Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p18830 Brassica napus HOM05D001356 ORTHO05D005768 2.5e-51 205.3 113 100.0
A09p23850 Brassica napus HOM05D001356 ORTHO05D005768 2.5e-51 205.3 113 100.0
BraA06t25034Z Brassica rapa HOM05D001356 ORTHO05D005768 2.5e-51 205.3 113 100.0
BcaC05g27296 Brassica carinata HOM05D001356 ORTHO05D005768 1.7e-44 182.6 116 89.7
BolC5t34563H Brassica oleracea HOM05D001356 ORTHO05D005768 9.4e-43 176.8 130 81.5
C04p56540 Brassica napus HOM05D001356 ORTHO05D005768 1.2e-40 169.9 130 77.7
BolC4t27180H Brassica oleracea HOM05D001356 ORTHO05D005768 4.4e-40 167.9 130 76.2
BcaC03g14631 Brassica carinata HOM05D001356 ORTHO05D005768 1.4e-38 162.9 131 75.6
C02p20640 Brassica napus HOM05D001356 ORTHO05D005768 1.4e-38 162.9 131 75.6
BolC2t08206H Brassica oleracea HOM05D001356 ORTHO05D005768 7.0e-38 160.6 131 74.8
A02p12580 Brassica napus HOM05D001356 ORTHO05D005768 9.1e-38 160.2 131 74.8
Sp6g13030 Schrenkiella parvula HOM05D001356 ORTHO05D005768 3.5e-37 158.3 140 70.7
BraA02t06316Z Brassica rapa HOM05D001356 ORTHO05D005768 1.7e-36 156.0 131 72.5
Aa31LG3G7400 Aethionema arabicum HOM05D001356 ORTHO05D005768 1.1e-35 153.3 140 69.3
Thhalv10013161m.g Eutrema salsugineum HOM05D001356 ORTHO05D005768 1.5e-35 152.9 141 67.4
Manes.06G124800 Manihot esculenta HOM05D001356 ORTHO05D005768 1.2e-32 143.3 138 61.6
Atru.chr6.1892 Acer truncatum HOM05D001356 ORTHO05D005768 4.1e-30 134.8 138 60.1
THA.LOC104808043 Tarenaya hassleriana HOM05D001356 ORTHO05D005768 7.8e-29 130.6 141 59.6
Carub.0008s1090 Capsella rubella HOM05D001356 ORTHO05D005768 1.3e-28 129.8 127 65.4
CARHR257360 Cardamine hirsuta HOM05D001356 ORTHO05D005768 1.7e-28 129.4 122 66.4
Actinidia36833 Actinidia chinensis HOM05D001356 ORTHO05D005768 2.9e-28 128.6 134 61.2
A03p16520 Brassica napus HOM05D001356 ORTHO05D005768 5.0e-28 127.9 142 60.6
BraA03t10939Z Brassica rapa HOM05D001356 ORTHO05D005768 5.0e-28 127.9 142 60.6
Actinidia08896 Actinidia chinensis HOM05D001356 ORTHO05D005768 6.6e-28 127.5 135 60.0
Cpa.g.sc4.117 Carica papaya HOM05D001356 ORTHO05D005768 6.6e-28 127.5 137 56.2
Ciclev10031112m.g Citrus clementina HOM05D001356 ORTHO05D005768 6.6e-28 127.5 148 54.1
CiPaw.12G001800 Carya illinoinensis HOM05D001356 ORTHO05D005768 1.5e-27 126.3 140 57.9
TWI39G1035 Tripterygium wilfordii HOM05D001356 ORTHO05D005768 7.3e-27 124.0 137 54.7
Dinv11215 Davidia involucrata HOM05D001356 ORTHO05D005768 9.5e-27 123.6 138 56.5
Dinv23197 Davidia involucrata HOM05D001356 ORTHO05D005768 1.2e-26 123.2 137 57.7
C03p19450 Brassica napus HOM05D001356 ORTHO05D005768 1.6e-26 122.9 143 58.0
TAR371G0001 Trochodendron aralioides HOM05D001356 ORTHO05D005768 1.6e-26 122.9 139 52.5
BcaB05g24024 Brassica carinata HOM05D001356 ORTHO05D005768 2.1e-26 122.5 100 74.0
PGR044G0706 Punica granatum HOM05D001356 ORTHO05D005768 3.6e-26 121.7 147 53.7
VMungo1309G3027 Vigna mungo HOM05D001356 ORTHO05D005768 6.1e-26 120.9 136 56.6
Phvul.009G163700 Phaseolus vulgaris HOM05D001356 ORTHO05D005768 1.0e-25 120.2 137 55.5
