Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p24440 Brassica napus HOM05D006591 ORTHO05D007861 2.2e-44 183.3 245 100.0
BraA09t38037Z Brassica rapa HOM05D006591 ORTHO05D007861 4.6e-42 175.6 116 98.3
BcaC04g21487 Brassica carinata HOM05D006591 ORTHO05D007861 1.9e-40 170.2 245 90.2
C09p31230 Brassica napus HOM05D006591 ORTHO05D007861 1.2e-39 167.5 115 80.9
BolC9t55979H Brassica oleracea HOM05D006591 ORTHO05D007861 1.2e-39 167.5 115 80.9
BcaB07g30669 Brassica carinata HOM05D006591 ORTHO05D007861 2.3e-38 163.3 246 95.5
Thhalv10004832m.g Eutrema salsugineum HOM05D006591 ORTHO05D007861 1.7e-33 147.1 115 72.2
Sp2g14340 Schrenkiella parvula HOM05D006591 ORTHO05D007861 5.0e-33 145.6 116 84.5
Carub.0005s0239 Capsella rubella HOM05D006591 ORTHO05D007861 3.7e-28 129.4 113 79.6
AL5G13180 Arabidopsis lyrata HOM05D006591 ORTHO05D007861 5.4e-27 125.6 112 78.6
CARHR145770 Cardamine hirsuta HOM05D006591 ORTHO05D007861 2.1e-26 123.6 114 78.1
AT2G03430 Arabidopsis thaliana HOM05D006591 ORTHO05D007861 4.3e-24 115.9 102 80.4
BcaC02g07876 Brassica carinata HOM05D006591 ORTHO05D007861 1.2e-23 114.4 112 65.2
Aa31LG2G7160 Aethionema arabicum HOM05D006961 ORTHO05D008809 1.1e-22 111.3 109 66.1
Solyc05g012590.4 Solanum lycopersicum HOM05D006591 ORTHO05D007861 5.2e-22 109.0 106 54.7
THA.LOC104801815 Tarenaya hassleriana HOM05D006591 ORTHO05D007861 8.9e-22 108.2 99 72.7
Cfa008903 Carpinus fangiana HOM05D006591 ORTHO05D007861 2.6e-21 106.7 116 65.5
QL03p070967 Quercus lobata HOM05D006591 ORTHO05D007861 2.6e-21 106.7 116 50.0
Sopen05g007420 Solanum pennellii HOM05D006591 ORTHO05D007861 9.9e-21 104.8 106 64.2
Psat2g128080 Pisum sativum HOM05D006591 ORTHO05D007861 1.3e-20 104.4 116 62.9
GSVIVG01012181001 Vitis vinifera HOM05D006591 ORTHO05D007861 1.3e-20 104.4 102 65.7
DCAR_027452 Daucus carota HOM05D006591 ORTHO05D007861 1.7e-20 104.0 103 67.0
TWI79G1606 Tripterygium wilfordii HOM05D006591 ORTHO05D007861 1.7e-20 104.0 106 63.2
TPR.G2283 Trifolium pratense HOM05D006591 ORTHO05D007861 2.9e-20 103.2 105 52.4
C06p01310 Brassica napus HOM05D006591 ORTHO05D007861 6.4e-20 102.1 119 61.3
Cpa.g.sc1.95 Carica papaya HOM05D006591 ORTHO05D007861 6.4e-20 102.1 101 52.5
Phvul.002G068900 Phaseolus vulgaris HOM05D006591 ORTHO05D007861 6.4e-20 102.1 116 47.4
Cc11_g12350 Coffea canephora HOM05D006591 ORTHO05D007861 8.4e-20 101.7 101 53.5
TWI75G0359 Tripterygium wilfordii HOM05D006591 ORTHO05D007861 8.4e-20 101.7 116 62.1
Manes.05G107800 Manihot esculenta HOM05D006591 ORTHO05D007861 1.4e-19 100.9 106 64.2
Nn4g23331 Nelumbo nucifera HOM05D006591 ORTHO05D007861 5.4e-19 99.0 102 66.7
PGSC0003DMG400028326 Solanum tuberosum HOM05D006591 ORTHO05D007861 5.4e-19 99.0 106 62.3
CAN.G1340.9 Capsicum annuum HOM05D006591 ORTHO05D007861 7.1e-19 98.6 103 62.1
Ciclev10032613m.g Citrus clementina HOM05D006591 ORTHO05D007861 1.2e-18 97.8 101 62.4
Potri.010G161300 Populus trichocarpa HOM05D006591 ORTHO05D007861 1.2e-18 97.8 100 67.0
Hund25197 Selenicereus undatus HOM05D006591 ORTHO05D007861 1.2e-18 97.8 113 48.7
vmacro16368 Vaccinium macrocarpon HOM05D006591 ORTHO05D007861 1.2e-18 97.8 106 51.9
PGR119G1238 Punica granatum HOM05D006591 ORTHO05D007861 1.6e-18 97.4 101 48.5
