Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p20380 Brassica napus HOM05D004706 ORTHO05D005277 7.9e-17 89.4 45 100.0
A08p04260 Brassica napus HOM05D004706 ORTHO05D005277 2.5e-15 84.3 45 95.6
BraA06t25150Z Brassica rapa HOM05D004706 ORTHO05D005277 2.5e-15 84.3 45 95.6
BolC2t07849H Brassica oleracea HOM05D004706 ORTHO05D005277 3.3e-15 84.0 45 95.6
A09p45890 Brassica napus HOM05D004706 ORTHO05D005277 4.3e-15 83.6 45 93.3
BolC1t02388H Brassica oleracea HOM05D004706 ORTHO05D005277 4.3e-15 83.6 45 93.3
BolC4t22952H Brassica oleracea HOM05D004706 ORTHO05D005277 4.3e-15 83.6 45 93.3
A01p18690 Brassica napus HOM05D004706 ORTHO05D005277 5.7e-15 83.2 43 97.7
A02p23530 Brassica napus HOM05D004706 ORTHO05D005277 5.7e-15 83.2 43 97.7
A05p26710 Brassica napus HOM05D004706 ORTHO05D005277 5.7e-15 83.2 43 97.7
A09p25710 Brassica napus HOM05D004706 ORTHO05D005277 5.7e-15 83.2 43 97.7
A09p28310 Brassica napus HOM05D004706 ORTHO05D005277 5.7e-15 83.2 43 97.7
C03p47010 Brassica napus HOM05D004706 ORTHO05D005277 5.7e-15 83.2 43 97.7
C07p08740 Brassica napus HOM05D004706 ORTHO05D005277 5.7e-15 83.2 43 97.7
C09p31900 Brassica napus HOM05D004706 ORTHO05D005277 5.7e-15 83.2 43 97.7
C09p42530 Brassica napus HOM05D004706 ORTHO05D005277 5.7e-15 83.2 43 97.7
C09p48740 Brassica napus HOM05D004706 ORTHO05D005277 5.7e-15 83.2 43 97.7
BolC3t19300H Brassica oleracea HOM05D004706 ORTHO05D005277 5.7e-15 83.2 43 97.7
BraA02t07346Z Brassica rapa HOM05D004706 ORTHO05D005277 5.7e-15 83.2 43 97.7
BraA09t38400Z Brassica rapa HOM05D004706 ORTHO05D005277 5.7e-15 83.2 43 97.7
A03p48940 Brassica napus HOM05D004706 ORTHO05D005277 7.4e-15 82.8 43 95.3
A08p08370 Brassica napus HOM05D004706 ORTHO05D005277 7.4e-15 82.8 43 97.7
C09p57610 Brassica napus HOM05D004706 ORTHO05D005277 9.6e-15 82.4 45 91.1
A01p26380 Brassica napus HOM05D004706 ORTHO05D005277 1.3e-14 82.0 43 95.3
A03p56170 Brassica napus HOM05D004706 ORTHO05D005277 1.3e-14 82.0 43 95.3
A07p14770 Brassica napus HOM05D004706 ORTHO05D005277 1.3e-14 82.0 43 95.3
A09p23500 Brassica napus HOM05D004706 ORTHO05D005277 1.3e-14 82.0 43 95.3
BNapus_Darmor_BZH_scaffold_273p00100 Brassica napus HOM05D004706 ORTHO05D005277 1.3e-14 82.0 43 95.3
C03p44520 Brassica napus HOM05D004706 ORTHO05D005277 1.3e-14 82.0 43 95.3
C05p50630 Brassica napus HOM05D004706 ORTHO05D005277 1.3e-14 82.0 45 91.1
BolC3t19299H Brassica oleracea HOM05D004706 ORTHO05D005277 1.3e-14 82.0 45 91.1
BraA08t32880Z Brassica rapa HOM05D004706 ORTHO05D005277 1.3e-14 82.0 43 95.3
A04p05250 Brassica napus HOM05D004706 ORTHO05D005277 1.6e-14 81.6 43 95.3
A05p25430 Brassica napus HOM05D004706 ORTHO05D005277 1.6e-14 81.6 45 91.1
BolC2t07871H Brassica oleracea HOM05D004706 ORTHO05D005277 1.6e-14 81.6 43 95.3
A05p15450 Brassica napus HOM05D004706 ORTHO05D005277 2.1e-14 81.3 43 95.3
A08p07510 Brassica napus HOM05D004706 ORTHO05D005277 2.1e-14 81.3 43 93.0