Glyma.06G166000 Glycine max HOM05D001356 ORTHO05D005768 1.4e-25 119.8 137 54.7
Lsat_1_v5_gn_4_84081 Lactuca sativa HOM05D001356 ORTHO05D005768 1.4e-25 119.8 140 54.3
Lj1g0001437 Lotus japonicus HOM05D001356 ORTHO05D005768 1.4e-25 119.8 134 52.2
PSO478G2570 Papaver somniferum HOM05D001356 ORTHO05D005768 1.8e-25 119.4 135 52.6
PSO017G0138 Papaver somniferum HOM05D001356 ORTHO05D005768 4.0e-25 118.2 135 52.6
Rhsim12G0178700 Rhododendron simsii HOM05D001356 ORTHO05D005768 1.2e-24 116.7 137 56.2
CSS0007451 Camellia sinensis var. sinensis HOM05D001356 ORTHO05D005768 1.5e-24 116.3 139 55.4
HanXRQChr09g0273601 Helianthus annuus HOM05D001356 ORTHO05D005768 1.5e-24 116.3 144 51.4
Lj5C91T4 Lonicera japonica HOM05D001356 ORTHO05D005768 2.0e-24 115.9 139 56.1
Sabra12G0076800 Salix brachista HOM05D001356 ORTHO05D005768 2.0e-24 115.9 138 52.9
Lj9A484T65 Lonicera japonica HOM05D001356 ORTHO05D005768 4.4e-24 114.8 134 55.2
Potri.012G104400 Populus trichocarpa HOM05D001356 ORTHO05D005768 4.4e-24 114.8 139 54.0
AUR62029532 Chenopodium quinoa HOM05D001356 ORTHO05D005768 1.7e-23 112.8 98 64.3
Ca_16078_v3 Cicer arietinum L. HOM05D001356 ORTHO05D005768 1.7e-23 112.8 131 57.3
Medtr3g098730 Medicago truncatula HOM05D001356 ORTHO05D005768 2.9e-23 112.1 133 54.9
Psat5g053840 Pisum sativum HOM05D001356 ORTHO05D005768 2.9e-23 112.1 133 54.9
AT5G50900 Arabidopsis thaliana HOM05D001356 ORTHO05D005768 3.7e-23 111.7 116 63.8
MSTRG.4626 Avicennia marina HOM05D001356 ORTHO05D005768 3.7e-23 111.7 142 52.8
AUR62034787 Chenopodium quinoa HOM05D001356 ORTHO05D005768 3.7e-23 111.7 98 64.3
Solyc03g097740.1 Solanum lycopersicum HOM05D001356 ORTHO05D005768 6.4e-23 110.9 137 51.8
Sopen03g028480 Solanum pennellii HOM05D001356 ORTHO05D005768 6.4e-23 110.9 137 51.8
BcaC01g06057 Brassica carinata HOM05D001356 ORTHO05D005768 8.3e-23 110.5 100 70.0
BolC3t14326H Brassica oleracea HOM05D001356 ORTHO05D005768 8.3e-23 110.5 100 70.0
Duzib084G0402 Durio zibethinus HOM05D001356 ORTHO05D005768 8.3e-23 110.5 121 55.4
PGSC0003DMG400012021 Solanum tuberosum HOM05D001356 ORTHO05D005768 8.3e-23 110.5 137 52.6
AL8G25090 Arabidopsis lyrata HOM05D001356 ORTHO05D005768 1.1e-22 110.2 116 62.9
Glyma.04G199500 Glycine max HOM05D001356 ORTHO05D005768 1.1e-22 110.2 99 65.7
CAN.G637.60 Capsicum annuum HOM05D001356 ORTHO05D005768 1.4e-22 109.8 138 50.7
Sabra15G0123200 Salix brachista HOM05D001356 ORTHO05D005768 1.4e-22 109.8 139 52.5
Lalb_Chr11g0069311 Lupinus albus HOM05D001356 ORTHO05D005768 2.4e-22 109.0 140 50.0
Lalb_Chr23g0272951 Lupinus albus HOM05D001356 ORTHO05D005768 2.4e-22 109.0 140 50.0
DCAR_016359 Daucus carota HOM05D001356 ORTHO05D005768 5.4e-22 107.8 137 51.1
COL.COLO4_16683 Corchorus olitorius HOM05D001356 ORTHO05D005768 7.0e-22 107.5 114 56.1
ECA232G2864 Erigeron canadensis HOM05D001356 ORTHO05D005768 7.0e-22 107.5 100 62.0
QL10p001085 Quercus lobata HOM05D001356 ORTHO05D005768 7.0e-22 107.5 119 53.8
Nitab4.5_0001451g0010 Nicotiana tabacum HOM05D001356 ORTHO05D005768 1.2e-21 106.7 137 51.1
Sed0000393 Sechium edule HOM05D001356 ORTHO05D005768 1.2e-21 106.7 137 51.1
