Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p26200 Brassica napus HOM05D007386 ORTHO05D009210 4.8e-67 258.1 170 100.0
BraA09t38188Z Brassica rapa HOM05D007386 ORTHO05D009210 1.2e-65 253.4 171 99.4
BcaC04g21312 Brassica carinata HOM05D007386 ORTHO05D009210 3.5e-65 251.9 170 90.0
C09p33290 Brassica napus HOM05D007386 ORTHO05D009210 3.5e-65 251.9 170 90.0
BolC9t56165H Brassica oleracea HOM05D007386 ORTHO05D009210 3.5e-65 251.9 170 90.0
BcaB01g01820 Brassica carinata HOM05D007386 ORTHO05D009210 1.3e-64 250.0 171 97.7
Sp6g04310 Schrenkiella parvula HOM05D007386 ORTHO05D009210 8.0e-62 240.7 170 89.4
CARHR252930 Cardamine hirsuta HOM05D007386 ORTHO05D009210 7.5e-60 234.2 172 92.4
Thhalv10029017m.g Eutrema salsugineum HOM05D007386 ORTHO05D009210 2.0e-57 226.1 172 84.3
Carub.0006s3245 Capsella rubella HOM05D007386 ORTHO05D009210 2.9e-56 222.2 129 89.9
AL6G48080 Arabidopsis lyrata HOM05D007386 ORTHO05D009210 8.6e-56 220.7 129 88.4
AT4G04614 Arabidopsis thaliana HOM05D007386 ORTHO05D009210 3.3e-55 218.8 130 88.5
Aa31LG9G9760 Aethionema arabicum HOM05D000698 ORTHO05D009210 2.6e-52 209.1 130 82.3
THA.LOC104813154 Tarenaya hassleriana HOM05D007386 ORTHO05D009210 4.0e-45 185.3 125 73.6
Duzib168G0678 Durio zibethinus HOM05D007386 ORTHO05D009210 6.4e-35 151.4 126 59.5
Gohir.A08G081100 Gossypium hirsutum HOM05D007386 ORTHO05D009210 2.1e-33 146.4 122 58.2
GSVIVG01001191001 Vitis vinifera HOM05D007386 ORTHO05D009210 1.0e-32 144.1 124 60.5
Gohir.D08G093000 Gossypium hirsutum HOM05D007386 ORTHO05D009210 1.7e-32 143.3 126 55.6
Gorai.004G098600 Gossypium raimondii HOM05D007386 ORTHO05D009210 1.7e-32 143.3 126 55.6
COL.COLO4_25451 Corchorus olitorius HOM05D007386 ORTHO05D009210 2.3e-32 142.9 130 55.4
arahy.Tifrunner.gnm1.ann1.ZF8TUR Arachis hypogaea HOM05D007386 ORTHO05D009210 5.1e-32 141.7 133 56.4
Eucgr.K03341 Eucalyptus grandis HOM05D007386 ORTHO05D009210 5.1e-32 141.7 125 58.4
MSTRG.21545 Avicennia marina HOM05D007386 ORTHO05D009210 1.1e-31 140.6 126 59.5
arahy.Tifrunner.gnm1.ann1.JNW8E7 Arachis hypogaea HOM05D007386 ORTHO05D009210 1.5e-31 140.2 133 54.9
Cpa.g.sc95.34 Carica papaya HOM05D007386 ORTHO05D009210 1.5e-31 140.2 132 55.3
Sc05g0001200 Simmondsia chinensis HOM05D007386 ORTHO05D009210 1.5e-31 140.2 125 59.2
Thecc.09G179900 Theobroma cacao HOM05D007386 ORTHO05D009210 1.5e-31 140.2 126 55.6
PGR044G1958 Punica granatum HOM05D007386 ORTHO05D009210 5.6e-31 138.3 132 56.8
Lalb_Chr06g0162851 Lupinus albus HOM05D007386 ORTHO05D009210 1.6e-30 136.7 133 53.4
SalBow4G1029 Salvia bowleyana HOM05D007386 ORTHO05D009210 1.6e-30 136.7 125 57.6
TAR636G2514 Trochodendron aralioides HOM05D007386 ORTHO05D009210 1.6e-30 136.7 134 53.0
TWI18G1441 Tripterygium wilfordii HOM05D007386 ORTHO05D009210 2.1e-30 136.3 123 60.2
Manes.05G078600 Manihot esculenta HOM05D007386 ORTHO05D009210 2.8e-30 136.0 119 58.0
Oeu059791.1 Olea europaea HOM05D007386 ORTHO05D009210 3.6e-30 135.6 126 58.7