A09p39700 Brassica napus HOM05D004706 ORTHO05D005277 2.1e-14 81.3 43 95.3
A10p07770 Brassica napus HOM05D004706 ORTHO05D005277 2.1e-14 81.3 45 91.1
C02p34540 Brassica napus HOM05D004706 ORTHO05D005277 2.1e-14 81.3 43 95.3
C08p25060 Brassica napus HOM05D004706 ORTHO05D005277 2.1e-14 81.3 45 91.1
BolC2t07886H Brassica oleracea HOM05D004706 ORTHO05D005277 2.1e-14 81.3 45 91.1
BolC2t11270H Brassica oleracea HOM05D004706 ORTHO05D005277 2.1e-14 81.3 43 95.3
BolC3t18558H Brassica oleracea HOM05D004706 ORTHO05D005277 2.1e-14 81.3 45 91.1
BolC4t22751H Brassica oleracea HOM05D004706 ORTHO05D005277 2.1e-14 81.3 45 93.3
A06p21150 Brassica napus HOM05D004706 ORTHO05D005277 2.8e-14 80.9 43 95.3
A09p28430 Brassica napus HOM05D004706 ORTHO05D005277 2.8e-14 80.9 45 91.1
A09p33830 Brassica napus HOM05D004706 ORTHO05D005277 2.8e-14 80.9 43 95.3
C02p26780 Brassica napus HOM05D004706 ORTHO05D005277 2.8e-14 80.9 45 91.1
BolC1t04985H Brassica oleracea HOM05D004706 ORTHO05D005277 2.8e-14 80.9 43 93.0
BolC3t15937H Brassica oleracea HOM05D004706 ORTHO05D005277 2.8e-14 80.9 43 93.0
BolC4t27415H Brassica oleracea HOM05D004706 ORTHO05D005277 2.8e-14 80.9 45 91.1
BolC7t44651H Brassica oleracea HOM05D004706 ORTHO05D005277 2.8e-14 80.9 43 93.0
BolC9t53199H Brassica oleracea HOM05D004706 ORTHO05D005277 2.8e-14 80.9 45 88.9
A01p28830 Brassica napus HOM05D004706 ORTHO05D005277 3.7e-14 80.5 45 91.1
A03p54960 Brassica napus HOM05D004706 ORTHO05D005277 3.7e-14 80.5 45 91.1
A03p61860 Brassica napus HOM05D004706 ORTHO05D005277 3.7e-14 80.5 43 93.0
A06p18540 Brassica napus HOM05D004706 ORTHO05D005277 3.7e-14 80.5 45 91.1
A09p17100 Brassica napus HOM05D004706 ORTHO05D005277 3.7e-14 80.5 43 93.0
A09p43250 Brassica napus HOM05D004706 ORTHO05D005277 3.7e-14 80.5 43 93.0
C01p40490 Brassica napus HOM05D004706 ORTHO05D005277 3.7e-14 80.5 43 93.0
C03p47020 Brassica napus HOM05D004706 ORTHO05D005277 3.7e-14 80.5 43 93.0
C04p17860 Brassica napus HOM05D004706 ORTHO05D005277 3.7e-14 80.5 45 91.1
C09p31890 Brassica napus HOM05D004706 ORTHO05D005277 3.7e-14 80.5 45 88.9
BraA01t03092Z Brassica rapa HOM05D004706 ORTHO05D005277 3.7e-14 80.5 45 91.1
BraA01t03732Z Brassica rapa HOM05D004706 ORTHO05D005277 3.7e-14 80.5 45 91.1
BraA03t14561Z Brassica rapa HOM05D004706 ORTHO05D005277 3.7e-14 80.5 45 91.1
BraA03t15315Z Brassica rapa HOM05D004706 ORTHO05D005277 3.7e-14 80.5 45 91.1
BraA03t15427Z Brassica rapa HOM05D004706 ORTHO05D005277 3.7e-14 80.5 45 91.1
BraA06t24932Z Brassica rapa HOM05D004706 ORTHO05D005277 3.7e-14 80.5 45 91.1
BraA06t25287Z Brassica rapa HOM05D004706 ORTHO05D005277 3.7e-14 80.5 43 93.0
A01p29510 Brassica napus HOM05D004706 ORTHO05D005277 4.8e-14 80.1 43 95.3
A06p22270 Brassica napus HOM05D004706 ORTHO05D005277 4.8e-14 80.1 43 95.3
C03p81090 Brassica napus HOM05D004706 ORTHO05D005277 4.8e-14 80.1 45 91.1
BraA02t07527Z Brassica rapa HOM05D004706 ORTHO05D005277 4.8e-14 80.1 43 95.3
