Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p24560 Brassica napus HOM05D000313 ORTHO05D000065 4.0e-33 144.4 88 100.0
BraA06t24916Z Brassica rapa HOM05D000313 ORTHO05D000065 2.0e-11 72.4 34 100.0
BcaB07g33685 Brassica carinata HOM05D000313 ORTHO05D000065 3.3e-11 71.6 35 94.3
BcaB07g33686 Brassica carinata HOM05D000313 ORTHO05D000065 3.3e-11 71.6 35 94.3
BcaB05g23049 Brassica carinata HOM05D000313 ORTHO05D000065 2.2e-10 68.9 40 80.0
BcaNung06600 Brassica carinata HOM05D000313 ORTHO05D000065 3.7e-10 68.2 108 43.5
C08p15350 Brassica napus HOM05D000313 ORTHO05D000065 4.8e-10 67.8 39 79.5
BcaNung04477 Brassica carinata HOM05D000313 ORTHO05D000065 1.1e-09 66.6 39 76.9
C08p25290 Brassica napus HOM05D000313 ORTHO05D000065 1.4e-09 66.2 41 73.2
BolC8t50151H Brassica oleracea HOM05D000313 ORTHO05D000065 1.4e-09 66.2 41 73.2
BraA08t34530Z Brassica rapa HOM05D000313 ORTHO05D000065 1.4e-09 66.2 40 75.0
BcaB01g01178 Brassica carinata HOM05D000313 ORTHO05D000065 1.8e-09 65.9 40 77.5
A02p26890 Brassica napus HOM05D000313 ORTHO05D000065 1.8e-09 65.9 40 72.5
C08p36910 Brassica napus HOM05D000313 ORTHO05D000065 1.8e-09 65.9 41 68.3
BolC3t21218H Brassica oleracea HOM05D000313 ORTHO05D000065 1.8e-09 65.9 41 68.3
BcaB06g27595 Brassica carinata HOM05D000313 ORTHO05D000065 2.4e-09 65.5 38 78.9
C01p51210 Brassica napus HOM05D000313 ORTHO05D000065 2.4e-09 65.5 37 78.4
C05p47720 Brassica napus HOM05D000313 ORTHO05D000065 4.1e-09 64.7 40 72.5
BolC5t33481H Brassica oleracea HOM05D000313 ORTHO05D000065 4.1e-09 64.7 40 72.5
A09p63130 Brassica napus HOM05D000313 ORTHO05D000065 5.3e-09 64.3 44 59.1
BraA09t41667Z Brassica rapa HOM05D000313 ORTHO05D000065 5.3e-09 64.3 44 59.1
BcaC09g48338 Brassica carinata HOM05D000313 ORTHO05D000065 6.9e-09 63.9 40 72.5
C02p57090 Brassica napus HOM05D000313 ORTHO05D000065 6.9e-09 63.9 35 80.0
C07p41800 Brassica napus HOM05D000313 ORTHO05D000065 6.9e-09 63.9 62 58.1
BcaB05g24308 Brassica carinata HOM05D000313 ORTHO05D000065 9.1e-09 63.5 35 77.1
BcaC07g38309 Brassica carinata HOM05D000313 ORTHO05D000065 9.1e-09 63.5 62 56.5
A09p40830 Brassica napus HOM05D000313 ORTHO05D000065 9.1e-09 63.5 40 72.5
A03p36970 Brassica napus HOM05D000313 ORTHO05D000065 1.2e-08 63.2 35 71.4
BraA03t12859Z Brassica rapa HOM05D000313 ORTHO05D000065 1.2e-08 63.2 35 71.4
BcaC01g00015 Brassica carinata HOM05D000313 ORTHO05D000065 1.5e-08 62.8 35 74.3
C03p74810 Brassica napus HOM05D000313 ORTHO05D000065 1.5e-08 62.8 35 74.3
BolC2t09667H Brassica oleracea HOM05D000313 ORTHO05D021747 1.5e-08 62.8 35 74.3
C08p10590 Brassica napus HOM05D000313 ORTHO05D000065 2.0e-08 62.4 35 71.4
BolC2t12325H Brassica oleracea HOM05D000313 ORTHO05D000065 2.0e-08 62.4 35 77.1
BcaC04g20219 Brassica carinata HOM05D000313 ORTHO05D000065 2.6e-08 62.0 33 75.8
C05p18010 Brassica napus HOM05D000313 ORTHO05D000065 2.6e-08 62.0 35 68.6
BcaB01g04375 Brassica carinata HOM05D000313 ORTHO05D000065 3.4e-08 61.6 37 64.9
BcaB03g15004 Brassica carinata HOM05D000313 ORTHO05D000065 4.5e-08 61.2 37 64.9
C04p53310 Brassica napus HOM05D003570 ORTHO05D004207 4.5e-08 61.2 37 70.3
C09p24470 Brassica napus HOM05D000313 ORTHO05D000065 4.5e-08 61.2 35 71.4
BraA09t37737Z Brassica rapa HOM05D000313 ORTHO05D000065 4.5e-08 61.2 38 71.1
