Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p25150 Brassica napus HOM05D007119 ORTHO05D009220 1.4e-262 909.1 456 100.0
BraA09t38102Z Brassica rapa HOM05D007119 ORTHO05D009220 3.5e-261 904.4 456 99.1
BcaC04g21404 Brassica carinata HOM05D007119 ORTHO05D009220 5.0e-260 900.6 456 98.7
BolC9t56067H Brassica oleracea HOM05D007119 ORTHO05D009220 5.0e-260 900.6 456 98.7
C09p32210 Brassica napus HOM05D007119 ORTHO05D009220 1.3e-255 885.9 456 97.6
BcaB07g30623 Brassica carinata HOM05D007119 ORTHO05D009220 3.4e-240 834.7 458 91.0
Sp2g15290 Schrenkiella parvula HOM05D007119 ORTHO05D009220 3.3e-227 791.6 460 86.3
BcaC06g31092 Brassica carinata HOM05D007119 ORTHO05D009220 1.8e-225 785.8 463 85.1
CARHR147090 Cardamine hirsuta HOM05D007119 ORTHO05D009220 1.7e-223 779.2 462 83.8
AT3G26090 Arabidopsis thaliana HOM05D007119 ORTHO05D009220 4.9e-223 777.7 462 84.2
BcaC06g33928 Brassica carinata HOM05D007119 ORTHO05D009220 8.3e-223 776.9 459 84.1
A06p42260 Brassica napus HOM05D007119 ORTHO05D009220 5.4e-222 774.2 460 83.9
BolC7t44037H Brassica oleracea HOM05D007119 ORTHO05D009220 5.4e-222 774.2 459 84.1
BraA06t27142Z Brassica rapa HOM05D007119 ORTHO05D009220 5.4e-222 774.2 460 83.9
Carub.0005s0397 Capsella rubella HOM05D007119 ORTHO05D009220 7.0e-222 773.9 462 83.5
C07p35060 Brassica napus HOM05D007119 ORTHO05D009220 1.2e-221 773.1 459 83.9
AL5G14790 Arabidopsis lyrata HOM05D007119 ORTHO05D009220 1.0e-220 770.0 462 82.9
Aa31LG2G6270 Aethionema arabicum HOM05D007119 ORTHO05D009220 3.7e-215 751.5 466 80.3
THA.LOC104825682 Tarenaya hassleriana HOM05D007119 ORTHO05D009220 1.3e-199 699.9 461 74.4
Thhalv10004169m.g Eutrema salsugineum HOM05D007119 ORTHO05D009220 9.0e-193 677.2 395 85.1
BcaC06g31096 Brassica carinata HOM05D007119 ORTHO05D009220 1.3e-183 646.7 445 76.2
CiPaw.05G175700 Carya illinoinensis HOM05D007119 ORTHO05D009220 8.7e-172 607.4 455 63.5
Ciclev10031444m.g Citrus clementina HOM05D007119 ORTHO05D009220 1.5e-171 606.7 454 63.9
Manes.13G018700 Manihot esculenta HOM05D007119 ORTHO05D009220 1.3e-170 603.6 455 63.1
GSVIVG01010292001 Vitis vinifera HOM05D007119 ORTHO05D009220 3.7e-170 602.1 452 63.7
Potri.008G181500 Populus trichocarpa HOM05D007119 ORTHO05D009220 3.4e-168 595.5 450 63.8
Dinv14769 Davidia involucrata HOM05D007119 ORTHO05D009220 5.9e-168 594.7 453 62.5
Thecc.02G269100 Theobroma cacao HOM05D007119 ORTHO05D009220 2.9e-167 592.4 455 62.2
QL03p055873 Quercus lobata HOM05D007119 ORTHO05D009220 8.5e-167 590.9 454 61.5
CSS0010905 Camellia sinensis var. sinensis HOM05D007119 ORTHO05D009220 5.5e-166 588.2 455 62.0
COL.COLO4_23551 Corchorus olitorius HOM05D007119 ORTHO05D009220 5.5e-166 588.2 455 61.1
Eucgr.H04699 Eucalyptus grandis HOM05D007119 ORTHO05D009220 1.6e-165 586.6 455 60.9
Prupe.1G238900 Prunus persica HOM05D007119 ORTHO05D009220 2.1e-165 586.3 447 62.0
Actinidia15126 Actinidia chinensis HOM05D007119 ORTHO05D009220 1.8e-164 583.2 452 61.9
TAR629G0375 Trochodendron aralioides HOM05D007119 ORTHO05D009220 1.8e-164 583.2 454 61.7
Gorai.008G162700 Gossypium raimondii HOM05D007119 ORTHO05D009220 2.3e-164 582.8 456 61.2
TWI36G1063 Tripterygium wilfordii HOM05D007119 ORTHO05D009220 3.0e-164 582.4 458 61.6
