HOM05D001286 ORTHO05D000440 1.8e-16 90.5 221 30.8
Thecc.05G090300 Theobroma cacao HOM05D001286 ORTHO05D000440 1.8e-16 90.5 220 30.5
BcaC05g24302 Brassica carinata HOM05D001286 ORTHO05D000440 2.3e-16 90.1 169 37.9
C05p04470 Brassica napus HOM05D001286 ORTHO05D000440 2.3e-16 90.1 169 37.9
Potri.006G212600 Populus trichocarpa HOM05D001286 ORTHO05D000440 3.0e-16 89.7 222 30.2
Haze_19623 Corylus avellana HOM05D001286 ORTHO05D000440 4.0e-16 89.4 220 29.1
Cfa016618 Carpinus fangiana HOM05D001286 ORTHO05D000440 6.8e-16 88.6 220 29.1
CANSAT64G2057 Cannabis sativa HOM05D001286 ORTHO05D000440 8.9e-16 88.2 216 29.6
Duzib093G1514 Durio zibethinus HOM05D001286 ORTHO05D000440 8.9e-16 88.2 218 30.7
AUR62006191 Chenopodium quinoa HOM05D001286 ORTHO05D000440 1.5e-15 87.4 220 30.0
AUR62037031 Chenopodium quinoa HOM05D001286 ORTHO05D000440 1.5e-15 87.4 220 30.0
EL10Ac7g16907 Beta vulgaris HOM05D001286 ORTHO05D000440 2.0e-15 87.0 220 30.0
AT1G57790 Arabidopsis thaliana HOM05D001286 ORTHO05D000440 3.4e-15 86.3 221 30.3
Cpa.g.sc5.10 Carica papaya HOM05D001286 ORTHO05D000440 4.4e-15 85.9 218 30.3
COL.COLO4_29718 Corchorus olitorius HOM05D001286 ORTHO05D000440 4.4e-15 85.9 218 30.7
Potri.016G079300 Populus trichocarpa HOM05D001286 ORTHO05D000440 5.7e-15 85.5 220 29.1
Duzib106G1385 Durio zibethinus HOM05D001286 ORTHO05D000440 7.5e-15 85.1 220 29.5
CARHR054340 Cardamine hirsuta HOM05D001286 ORTHO05D000440 9.8e-15 84.7 223 30.0
QL07p038675 Quercus lobata HOM05D001286 ORTHO05D000440 1.3e-14 84.3 215 29.3
Atru.chr8.1486 Acer truncatum HOM05D001286 ORTHO05D000440 2.2e-14 83.6 220 30.0
BolC5t29218H Brassica oleracea HOM05D001286 ORTHO05D000440 2.2e-14 83.6 192 32.8
Gohir.A01G205800 Gossypium hirsutum HOM05D001286 ORTHO05D000440 2.2e-14 83.6 219 28.8
Sc20g0006330 Simmondsia chinensis HOM05D001286 ORTHO05D000440 2.2e-14 83.6 219 28.3
Ah.08g210520 Amaranthus hybridus HOM05D001286 ORTHO05D000440 2.9e-14 83.2 219 29.7
Gohir.D01G195200 Gossypium hirsutum HOM05D001286 ORTHO05D000440 2.9e-14 83.2 219 28.3
Gorai.002G239400 Gossypium raimondii HOM05D001286 ORTHO05D000440 2.9e-14 83.2 219 28.3
Lj5g0005331 Lotus japonicus HOM05D001286 ORTHO05D000440 3.7e-14 82.8 223 28.3
Manes.09G054600 Manihot esculenta HOM05D001286 ORTHO05D000440 3.7e-14 82.8 223 28.3
AT3G18720 Arabidopsis thaliana HOM05D001286 ORTHO05D000440 1.4e-13 80.9 169 32.0
arahy.Tifrunner.gnm1.ann1.2MM3YT Arachis hypogaea HOM05D001286 ORTHO05D000440 1.8e-13 80.5 218 28.4
arahy.Tifrunner.gnm1.ann1.4DR6J6 Arachis hypogaea HOM05D001286 ORTHO05D000440 1.8e-13 80.5 218 28.4
Lalb_Chr01g0018111 Lupinus albus HOM05D001286 ORTHO05D000440 1.8e-13 80.5 220 29.1
Haze_19622 Corylus avellana HOM05D001286 ORTHO05D000440 2.4e-13 80.1 157 33.1
BcaB01g03228 Brassica carinata HOM05D001286 ORTHO05D000440 4.1e-13 79.3 157 31.8
MD14G1023800 Malus domestica HOM05D001286 ORTHO05D000440 4.1e-13 79.3 218 28.4
Prupe.7G109000 Prunus persica HOM05D001286 ORTHO05D000440 5.4e-13 79.0 217 29.0
Ah.15g090840 Amaranthus hybridus HOM05D001286 ORTHO05D000440 7.0e-13 78.6 215 28.4
Dinv31694 Davidia involucrata HOM05D001286 ORTHO05D000440 7.0e-13 78.6 220 27.7
Hund03994 Selenicereus undatus HOM05D001286 ORTHO05D000440 7.0e-13 78.6 220 27.3