Nitab4.5_0001825g0010 Nicotiana tabacum HOM05D001356 ORTHO05D005768 1.6e-21 106.3 137 51.8
Lsat_1_v5_gn_1_32360 Lactuca sativa HOM05D001356 ORTHO05D005768 2.0e-21 105.9 137 51.1
Cc04_g09470 Coffea canephora HOM05D001356 ORTHO05D005768 3.5e-21 105.1 100 64.0
Potri.015G103700 Populus trichocarpa HOM05D001356 ORTHO05D005768 3.5e-21 105.1 139 50.4
Sed0003645 Sechium edule HOM05D001356 ORTHO05D005768 3.5e-21 105.1 137 48.9
Migut.O00351 Erythranthe guttata HOM05D001356 ORTHO05D005768 4.6e-21 104.8 142 47.9
Manes.14G046700 Manihot esculenta HOM05D001356 ORTHO05D005768 4.6e-21 104.8 115 55.7
SGA_v2.0_scaffold40G15596 Striga asiatica HOM05D001356 ORTHO05D005768 4.6e-21 104.8 142 50.0
MSTRG.11257 Avicennia marina HOM05D001356 ORTHO05D005768 5.9e-21 104.4 142 48.6
Cfa018730 Carpinus fangiana HOM05D001356 ORTHO05D005768 5.9e-21 104.4 124 53.2
HanXRQChr02g0059861 Helianthus annuus HOM05D001356 ORTHO05D005768 7.8e-21 104.0 143 47.6
TAR629G3251 Trochodendron aralioides HOM05D001356 ORTHO05D005768 7.8e-21 104.0 124 49.2
Oeu019019.1 Olea europaea HOM05D001356 ORTHO05D005768 1.3e-20 103.2 146 47.3
Thecc.03G137400 Theobroma cacao HOM05D001356 ORTHO05D005768 2.3e-20 102.4 112 55.4
Haze_07122 Corylus avellana HOM05D001356 ORTHO05D005768 5.0e-20 101.3 131 50.4
Gohir.D09G248500 Gossypium hirsutum HOM05D001356 ORTHO05D005768 5.0e-20 101.3 111 55.0
Gorai.006G272800 Gossypium raimondii HOM05D001356 ORTHO05D005768 5.0e-20 101.3 111 55.0
MBI11_g14284_MAGBIO Magnolia biondii HOM05D001356 ORTHO05D005768 5.0e-20 101.3 124 50.8
Sc04g0000320 Simmondsia chinensis HOM05D001356 ORTHO05D005768 6.6e-20 100.9 122 52.5
ATR0582G114 Amborella trichopoda HOM05D001356 ORTHO05D005768 8.6e-20 100.5 138 48.6
Duzib205G0014 Durio zibethinus HOM05D001356 ORTHO05D005768 8.6e-20 100.5 113 54.0
Gohir.A09G247700 Gossypium hirsutum HOM05D001356 ORTHO05D005768 8.6e-20 100.5 110 55.5
Hma1.2p1_0168F.1_g074170 Hydrangea macrophylla HOM05D001356 ORTHO05D005768 1.1e-19 100.1 100 61.0
Aqoxy3G01748 Aquilegia oxysepala HOM05D001356 ORTHO05D005768 1.5e-19 99.8 143 44.1
Eucgr.K02202 Eucalyptus grandis HOM05D001356 ORTHO05D005768 1.9e-19 99.4 128 51.6
Gohir.A07G047900 Gossypium hirsutum HOM05D001356 ORTHO05D005768 2.5e-19 99.0 114 53.5
Ah.11g041900 Amaranthus hybridus HOM05D001356 ORTHO05D005768 4.3e-19 98.2 140 47.1
TWI23G0437 Tripterygium wilfordii HOM05D001356 ORTHO05D005768 5.6e-19 97.8 112 53.6
SalBow5G4223 Salvia bowleyana HOM05D001356 ORTHO05D005768 9.5e-19 97.1 141 46.8
unitig_27.g25085 Utricularia gibba HOM05D001356 ORTHO05D005768 9.5e-19 97.1 141 48.2
Ah.11g046540 Amaranthus hybridus HOM05D001356 ORTHO05D005768 2.1e-18 95.9 139 46.0
Gorai.001G055200 Gossypium raimondii HOM05D001356 ORTHO05D005768 2.1e-18 95.9 112 53.6
unitig_744.g24640 Utricularia gibba HOM05D001356 ORTHO05D005768 3.6e-18 95.1 141 47.5
CDE05G2390 Ceratophyllum demersum HOM05D001356 ORTHO05D005768 6.2e-18 94.4 121 50.4
Gohir.D07G052200 Gossypium hirsutum HOM05D001356 ORTHO05D005768 6.2e-18 94.4 112 53.6
Nn3g16332 Nelumbo nucifera HOM05D001356 ORTHO05D005768 5.2e-17 91.3 118 48.3