ECA247G1531 Erigeron canadensis HOM05D007386 ORTHO05D009210 6.2e-30 134.8 130 56.9
vmacro02599 Vaccinium macrocarpon HOM05D007386 ORTHO05D009210 8.1e-30 134.4 125 56.0
HanXRQChr10g0282251 Helianthus annuus HOM05D007386 ORTHO05D009210 1.1e-29 134.0 133 57.1
Medtr1g071630 Medicago truncatula HOM05D007386 ORTHO05D009210 1.1e-29 134.0 133 54.9
Nn6g34127 Nelumbo nucifera HOM05D007386 ORTHO05D009210 1.4e-29 133.7 145 52.4
MBI11_g22999_MAGBIO Magnolia biondii HOM05D007386 ORTHO05D009210 2.3e-29 132.9 133 54.9
Rhsim13G0027600 Rhododendron simsii HOM05D007386 ORTHO05D009210 6.8e-29 131.3 125 55.2
AUR62030273 Chenopodium quinoa HOM05D007386 ORTHO05D009210 1.5e-28 130.2 130 53.1
Potri.005G213000 Populus trichocarpa HOM05D007386 ORTHO05D009210 1.5e-28 130.2 133 52.6
CSS0002766 Camellia sinensis var. sinensis HOM05D007386 ORTHO05D009210 2.0e-28 129.8 131 51.9
Cfa006177 Carpinus fangiana HOM05D007386 ORTHO05D009210 2.0e-28 129.8 135 53.3
AUR62018389 Chenopodium quinoa HOM05D000027 ORTHO05D000066 2.0e-28 129.8 130 53.1
Ca_09739_v3 Cicer arietinum L. HOM05D007386 ORTHO05D009210 2.0e-28 129.8 129 54.3
Haze_04670 Corylus avellana HOM05D007386 ORTHO05D009210 2.0e-28 129.8 130 54.6
TPR.G25681 Trifolium pratense HOM05D007386 ORTHO05D009210 2.0e-28 129.8 132 52.3
Actinidia00789 Actinidia chinensis HOM05D007386 ORTHO05D009210 3.4e-28 129.0 126 54.0
Ah.04g150680 Amaranthus hybridus HOM05D007386 ORTHO05D009210 3.4e-28 129.0 130 53.1
CiPaw.07G088700 Carya illinoinensis HOM05D007386 ORTHO05D009210 4.4e-28 128.6 119 57.1
Glyma.02G145500 Glycine max HOM05D007386 ORTHO05D009210 4.4e-28 128.6 130 54.6
Psat6g059880 Pisum sativum HOM05D007386 ORTHO05D009210 4.4e-28 128.6 118 57.6
VMungo0720G1463 Vigna mungo HOM05D007386 ORTHO05D009210 5.8e-28 128.3 126 53.2
QL12p020752 Quercus lobata HOM05D007386 ORTHO05D009210 7.6e-28 127.9 131 52.7
Phvul.007G173800 Phaseolus vulgaris HOM05D007386 ORTHO05D009210 9.9e-28 127.5 126 53.2
CSS0036584 Camellia sinensis var. sinensis HOM05D007386 ORTHO05D009210 1.3e-27 127.1 131 51.1
EL10Ac3g07280 Beta vulgaris HOM05D007386 ORTHO05D009210 1.7e-27 126.7 130 52.3
Sabra05G0162700 Salix brachista HOM05D007386 ORTHO05D009210 1.7e-27 126.7 117 55.6
Prupe.8G236700 Prunus persica HOM05D007386 ORTHO05D009210 2.9e-27 125.9 145 51.0
Cc01_g19160 Coffea canephora HOM05D007386 ORTHO05D009210 3.8e-27 125.6 128 57.0
Glyma.10G028600 Glycine max HOM05D007386 ORTHO05D009210 1.1e-26 124.0 124 54.0
HPP92_020354 Vanilla planifolia HOM05D007386 ORTHO05D009210 2.4e-26 122.9 136 55.1
CDE06G2441 Ceratophyllum demersum HOM05D007386 ORTHO05D009210 3.2e-26 122.5 131 52.7
DCAR_018437 Daucus carota HOM05D007386 ORTHO05D009210 1.6e-25 120.2 125 55.2
ATR0665G488 Amborella trichopoda HOM05D007386 ORTHO05D009210 1.3e-24 117.1 120 57.5
CANSAT78G1636 Cannabis sativa HOM05D007386 ORTHO05D009210 1.7e-24 116.7 141 48.2