Gohir.D12G151200 Gossypium hirsutum HOM05D007119 ORTHO05D009220 3.9e-164 582.0 456 61.2
Medtr3g086170 Medicago truncatula HOM05D007119 ORTHO05D009220 1.5e-163 580.1 452 61.1
arahy.Tifrunner.gnm1.ann1.3UY64B Arachis hypogaea HOM05D007119 ORTHO05D009220 1.3e-162 577.0 456 60.3
arahy.Tifrunner.gnm1.ann1.U7Q0BA Arachis hypogaea HOM05D007119 ORTHO05D009220 1.3e-162 577.0 456 60.3
Atru.chr11.2204 Acer truncatum HOM05D007119 ORTHO05D009220 1.6e-162 576.6 453 60.7
Duzib248G1022 Durio zibethinus HOM05D007119 ORTHO05D009220 2.2e-162 576.2 454 61.7
RcHm_v2.0_Chr4g0432041 Rosa chinensis HOM05D007119 ORTHO05D009220 2.2e-162 576.2 449 61.5
FvH4_4g24980 Fragaria vesca HOM05D007119 ORTHO05D009220 3.7e-162 575.5 449 62.1
CANSAT01G1522 Cannabis sativa HOM05D007119 ORTHO05D009220 4.1e-161 572.0 458 59.8
Glyma.18G011400 Glycine max HOM05D007119 ORTHO05D009220 5.3e-161 571.6 453 60.3
Phvul.001G257500 Phaseolus vulgaris HOM05D007119 ORTHO05D009220 5.3e-161 571.6 453 60.9
TPR.G14230 Trifolium pratense HOM05D007119 ORTHO05D009220 5.3e-161 571.6 467 58.7
Haze_12309 Corylus avellana HOM05D007119 ORTHO05D009220 2.6e-160 569.3 522 54.6
Glyma.11G245800 Glycine max HOM05D007119 ORTHO05D009220 4.5e-160 568.5 453 59.8
Hma1.2p1_0079F.1_g041390 Hydrangea macrophylla HOM05D007119 ORTHO05D009220 7.7e-160 567.8 459 61.4
Gorai.005G173800 Gossypium raimondii HOM05D007119 ORTHO05D009220 2.2e-159 566.2 464 60.1
Lalb_Chr23g0277791 Lupinus albus HOM05D007119 ORTHO05D009220 2.9e-159 565.8 453 60.9
MD13G1107500 Malus domestica HOM05D007119 ORTHO05D009220 3.8e-159 565.5 451 60.1
MD16G1107500 Malus domestica HOM05D007119 ORTHO05D009220 1.1e-158 563.9 449 61.0
TAR371G0886 Trochodendron aralioides HOM05D007119 ORTHO05D009220 1.9e-158 563.1 444 61.7
Sed0010682 Sechium edule HOM05D007119 ORTHO05D009220 5.5e-158 561.6 453 60.0
CAN.G49.9 Capsicum annuum HOM05D007119 ORTHO05D009220 2.7e-157 559.3 455 58.9
CsaV3_5G030670 Cucumis sativus L. HOM05D007119 ORTHO05D009220 1.5e-155 553.5 453 59.6
Lj6g0003042 Lotus japonicus HOM05D007119 ORTHO05D009220 2.6e-155 552.7 452 59.7
Nn3g16605 Nelumbo nucifera HOM05D007119 ORTHO05D009220 3.3e-155 552.4 458 57.2
Gohir.A03G131100 Gossypium hirsutum HOM05D007119 ORTHO05D009220 9.7e-155 550.8 464 58.8
DCAR_007027 Daucus carota HOM05D007119 ORTHO05D009220 1.7e-154 550.1 449 59.0
Sabra08G0138500 Salix brachista HOM05D007119 ORTHO05D009220 1.1e-153 547.4 548 51.6
Cc11_g16270 Coffea canephora HOM05D007119 ORTHO05D009220 2.4e-153 546.2 458 57.0
Lsat_1_v5_gn_8_150440 Lactuca sativa HOM05D007119 ORTHO05D009220 9.1e-153 544.3 459 58.4
vmacro16153 Vaccinium macrocarpon HOM05D007119 ORTHO05D009220 9.1e-153 544.3 511 54.8
Gohir.A12G146600 Gossypium hirsutum HOM05D007119 ORTHO05D009220 1.2e-152 543.9 463 57.2
Sc14g0008910 Simmondsia chinensis HOM05D007119 ORTHO05D009220 1.3e-151 540.4 456 57.9
VMungo1383G3713 Vigna mungo HOM05D007119 ORTHO05D009220 1.1e-150 537.3 453 56.3
Migut.E00228 Erythranthe guttata HOM05D007119 ORTHO05D009220 2.1e-149 533.1 459 56.6
HanXRQChr12g0372081 Helianthus annuus HOM05D007119 ORTHO05D009220 3.9e-148 528.9 448 58.3
MSTRG.13331 Avicennia marina HOM05D007119 ORTHO05D009220 6.7e-148 528.1 453 56.7
Aqoxy3G01324 Aquilegia oxysepala HOM05D007119 ORTHO05D009220 2.6e-147 526.2 452 55.5