MELO3C002930.2 Cucumis melo HOM05D006591 ORTHO05D007861 2.1e-18 97.1 116 47.4
Peaxi162Scf00314g00027 Petunia axillaris HOM05D006591 ORTHO05D007861 2.1e-18 97.1 100 60.0
Lj3C1032T3 Lonicera japonica HOM05D006591 ORTHO05D007861 3.5e-18 96.3 120 60.8
Lj2g0025600 Lotus japonicus HOM05D006591 ORTHO05D007861 3.5e-18 96.3 117 56.4
Sc11g0002290 Simmondsia chinensis HOM05D006591 ORTHO05D007861 4.6e-18 95.9 116 59.5
CANSAT64G0984 Cannabis sativa HOM05D006591 ORTHO05D007861 6.0e-18 95.5 116 57.8
Lalb_Chr10g0098581 Lupinus albus HOM05D006591 ORTHO05D007861 6.0e-18 95.5 116 60.3
Actinidia19919 Actinidia chinensis HOM05D006591 ORTHO05D007861 7.8e-18 95.1 116 43.1
CiPaw.06G090100 Carya illinoinensis HOM05D006591 ORTHO05D007861 7.8e-18 95.1 102 65.7
Dinv16706 Davidia involucrata HOM05D006591 ORTHO05D007861 1.0e-17 94.7 102 62.7
Sabra10G0122800 Salix brachista HOM05D006591 ORTHO05D007861 1.3e-17 94.4 101 66.3
Haze_11932 Corylus avellana HOM05D006591 ORTHO05D007861 1.7e-17 94.0 142 41.5
Duzib268G0337 Durio zibethinus HOM05D006591 ORTHO05D007861 1.7e-17 94.0 114 46.5
RcHm_v2.0_Chr4g0438821 Rosa chinensis HOM05D006591 ORTHO05D007861 2.3e-17 93.6 105 64.8
Gohir.D05G306200 Gossypium hirsutum HOM05D006591 ORTHO05D007861 3.0e-17 93.2 105 48.6
Rhsim12G0134100 Rhododendron simsii HOM05D006591 ORTHO05D007861 3.0e-17 93.2 100 52.0
Atru.chr11.1685 Acer truncatum HOM05D006591 ORTHO05D007861 3.9e-17 92.8 116 57.8
COL.COLO4_05797 Corchorus olitorius HOM05D006591 ORTHO05D007861 3.9e-17 92.8 102 48.0
Gorai.009G326200 Gossypium raimondii HOM05D006591 ORTHO05D007861 3.9e-17 92.8 102 49.0
Actinidia31944 Actinidia chinensis HOM05D006591 ORTHO05D007861 6.6e-17 92.0 116 44.0
Aqoxy3G00449 Aquilegia oxysepala HOM05D006591 ORTHO05D007861 6.6e-17 92.0 113 61.9
TPR.G24426 Trifolium pratense HOM05D006591 ORTHO05D007861 6.6e-17 92.0 105 64.8
Gohir.A05G306200 Gossypium hirsutum HOM05D006591 ORTHO05D007861 8.7e-17 91.7 105 47.6
TAR374G1558 Trochodendron aralioides HOM05D006591 ORTHO05D007861 8.7e-17 91.7 116 56.9
VMungo1215G0675 Vigna mungo HOM05D006591 ORTHO05D007861 1.1e-16 91.3 114 57.9
Glyma.02G113900 Glycine max HOM05D006591 ORTHO05D007861 2.5e-16 90.1 116 48.3
Oeu028261.1 Olea europaea HOM05D006591 ORTHO05D007861 2.5e-16 90.1 103 58.3
MSTRG.2323 Avicennia marina HOM05D006591 ORTHO05D007861 4.3e-16 89.4 107 59.8
CSS0032544 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 7.3e-16 88.6 118 44.9
HanXRQChr17g0545461 Helianthus annuus HOM05D006591 ORTHO05D007861 7.3e-16 88.6 101 56.4
PSO017G3262 Papaver somniferum HOM05D006591 ORTHO05D007861 7.3e-16 88.6 117 59.0
FAN17G0139 Fragaria x ananassa HOM05D006591 ORTHO05D007861 1.2e-15 87.8 104 62.5
arahy.Tifrunner.gnm1.ann1.09DLU7 Arachis hypogaea HOM05D006591 ORTHO05D007861 1.6e-15 87.4 99 61.6
Medtr5g043640 Medicago truncatula HOM05D006591 ORTHO05D007861 1.6e-15 87.4 116 57.8
FAN07G2187 Fragaria x ananassa HOM05D006591 ORTHO05D007861 2.1e-15 87.0 106 60.4
MD13G1065800 Malus domestica HOM05D006591 ORTHO05D007861 2.8e-15 86.7 116 57.8
FAN12G1471 Fragaria x ananassa HOM05D006591 ORTHO05D007861 3.6e-15 86.3 104 61.5
FAN22G1196 Fragaria x ananassa HOM05D006591 ORTHO05D007861 3.6e-15 86.3 106 60.4
arahy.Tifrunner.gnm1.ann1.74ATFD Arachis hypogaea HOM05D006591 ORTHO05D007861 4.7e-15 85.9 99 47.5