C07p24090 Brassica napus HOM05D001286 ORTHO05D000440 9.2e-13 78.2 215 27.4
BolC7t42933H Brassica oleracea HOM05D001286 ORTHO05D000440 9.2e-13 78.2 215 27.4
Carub.0003s1850 Capsella rubella HOM05D001286 ORTHO05D000440 1.2e-12 77.8 207 28.0
Sabra16G0085000 Salix brachista HOM05D001286 ORTHO05D000440 1.2e-12 77.8 215 28.4
Sabra16G0087200 Salix brachista HOM05D001286 ORTHO05D000440 1.2e-12 77.8 215 28.4
Thhalv10023551m.g Eutrema salsugineum HOM05D001286 ORTHO05D000440 2.0e-12 77.0 220 27.7
Glyma.10G073700 Glycine max HOM05D001286 ORTHO05D000440 2.0e-12 77.0 218 28.0
AL2G18850 Arabidopsis lyrata HOM05D001286 ORTHO05D000440 4.6e-12 75.9 218 28.4
BcaB03g14398 Brassica carinata HOM05D001286 ORTHO05D000440 4.6e-12 75.9 195 28.2
FvH4_6g18890 Fragaria vesca HOM05D001286 ORTHO05D000440 4.6e-12 75.9 221 26.2
FAN14G2386 Fragaria x ananassa HOM05D001286 ORTHO05D000440 4.6e-12 75.9 221 26.2
PGR142G0506 Punica granatum HOM05D001286 ORTHO05D000440 4.6e-12 75.9 218 26.6
TWI77G1030 Tripterygium wilfordii HOM05D001286 ORTHO05D000440 1.3e-11 74.3 218 27.1
A07p16390 Brassica napus HOM05D001286 ORTHO05D000440 2.3e-11 73.6 195 28.7
BolC2t08007H Brassica oleracea HOM05D001286 ORTHO05D000440 3.0e-11 73.2 195 28.2
BcaB05g22018 Brassica carinata HOM05D001286 ORTHO05D000440 3.9e-11 72.8 200 30.5
Actinidia05421 Actinidia chinensis HOM05D001286 ORTHO05D000440 6.6e-11 72.0 218 27.1
A01p28080 Brassica napus HOM05D001286 ORTHO05D000440 6.6e-11 72.0 220 27.7
BraA01t02936Z Brassica rapa HOM05D001286 ORTHO05D000440 6.6e-11 72.0 220 27.7
C09p34450 Brassica napus HOM05D001286 ORTHO05D000440 1.1e-10 71.2 31 96.8
BolC9t56288H Brassica oleracea HOM05D001286 ORTHO05D000440 1.1e-10 71.2 31 96.8
A07p01550 Brassica napus HOM05D001286 ORTHO05D000440 1.5e-10 70.9 149 30.2
BcaC09g49525 Brassica carinata HOM05D001286 ORTHO05D000440 1.9e-10 70.5 223 26.9
MD12G1025100 Malus domestica HOM05D001286 ORTHO05D000440 1.9e-10 70.5 199 28.6
Ca_09011_v3 Cicer arietinum L. HOM05D001286 ORTHO05D000440 5.6e-10 68.9 222 26.1
Oeu047204.1 Olea europaea HOM05D001286 ORTHO05D000440 5.6e-10 68.9 220 25.5
AL3G32070 Arabidopsis lyrata HOM05D001286 ORTHO05D000440 9.5e-10 68.2 202 25.7
THA.LOC104816671 Tarenaya hassleriana HOM05D001286 ORTHO05D000440 1.2e-09 67.8 149 30.9
TWI38G2071 Tripterygium wilfordii HOM05D003035 ORTHO05D000440 2.8e-09 66.6 193 26.4
C07p03210 Brassica napus HOM05D001286 ORTHO05D000440 4.7e-09 65.9 149 30.2
BolC7t40718H Brassica oleracea HOM05D001286 ORTHO05D000440 4.7e-09 65.9 149 30.2
Migut.O00798 Erythranthe guttata HOM05D001286 ORTHO05D000440 1.4e-08 64.3 217 24.9
Medtr7g104790 Medicago truncatula HOM05D001286 ORTHO05D000440 2.3e-08 63.5 220 26.4
Sp3g32580 Schrenkiella parvula HOM05D001286 ORTHO05D000440 2.3e-08 63.5 127 33.9
Cfa016617 Carpinus fangiana HOM05D001286 ORTHO05D000440 1.2e-07 61.2 160 29.4
Aa31LG2G11150 Aethionema arabicum HOM05D001286 ORTHO05D000440 2.0e-07 60.5 161 31.1
Thhalv10002259m.g Eutrema salsugineum HOM05D001286 ORTHO05D000440 2.0e-07 60.5 150 28.7
C02p18620 Brassica napus HOM05D001286 ORTHO05D000440 1.7e-06 57.4 183 26.8


User provided reference genes

Program Settings