FAN04G0867 Fragaria x ananassa HOM05D001356 ORTHO05D005768 1.2e-16 90.1 121 46.3
CDE05G1548 Ceratophyllum demersum HOM05D001356 ORTHO05D005768 2.0e-16 89.4 113 51.3
SHI14133 Sapria himalayana HOM05D001356 ORTHO05D005768 2.6e-16 89.0 136 44.1
MELO3C021709.2 Cucumis melo HOM05D001356 ORTHO05D005768 4.4e-16 88.2 128 46.9
CsaV3_1G045910 Cucumis sativus L. HOM05D001356 ORTHO05D005768 4.4e-16 88.2 128 46.9
ClCG01G009870 Citrullus lanatus HOM05D001356 ORTHO05D005768 9.8e-16 87.0 127 47.2
Prupe.5G144800 Prunus persica HOM05D001356 ORTHO05D005768 3.7e-15 85.1 114 50.9
A08p28180 Brassica napus HOM05D001356 ORTHO05D005768 4.9e-15 84.7 45 97.8
MD14G1150000 Malus domestica HOM05D001356 ORTHO05D005768 6.4e-15 84.3 113 49.6
Oeu058113.1 Olea europaea HOM05D001356 ORTHO05D005768 2.4e-14 82.4 122 43.4
MD06G1133700 Malus domestica HOM05D001356 ORTHO05D005768 3.2e-14 82.0 114 46.5
EL10Ac5g11336 Beta vulgaris HOM05D001356 ORTHO05D005768 4.1e-14 81.6 114 44.7
Peaxi162Scf00171g00113 Petunia axillaris HOM05D001356 ORTHO05D005768 1.2e-13 80.1 115 46.1
FAN08G3029 Fragaria x ananassa HOM05D001356 ORTHO05D005768 3.5e-13 78.6 111 43.2
Ah.02g114680 Amaranthus hybridus HOM05D001356 ORTHO05D005768 6.0e-13 77.8 73 61.6
Nn2g10462 Nelumbo nucifera HOM05D001356 ORTHO05D005768 6.0e-13 77.8 75 64.0
FvH4_5g09100 Fragaria vesca HOM05D001356 ORTHO05D005768 1.0e-12 77.0 110 43.6
FAN13G1444 Fragaria x ananassa HOM05D001356 ORTHO05D005768 1.0e-12 77.0 110 43.6
FAN18G4028 Fragaria x ananassa HOM05D001356 ORTHO05D005768 1.0e-12 77.0 110 43.6
GSVIVG01008619001 Vitis vinifera HOM05D001356 ORTHO05D005768 1.0e-12 77.0 129 42.6
RcHm_v2.0_Chr7g0189111 Rosa chinensis HOM05D001356 ORTHO05D005768 1.3e-12 76.6 111 44.1
Cfa001848 Carpinus fangiana HOM05D001356 ORTHO05D005768 3.0e-12 75.5 120 42.5
SalBow5G4207 Salvia bowleyana HOM05D001356 ORTHO05D005768 3.3e-11 72.0 72 59.7
HPP92_020101 Vanilla planifolia HOM05D001356 ORTHO05D005768 3.6e-10 68.6 136 37.5
TPR.G21579 Trifolium pratense HOM05D001356 ORTHO05D005768 4.7e-10 68.2 116 49.1
ECA247G0908 Erigeron canadensis HOM05D001356 ORTHO05D005768 5.2e-09 64.7 77 51.9
SEGI_14099 Sequoiadendron giganteum HOM05D001356 ORTHO05D003895 1.2e-08 63.5 122 33.6
CAN.G170.48 Capsicum annuum HOM05D001356 ORTHO05D003895 2.9e-07 58.9 136 35.3
Cpa.g.sc18.193 Carica papaya HOM05D001356 ORTHO05D003895 6.4e-07 57.8 94 40.4
SMO347G0609 Selaginella moellendorffii HOM05D001356 ORTHO05D003895 8.3e-07 57.4 96 37.5
PGSC0003DMG400002873 Solanum tuberosum HOM05D001356 ORTHO05D005768 1.1e-06 57.0 73 50.7
Actinidia38291 Actinidia chinensis HOM05D001356 ORTHO05D003895 2.4e-06 55.8 94 39.4
SEGI_04334 Sequoiadendron giganteum HOM05D001356 ORTHO05D008843 5.4e-06 54.7 136 33.1
Medtr8g032570 Medicago truncatula HOM05D001356 ORTHO05D003895 9.2e-06 53.9 95 40.0
Potri.011G042300 Populus trichocarpa HOM05D003710 ORTHO05D005250 9.2e-06 53.9 95 42.1
Sabra11G0029000 Salix brachista HOM05D003710 ORTHO05D005250 9.2e-06 53.9 95 41.1


User provided reference genes

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