BolC4t27718H Brassica oleracea HOM05D006591 ORTHO05D007861 4.7e-15 85.9 117 53.0
CsaV3_5G025480 Cucumis sativus L. HOM05D006591 ORTHO05D007861 4.7e-15 85.9 116 59.5
Eucgr.G02461 Eucalyptus grandis HOM05D006591 ORTHO05D007861 4.7e-15 85.9 115 58.3
C04p62430 Brassica napus HOM05D006591 ORTHO05D007861 6.2e-15 85.5 87 65.5
ECA246G1963 Erigeron canadensis HOM05D006591 ORTHO05D007861 6.2e-15 85.5 105 56.2
FvH4_4g30470 Fragaria vesca HOM05D006591 ORTHO05D007861 6.2e-15 85.5 104 61.5
Glyma.01G055500 Glycine max HOM05D006591 ORTHO05D007861 6.2e-15 85.5 116 55.2
CDE07G0054 Ceratophyllum demersum HOM05D006591 ORTHO05D007861 1.1e-14 84.7 117 57.3
Migut.E00061 Erythranthe guttata HOM05D006591 ORTHO05D007861 1.4e-14 84.3 107 59.8
MD16G1064400 Malus domestica HOM05D006591 ORTHO05D007861 1.4e-14 84.3 102 61.8
Prupe.1G282400 Prunus persica HOM05D006591 ORTHO05D007861 2.4e-14 83.6 116 56.0
CSS0024373 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 3.1e-14 83.2 111 45.9
SGA_v2.0_scaffold287G47153 Striga asiatica HOM05D006591 ORTHO05D007861 4.0e-14 82.8 107 61.7
EL10Ac6g14958 Beta vulgaris HOM05D006591 ORTHO05D007861 5.2e-14 82.4 105 56.2
Mapoly0001s0139 Marchantia polymorpha HOM05D006591 ORTHO05D007861 5.2e-14 82.4 101 46.5
PSO478G2874 Papaver somniferum HOM05D006591 ORTHO05D007861 5.2e-14 82.4 116 58.6
Thecc.02G335700 Theobroma cacao HOM05D006591 ORTHO05D007861 6.9e-14 82.0 76 59.2
Ca_04911_v3 Cicer arietinum L. HOM05D006591 ORTHO05D007861 1.2e-13 81.3 77 57.1
CSS0002938 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 1.5e-13 80.9 111 45.0
CSS0020090 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 1.5e-13 80.9 111 45.0
unitig_22.g5555 Utricularia gibba HOM05D006591 ORTHO05D007861 2.0e-13 80.5 114 55.3
Lsat_1_v5_gn_3_56260 Lactuca sativa HOM05D006591 ORTHO05D007861 2.6e-13 80.1 108 56.5
CSS0029304 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 4.4e-13 79.3 111 48.6
AagrBONN_evm.TU.Sc2ySwM_344.1136 Anthoceros agrestis HOM05D006591 ORTHO05D007861 3.2e-11 73.2 99 44.4
Nitab4.5_0000334g0240 Nicotiana tabacum HOM05D006591 ORTHO05D007861 7.1e-11 72.0 101 43.6
Ah.02g126600 Amaranthus hybridus HOM05D006591 ORTHO05D007861 9.3e-11 71.6 116 41.4
Sed0000747 Sechium edule HOM05D006591 ORTHO05D007861 1.2e-10 71.2 48 72.9
SEGI_35394 Sequoiadendron giganteum HOM05D006591 ORTHO05D007861 3.5e-10 69.7 72 51.4
Zm00001eb214530 Zea mays HOM05D006591 ORTHO05D007861 3.5e-10 69.7 118 54.2
HPP92_018457 Vanilla planifolia HOM05D006591 ORTHO05D007861 5.1e-09 65.9 69 44.9
ATR0111G005 Amborella trichopoda HOM05D006591 ORTHO05D007861 6.6e-09 65.5 87 42.5
EL10Ac6g14960 Beta vulgaris HOM05D006591 ORTHO05D007861 8.7e-09 65.1 98 37.8
Pp3c6_21850 Physcomitrium patens HOM05D006591 ORTHO05D007861 1.5e-08 64.3 97 38.1
CSS0029980 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 2.5e-08 63.5 111 41.4
CBR_g23768 Chara braunii HOM05D006591 ORTHO05D007861 3.6e-07 59.7 75 44.0
EL10Ac6g14961 Beta vulgaris HOM05D027931 ORTHO05D007861 1.1e-06 58.2 98 32.7
EL10Ac6g14964 Beta vulgaris HOM05D027931 ORTHO05D007861 5.3e-06 55.8 66 43.9


User provided reference genes

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