Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p21990 Brassica napus HOM05D001014 ORTHO05D027777 5.6e-65 250.8 124 100.0
BolC1t04802H Brassica oleracea HOM05D001014 ORTHO05D027777 7.4e-57 223.8 124 89.5
BolC9t57488H Brassica oleracea HOM05D001014 ORTHO05D027777 2.3e-34 149.1 99 76.8
C09p46240 Brassica napus HOM05D001014 ORTHO05D000896 5.1e-34 147.9 97 77.3
C02p47550 Brassica napus HOM05D001014 ORTHO05D000896 3.2e-28 128.6 94 70.2
BcaC03g16861 Brassica carinata HOM05D001014 ORTHO05D027777 1.0e-26 123.6 77 79.2
C01p39930 Brassica napus HOM05D001014 ORTHO05D000896 1.1e-25 120.2 90 68.9
BolC1t03948H Brassica oleracea HOM05D001014 ORTHO05D000896 2.0e-22 109.4 91 62.6
AL3G31540 Arabidopsis lyrata HOM05D001014 ORTHO05D000896 9.4e-20 100.5 99 58.6
BraA01t03259Z Brassica rapa HOM05D001014 ORTHO05D000896 9.4e-20 100.5 88 60.2
A01p31340 Brassica napus HOM05D001014 ORTHO05D000896 2.7e-19 99.0 88 59.1
Thhalv10021480m.g Eutrema salsugineum HOM05D001014 ORTHO05D000896 6.8e-18 94.4 97 57.7
A01p36000 Brassica napus HOM05D001014 ORTHO05D000896 8.8e-18 94.0 89 59.6
BraA01t03681Z Brassica rapa HOM05D001014 ORTHO05D000896 1.2e-17 93.6 89 59.6
Sp3g16430 Schrenkiella parvula HOM05D001014 ORTHO05D000896 3.4e-17 92.0 105 56.2
AT3G18295 Arabidopsis thaliana HOM05D001014 ORTHO05D000896 9.8e-17 90.5 105 54.3
CARHR093660 Cardamine hirsuta HOM05D001014 ORTHO05D000896 1.7e-16 89.7 94 56.4
Aa31LG8G5160 Aethionema arabicum HOM05D001014 ORTHO05D000896 1.8e-15 86.3 96 55.2
BcaC09g48791 Brassica carinata HOM05D001014 ORTHO05D000896 2.4e-15 85.9 107 51.4
BcaC09g48792 Brassica carinata HOM05D001014 ORTHO05D000896 2.4e-15 85.9 107 51.4
C01p45870 Brassica napus HOM05D001014 ORTHO05D000896 2.4e-15 85.9 107 51.4
BraA05t21973Z Brassica rapa HOM05D001014 ORTHO05D000896 2.4e-15 85.9 95 55.8
BcaB04g20776 Brassica carinata HOM05D001014 ORTHO05D000896 3.1e-15 85.5 73 65.8
A05p31350 Brassica napus HOM05D001014 ORTHO05D000896 7.7e-14 80.9 99 52.5
Carub.0003s1808 Capsella rubella HOM05D001014 ORTHO05D000896 3.8e-13 78.6 110 49.1
C05p47650 Brassica napus HOM05D001014 ORTHO05D000896 6.5e-13 77.8 95 52.6
Carub.0001s3792 Capsella rubella HOM05D001014 ORTHO05D000896 6.5e-13 77.8 90 52.2
BolC5t33473H Brassica oleracea HOM05D001683 ORTHO05D001627 1.1e-12 77.0 102 50.0
AL1G55490 Arabidopsis lyrata HOM05D001014 ORTHO05D000896 7.2e-12 74.3 94 51.1
AT1G48770 Arabidopsis thaliana HOM05D001014 ORTHO05D000896 1.6e-11 73.2 122 36.9
BolC3t17238H Brassica oleracea HOM05D001683 ORTHO05D001627 1.6e-11 73.2 97 47.4
CARHR038740 Cardamine hirsuta HOM05D001014 ORTHO05D000896 3.6e-11 72.0 90 52.2
THA.LOC104820388 Tarenaya hassleriana HOM05D001014 ORTHO05D000896 3.6e-11 72.0 98 49.0
Aa31LG10G4790 Aethionema arabicum HOM05D001683 ORTHO05D001627 8.0e-11 70.9 91 50.5
BcaC01g03702 Brassica carinata HOM05D001683 ORTHO05D001627 8.0e-11 70.9 98 48.0
C03p49410 Brassica napus HOM05D001683 ORTHO05D001627 8.0e-11 70.9 98 48.0
BolC6t35478H Brassica oleracea HOM05D001683 ORTHO05D001627 5.2e-10 68.2 85 50.6
BraA06t23626Z Brassica rapa HOM05D001014 ORTHO05D000896 5.2e-10 68.2 85 52.9
BcaB07g33719 Brassica carinata HOM05D001014 ORTHO05D000896 1.2e-09 67.0 85 51.8
BcaC08g43078 Brassica carinata HOM05D001014 ORTHO05D000896 1.2e-09 67.0 85 49.4
C06p03370 Brassica napus HOM05D001014 ORTHO05D000896 1.2e-09 67.0 85 49.4
Sp1g35690 Schrenkiella parvula HOM05D001014 ORTHO05D000896 1.5e-09 66.6 88 48.9
C08p04740 Brassica napus HOM05D001014 ORTHO05D000896 2.0e-09 66.2 85 45.9
BolC8t47274H Brassica oleracea HOM05D001014 ORTHO05D000896 2.0e-09 66.2 85 45.9
A03p40610 Brassica napus HOM05D001683 ORTHO05D001627 2.6e-09 65.9 93 46.2
A06p04210 Brassica napus HOM05D001014 ORTHO05D000896 2.6e-09 65.9 85 51.8
BraA03t13218Z Brassica rapa HOM05D001014 ORTHO05D000896 2.6e-09 65.9 93 46.2
Cpa.g.sc3.489 Carica papaya HOM05D001014 ORTHO05D000896 1.8e-07 59.7 98 41.8
BcaC07g37104 Brassica carinata HOM05D001014 ORTHO05D000896 7.0e-07 57.8 85 41.2


User provided reference genes

Program Settings