A07p04630 Brassica napus HOM05D004706 ORTHO05D005277 6.2e-14 79.7 45 91.1
A09p23490 Brassica napus HOM05D004706 ORTHO05D005277 6.2e-14 79.7 45 88.9
BraA09t37950Z Brassica rapa HOM05D004706 ORTHO05D005277 6.2e-14 79.7 45 88.9
A02p24070 Brassica napus HOM05D004706 ORTHO05D005277 8.2e-14 79.3 45 88.9
C04p57970 Brassica napus HOM05D004706 ORTHO05D005277 8.2e-14 79.3 43 93.0
C07p22410 Brassica napus HOM05D004706 ORTHO05D005277 8.2e-14 79.3 43 93.0
BolC3t18570H Brassica oleracea HOM05D004706 ORTHO05D005277 8.2e-14 79.3 43 93.0
A02p21080 Brassica napus HOM05D004706 ORTHO05D005277 1.1e-13 79.0 45 88.9
A03p56160 Brassica napus HOM05D004706 ORTHO05D005277 1.1e-13 79.0 43 90.7
A10p05950 Brassica napus HOM05D004706 ORTHO05D005277 1.1e-13 79.0 45 88.9
C08p25070 Brassica napus HOM05D004706 ORTHO05D005277 1.1e-13 79.0 43 90.7
BraA01t03209Z Brassica rapa HOM05D004706 ORTHO05D005277 1.1e-13 79.0 45 91.1
BraA02t08056Z Brassica rapa HOM05D004706 ORTHO05D005277 1.1e-13 79.0 45 88.9
BraA09t38967Z Brassica rapa HOM05D004706 ORTHO05D005277 1.8e-13 78.2 45 91.1
BraA01t02742Z Brassica rapa HOM05D004706 ORTHO05D005277 2.4e-13 77.8 45 86.7
BraA07t27851Z Brassica rapa HOM05D004706 ORTHO05D005277 2.4e-13 77.8 45 88.9
BraA07t28658Z Brassica rapa HOM05D004706 ORTHO05D005277 2.4e-13 77.8 45 86.7
A03p61290 Brassica napus HOM05D004706 ORTHO05D005277 3.1e-13 77.4 45 88.9
BraA03t15173Z Brassica rapa HOM05D004706 ORTHO05D005277 3.1e-13 77.4 45 88.9
BraA07t28001Z Brassica rapa HOM05D004706 ORTHO05D005277 3.1e-13 77.4 45 86.7
BraA09t37865Z Brassica rapa HOM05D004706 ORTHO05D005277 4.1e-13 77.0 43 88.4
BraA08t32802Z Brassica rapa HOM05D004706 ORTHO05D005277 5.3e-13 76.6 45 86.7
BraA10t42625Z Brassica rapa HOM05D004706 ORTHO05D005277 5.3e-13 76.6 45 88.9
BraA01t02782Z Brassica rapa HOM05D004706 ORTHO05D005277 6.9e-13 76.3 44 86.4
BraA01t02783Z Brassica rapa HOM05D004706 ORTHO05D005277 6.9e-13 76.3 44 86.4
BraA01t02784Z Brassica rapa HOM05D004706 ORTHO05D005277 6.9e-13 76.3 44 86.4
BraA09t38063Z Brassica rapa HOM05D004706 ORTHO05D005277 9.0e-13 75.9 45 86.7
A09p20290 Brassica napus HOM05D004706 ORTHO05D005277 1.2e-12 75.5 43 88.4
BolC6t35590H Brassica oleracea HOM05D004706 ORTHO05D005277 1.5e-12 75.1 41 90.2
BraA06t26035Z Brassica rapa HOM05D004706 ORTHO05D005277 2.0e-12 74.7 41 90.2
BolC1t04986H Brassica oleracea HOM05D004706 ORTHO05D005277 7.6e-12 72.8 41 87.8
C05p53240 Brassica napus HOM05D000096 ORTHO05D005277 1.0e-11 72.4 41 92.7
BraA01t02277Z Brassica rapa HOM05D004706 ORTHO05D005277 4.2e-10 67.0 34 97.1
BraA05t20737Z Brassica rapa HOM05D004706 ORTHO05D005277 4.2e-10 67.0 34 97.1
A03p61870 Brassica napus HOM05D004706 ORTHO05D005277 5.5e-10 66.6 38 89.5
BraA04t16697Z Brassica rapa HOM05D004706 ORTHO05D005277 1.6e-09 65.1 34 94.1
A01p14980 Brassica napus HOM05D004706 ORTHO05D005277 2.7e-09 64.3 34 91.2