BcaC02g08536 Brassica carinata HOM05D003570 ORTHO05D004207 5.9e-08 60.8 40 67.5
BcaC09g49506 Brassica carinata HOM05D000313 ORTHO05D000065 5.9e-08 60.8 35 68.6
BcaNung02812 Brassica carinata HOM05D000313 ORTHO05D000065 5.9e-08 60.8 33 75.8
C01p35780 Brassica napus HOM05D000313 ORTHO05D000065 5.9e-08 60.8 35 68.6
C06p34380 Brassica napus HOM05D000313 ORTHO05D000065 5.9e-08 60.8 33 75.8
BolC1t03539H Brassica oleracea HOM05D000313 ORTHO05D000065 5.9e-08 60.8 35 68.6
BolC7t44711H Brassica oleracea HOM05D000313 ORTHO05D000065 5.9e-08 60.8 33 75.8
BolC8t48734H Brassica oleracea HOM05D000313 ORTHO05D000065 5.9e-08 60.8 35 71.4
BolC3t17179H Brassica oleracea HOM05D000313 ORTHO05D000065 7.7e-08 60.5 36 69.4
BcaC02g10703 Brassica carinata HOM05D000313 ORTHO05D000065 1.0e-07 60.1 35 71.4
A03p65540 Brassica napus HOM05D000313 ORTHO05D000065 1.0e-07 60.1 65 55.4
A07p04670 Brassica napus HOM05D000313 ORTHO05D042285 1.0e-07 60.1 35 77.1
C03p49020 Brassica napus HOM05D000313 ORTHO05D000065 1.0e-07 60.1 35 71.4
C04p26900 Brassica napus HOM05D000313 ORTHO05D000065 1.0e-07 60.1 35 71.4
BolC4t24108H Brassica oleracea HOM05D000313 ORTHO05D000065 1.0e-07 60.1 35 71.4
BraA07t28253Z Brassica rapa HOM05D000313 ORTHO05D042285 1.0e-07 60.1 35 77.1
BcaC05g25841 Brassica carinata HOM05D000313 ORTHO05D000065 1.3e-07 59.7 62 51.6
C02p16210 Brassica napus HOM05D000313 ORTHO05D000065 1.3e-07 59.7 33 69.7
C02p24380 Brassica napus HOM05D000313 ORTHO05D000065 1.3e-07 59.7 33 69.7
C05p33380 Brassica napus HOM05D000313 ORTHO05D000065 1.7e-07 59.3 40 70.0
BolC5t32686H Brassica oleracea HOM05D000313 ORTHO05D000065 2.2e-07 58.9 46 60.9
BolC9t55362H Brassica oleracea HOM05D000313 ORTHO05D000065 2.2e-07 58.9 62 53.2
BcaC07g37052 Brassica carinata HOM05D000313 ORTHO05D000065 2.9e-07 58.5 40 65.0
C02p24580 Brassica napus HOM05D000313 ORTHO05D000065 2.9e-07 58.5 40 67.5
C01p50060 Brassica napus HOM05D000313 ORTHO05D000065 3.8e-07 58.2 40 67.5
C08p38360 Brassica napus HOM05D000313 ORTHO05D018747 3.8e-07 58.2 35 74.3
BolC1t04960H Brassica oleracea HOM05D000313 ORTHO05D000065 3.8e-07 58.2 40 67.5
BolC4t24468H Brassica oleracea HOM05D000313 ORTHO05D018747 3.8e-07 58.2 35 74.3
A07p18160 Brassica napus HOM05D003570 ORTHO05D004207 5.0e-07 57.8 39 64.1
BraA01t00580Z Brassica rapa HOM05D003570 ORTHO05D004207 5.0e-07 57.8 39 64.1
BolC2t11780H Brassica oleracea HOM05D000313 ORTHO05D000065 6.5e-07 57.4 31 77.4
BcaNung02470 Brassica carinata HOM05D000313 ORTHO05D000065 8.5e-07 57.0 46 58.7
C07p30160 Brassica napus HOM05D003570 ORTHO05D004207 8.5e-07 57.0 34 73.5
BcaC09g48412 Brassica carinata HOM05D000313 ORTHO05D000065 1.1e-06 56.6 40 65.0
A07p19900 Brassica napus HOM05D003570 ORTHO05D004207 1.1e-06 56.6 39 64.1
BcaNung02458 Brassica carinata HOM05D000313 ORTHO05D027470 4.2e-06 54.7 41 61.0
BcaC05g27392 Brassica carinata HOM05D000313 ORTHO05D000065 5.5e-06 54.3 35 65.7
BcaB08g35222 Brassica carinata HOM05D000313 ORTHO05D000065 7.2e-06 53.9 35 65.7
BraA03t11868Z Brassica rapa HOM05D000313 ORTHO05D028167 7.2e-06 53.9 54 46.3
BcaC08g45732 Brassica carinata HOM05D000313 ORTHO05D039421 9.4e-06 53.5 34 61.8
C01p33700 Brassica napus HOM05D000313 ORTHO05D027416 9.4e-06 53.5 32 75.0


User provided reference genes

Program Settings