Lsat_1_v5_gn_9_6101 Lactuca sativa HOM05D007386 ORTHO05D009210 1.6e-22 110.2 134 45.5
Dinv34778 Davidia involucrata HOM05D002659 ORTHO05D002940 3.6e-22 109.0 109 54.1
Hund09518 Selenicereus undatus HOM05D007386 ORTHO05D009210 4.7e-22 108.6 130 47.7
Aqoxy5G00426 Aquilegia oxysepala HOM05D007386 ORTHO05D009210 8.9e-21 104.4 132 47.7
ClCG09G007290 Citrullus lanatus HOM05D007386 ORTHO05D009210 1.2e-20 104.0 126 47.6
Migut.D00331 Erythranthe guttata HOM05D007386 ORTHO05D009210 4.4e-20 102.1 122 50.0
MELO3C015793.2 Cucumis melo HOM05D007386 ORTHO05D009210 7.6e-20 101.3 134 44.8
SGA_v2.0_scaffold1G00514 Striga asiatica HOM05D007386 ORTHO05D009210 1.3e-19 100.5 133 50.4
Ciclev10022575m.g Citrus clementina HOM05D007386 ORTHO05D009210 6.4e-19 98.2 136 45.6
MD03G1260500 Malus domestica HOM05D007386 ORTHO05D009210 1.1e-18 97.4 143 43.4
unitig_0.g1138 Utricularia gibba HOM05D007386 ORTHO05D009210 1.9e-18 96.7 123 48.8
Lj5g0008996 Lotus japonicus HOM05D007386 ORTHO05D009210 5.4e-18 95.1 135 45.2
Nitab4.5_0000252g0090 Nicotiana tabacum HOM05D007386 ORTHO05D009210 2.7e-17 92.8 132 43.2
FAN15G1284 Fragaria x ananassa HOM05D007386 ORTHO05D009210 1.7e-16 90.1 130 45.4
CsaV3_7G027780 Cucumis sativus L. HOM05D007386 ORTHO05D009210 2.3e-16 89.7 138 40.6
SMO351G0424 Selaginella moellendorffii HOM05D007386 ORTHO05D009210 2.3e-16 89.7 125 44.8
MD11G1280800 Malus domestica HOM05D007386 ORTHO05D009210 1.5e-15 87.0 133 39.8
Nitab4.5_0009452g0010 Nicotiana tabacum HOM05D007386 ORTHO05D009210 1.5e-15 87.0 128 42.2
Peaxi162Scf00230g01010 Petunia axillaris HOM05D007386 ORTHO05D009210 9.6e-15 84.3 132 42.4
Pp3c25_4880 Physcomitrium patens HOM05D007386 ORTHO05D009210 9.6e-15 84.3 141 41.1
Sed0008482 Sechium edule HOM05D007386 ORTHO05D009210 6.2e-14 81.6 132 38.6
PSO832G2845 Papaver somniferum HOM05D007386 ORTHO05D009210 3.1e-13 79.3 141 41.8
SGA_v2.0_scaffold244G44361 Striga asiatica HOM05D007386 ORTHO05D009210 4.0e-13 79.0 74 63.5
PSO210G0643 Papaver somniferum HOM05D007386 ORTHO05D009210 6.9e-13 78.2 145 41.4
Atru.chr5.1489 Acer truncatum HOM05D007386 ORTHO05D009210 1.2e-12 77.4 124 40.3
FAN24G1308 Fragaria x ananassa HOM05D007386 ORTHO05D009210 9.9e-12 74.3 131 40.5
FvH4_2g23140 Fragaria vesca HOM05D007386 ORTHO05D009210 2.9e-11 72.8 135 39.3
FAN20G3170 Fragaria x ananassa HOM05D007386 ORTHO05D009210 1.6e-09 67.0 132 37.9
RcHm_v2.0_Chr6g0290391 Rosa chinensis HOM05D007386 ORTHO05D009210 1.3e-06 57.4 137 36.5
CAN.G1105.2 Capsicum annuum HOM05D007386 ORTHO05D009210 2.1e-06 56.6 32 87.5
Solyc09g065510.3 Solanum lycopersicum HOM05D007386 ORTHO05D009210 2.1e-06 56.6 32 87.5
Sopen09g027270 Solanum pennellii HOM05D007386 ORTHO05D009210 2.1e-06 56.6 32 87.5
PGSC0003DMG400019353 Solanum tuberosum HOM05D007386 ORTHO05D009210 6.2e-06 55.1 31 87.1
FAN27G1502 Fragaria x ananassa HOM05D007386 ORTHO05D009210 8.1e-06 54.7 121 37.2


User provided reference genes

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