A04p10700 Brassica napus HOM05D004706 ORTHO05D005277 2.7e-09 64.3 34 91.2
A05p17020 Brassica napus HOM05D004706 ORTHO05D005277 2.7e-09 64.3 34 91.2
A05p32380 Brassica napus HOM05D004706 ORTHO05D005277 2.7e-09 64.3 34 91.2
A06p21140 Brassica napus HOM05D004706 ORTHO05D005277 2.7e-09 64.3 34 91.2
A06p26730 Brassica napus HOM05D004706 ORTHO05D005277 2.7e-09 64.3 34 91.2
A06p27010 Brassica napus HOM05D004706 ORTHO05D005277 2.7e-09 64.3 34 91.2
A07p05500 Brassica napus HOM05D004706 ORTHO05D005277 2.7e-09 64.3 34 91.2
A09p33260 Brassica napus HOM05D004706 ORTHO05D005277 2.7e-09 64.3 34 91.2
C01p10170 Brassica napus HOM05D004706 ORTHO05D005277 2.7e-09 64.3 34 91.2
C01p24420 Brassica napus HOM05D004706 ORTHO05D005277 2.7e-09 64.3 34 91.2
C02p29580 Brassica napus HOM05D004706 ORTHO05D005277 2.7e-09 64.3 34 91.2
C03p76210 Brassica napus HOM05D004706 ORTHO05D005277 2.7e-09 64.3 34 91.2
C04p59030 Brassica napus HOM05D004706 ORTHO05D005277 2.7e-09 64.3 34 91.2
BraA01t02361Z Brassica rapa HOM05D004706 ORTHO05D005277 2.7e-09 64.3 36 91.7
BraA08t32772Z Brassica rapa HOM05D004706 ORTHO05D005277 2.7e-09 64.3 34 91.2
BraA09t38141Z Brassica rapa HOM05D004706 ORTHO05D005277 2.7e-09 64.3 34 91.2
BraA09t39795Z Brassica rapa HOM05D004706 ORTHO05D005277 2.7e-09 64.3 34 91.2
A04p16730 Brassica napus HOM05D004706 ORTHO05D005277 3.5e-09 63.9 33 90.9
A07p05370 Brassica napus HOM05D004706 ORTHO05D005277 3.5e-09 63.9 32 96.9
A09p21110 Brassica napus HOM05D004706 ORTHO05D005277 3.5e-09 63.9 33 90.9
BolC4t22953H Brassica oleracea HOM05D004706 ORTHO05D005277 3.5e-09 63.9 32 96.9
BolC9t53990H Brassica oleracea HOM05D004706 ORTHO05D005277 3.5e-09 63.9 32 96.9
BraA02t07158Z Brassica rapa HOM05D004706 ORTHO05D005277 3.5e-09 63.9 32 96.9
BraA03t15452Z Brassica rapa HOM05D004706 ORTHO05D005277 3.5e-09 63.9 32 96.9
BraA05t20912Z Brassica rapa HOM05D004706 ORTHO05D005277 3.5e-09 63.9 32 96.9
BraA05t21553Z Brassica rapa HOM05D004706 ORTHO05D005277 3.5e-09 63.9 32 96.9
BraA09t37951Z Brassica rapa HOM05D004706 ORTHO05D005277 3.5e-09 63.9 32 96.9
BraA09t38064Z Brassica rapa HOM05D004706 ORTHO05D005277 3.5e-09 63.9 32 96.9
BraA09t39469Z Brassica rapa HOM05D004706 ORTHO05D005277 4.6e-09 63.5 32 96.9
BolC4t24217H Brassica oleracea HOM05D000096 ORTHO05D000045 7.9e-09 62.8 39 82.1
BraA09t39466Z Brassica rapa HOM05D004706 ORTHO05D005277 7.9e-09 62.8 35 91.4
BraA05t21427Z Brassica rapa HOM05D004706 ORTHO05D005277 1.0e-08 62.4 34 88.2
A04p09030 Brassica napus HOM05D004706 ORTHO05D005277 1.3e-08 62.0 34 91.2
A05p15630 Brassica napus HOM05D004706 ORTHO05D005277 1.3e-08 62.0 34 91.2
A06p17440 Brassica napus HOM05D004706 ORTHO05D005277 1.3e-08 62.0 34 91.2
BraA04t16598Z Brassica rapa HOM05D004706 ORTHO05D005277 1.3e-08 62.0 34 91.2
BraA08t32853Z Brassica rapa HOM05D004706 ORTHO05D005277 1.3e-08 62.0 34 88.2
A07p06250 Brassica napus HOM05D004706 ORTHO05D005277 1.8e-08 61.6 33 90.9