Solyc05g014160.4 Solanum lycopersicum HOM05D007119 ORTHO05D009220 7.4e-147 524.6 432 58.6
Gohir.D02G154800 Gossypium hirsutum HOM05D007119 ORTHO05D009220 1.0e-143 514.2 397 63.5
ATR0824G105 Amborella trichopoda HOM05D007119 ORTHO05D009220 5.0e-143 511.9 459 53.8
Ah.03g133650 Amaranthus hybridus HOM05D007119 ORTHO05D009220 6.5e-143 511.5 453 53.9
PSO017G0770 Papaver somniferum HOM05D007119 ORTHO05D009220 6.5e-143 511.5 460 55.2
FAN22G2246 Fragaria x ananassa HOM05D007119 ORTHO05D009220 8.5e-143 511.1 438 58.0
Hund25421 Selenicereus undatus HOM05D007119 ORTHO05D009220 2.7e-141 506.1 470 53.2
ECA233G0282 Erigeron canadensis HOM05D007119 ORTHO05D009220 1.2e-139 500.7 416 57.7
SalBow8G1200 Salvia bowleyana HOM05D007119 ORTHO05D009220 1.2e-139 500.7 436 55.5
Psat5g093400 Pisum sativum HOM05D007119 ORTHO05D009220 1.8e-137 493.4 390 60.0
AUR62024193 Chenopodium quinoa HOM05D007119 ORTHO05D009220 9.1e-137 491.1 476 50.2
Nn4g22487 Nelumbo nucifera HOM05D007119 ORTHO05D009220 6.1e-133 478.4 391 57.3
Peaxi162Scf00128g00648 Petunia axillaris HOM05D007119 ORTHO05D009220 2.3e-132 476.5 403 57.3
ClCG05G026170 Citrullus lanatus HOM05D007119 ORTHO05D009220 8.8e-132 474.6 464 53.7
Lj6C818G13 Lonicera japonica HOM05D007119 ORTHO05D009220 1.2e-128 464.2 426 56.1
SGA_v2.0_scaffold87G27113 Striga asiatica HOM05D007119 ORTHO05D009220 1.0e-127 461.1 393 57.0
EL10As2g23223 Beta vulgaris HOM05D007119 ORTHO05D009220 4.7e-125 452.2 466 49.6
MELO3C011902.2 Cucumis melo HOM05D007119 ORTHO05D009220 3.9e-111 406.0 379 56.7
SEGI_05094 Sequoiadendron giganteum HOM05D007119 ORTHO05D009220 4.9e-106 389.0 399 48.1
Oeu012665.1 Olea europaea HOM05D007119 ORTHO05D009220 1.4e-105 387.5 323 56.7
Nitab4.5_0002688g0040 Nicotiana tabacum HOM05D007119 ORTHO05D009220 1.9e-105 387.1 333 56.8
Ca_16499_v3 Cicer arietinum L. HOM05D007119 ORTHO05D009220 2.6e-99 366.7 302 59.9
Sopen05g009180 Solanum pennellii HOM05D007119 ORTHO05D009220 5.8e-99 365.5 311 57.9
AUR62005541 Chenopodium quinoa HOM05D007119 ORTHO05D009220 5.4e-81 305.8 323 48.9
MBI08_g43995_MAGBIO Magnolia biondii HOM05D007119 ORTHO05D009220 1.6e-77 294.3 256 59.0
MBI08_g44099_MAGBIO Magnolia biondii HOM05D007119 ORTHO05D009220 1.6e-77 294.3 256 59.0
AagrBONN_evm.TU.Sc2ySwM_117.1226 Anthoceros agrestis HOM05D001585 ORTHO05D001677 4.5e-75 286.2 452 36.3
SMO165G0024 Selaginella moellendorffii HOM05D007119 ORTHO05D009220 9.0e-68 261.9 356 39.3
HanXRQChr08g0208021 Helianthus annuus HOM05D007119 ORTHO05D009220 3.4e-59 233.4 215 54.4
Nitab4.5_0000041g0220 Nicotiana tabacum HOM05D007119 ORTHO05D009220 1.1e-57 228.4 209 54.5
PGSC0003DMG401010743 Solanum tuberosum HOM05D007119 ORTHO05D009220 7.1e-57 225.7 184 60.9
CANSAT25G1465 Cannabis sativa HOM05D007119 ORTHO05D009220 4.1e-28 130.2 114 59.6
HanXRQChr08g0208031 Helianthus annuus HOM05D007119 ORTHO05D009220 8.3e-21 105.9 100 58.0
Nitab4.5_0002688g0050 Nicotiana tabacum HOM05D007119 ORTHO05D036862 1.3e-13 82.0 67 56.7
Nitab4.5_0000041g0230 Nicotiana tabacum HOM05D007119 ORTHO05D036862 6.3e-13 79.7 67 56.7
Peaxi162Scf00128g00647 Petunia axillaris HOM05D007119 ORTHO05D036862 6.6e-10 69.7 76 48.7


User provided reference genes

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