A03p63570 Brassica napus HOM05D004706 ORTHO05D005277 2.3e-08 61.2 34 88.2
BolC2t10804H Brassica oleracea HOM05D000096 ORTHO05D000045 3.0e-08 60.8 35 88.6
BolC8t48490H Brassica oleracea HOM05D000096 ORTHO05D010037 3.0e-08 60.8 35 88.6
A01p30800 Brassica napus HOM05D004706 ORTHO05D005277 6.7e-08 59.7 34 88.2
C04p25910 Brassica napus HOM05D000096 ORTHO05D000045 8.7e-08 59.3 39 76.9
BolC4t24218H Brassica oleracea HOM05D000096 ORTHO05D000045 8.7e-08 59.3 39 76.9
BraA02t08375Z Brassica rapa HOM05D004706 ORTHO05D005277 8.7e-08 59.3 34 85.3
A05p19410 Brassica napus HOM05D004706 ORTHO05D005277 1.1e-07 58.9 34 88.2
A09p34190 Brassica napus HOM05D004706 ORTHO05D005277 1.1e-07 58.9 34 88.2
A10p03490 Brassica napus HOM05D004706 ORTHO05D005277 1.1e-07 58.9 32 90.6
BraA01t03771Z Brassica rapa HOM05D004706 ORTHO05D005277 1.5e-07 58.5 32 87.5
C09p36920 Brassica napus HOM05D000096 ORTHO05D000174 2.5e-07 57.8 39 69.2
BolC9t56522H Brassica oleracea HOM05D000096 ORTHO05D000174 2.5e-07 57.8 39 69.2
C07p00750 Brassica napus HOM05D000096 ORTHO05D000045 5.7e-07 56.6 39 66.7
CARHR038360 Cardamine hirsuta HOM05D000096 ORTHO05D000045 5.7e-07 56.6 39 66.7
CARHR161290 Cardamine hirsuta HOM05D000096 ORTHO05D005277 5.7e-07 56.6 42 61.9
A05p27530 Brassica napus HOM05D000096 ORTHO05D000045 7.4e-07 56.2 39 66.7
BolC2t10350H Brassica oleracea HOM05D000096 ORTHO05D000045 7.4e-07 56.2 39 69.2
BolC4t25353H Brassica oleracea HOM05D000096 ORTHO05D000045 7.4e-07 56.2 39 66.7
CARHR117390 Cardamine hirsuta HOM05D000096 ORTHO05D005277 7.4e-07 56.2 39 74.4
TPR.G15489 Trifolium pratense HOM05D000096 ORTHO05D000045 7.4e-07 56.2 39 71.8
C05p58280 Brassica napus HOM05D000096 ORTHO05D000045 9.7e-07 55.8 35 80.0
CARHR031010 Cardamine hirsuta HOM05D000096 ORTHO05D005277 1.3e-06 55.5 39 64.1
TPR.G14138 Trifolium pratense HOM05D000096 ORTHO05D000045 1.6e-06 55.1 39 69.2
CARHR259120 Cardamine hirsuta HOM05D000096 ORTHO05D000045 2.2e-06 54.7 39 64.1
AT3G51690 Arabidopsis thaliana HOM05D000096 ORTHO05D000045 2.8e-06 54.3 39 61.5
C01p17350 Brassica napus HOM05D000096 ORTHO05D000045 2.8e-06 54.3 39 66.7
C03p86030 Brassica napus HOM05D000096 ORTHO05D000045 2.8e-06 54.3 39 66.7
BolC3t20895H Brassica oleracea HOM05D000096 ORTHO05D000045 2.8e-06 54.3 39 66.7
CARHR161310 Cardamine hirsuta HOM05D000096 ORTHO05D000045 2.8e-06 54.3 39 64.1
Medtr3g100990 Medicago truncatula HOM05D000096 ORTHO05D000045 2.8e-06 54.3 39 66.7
BolC2t08343H Brassica oleracea HOM05D000096 ORTHO05D000045 3.7e-06 53.9 39 64.1
CARHR034850 Cardamine hirsuta HOM05D000096 ORTHO05D000045 4.8e-06 53.5 39 64.1
ECA238G0298 Erigeron canadensis HOM05D000096 ORTHO05D000045 4.8e-06 53.5 39 61.5
CARHR161300 Cardamine hirsuta HOM05D000096 ORTHO05D000045 6.3e-06 53.1 39 64.1
CARHR217880 Cardamine hirsuta HOM05D000096 ORTHO05D000045 8.2e-06 52.8 38 71.1


User provided reference genes

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