Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p20220 Brassica napus HOM05D006087 ORTHO05D007479 9.7e-52 206.5 99 100.0
BraA09t37633Z Brassica rapa HOM05D006087 ORTHO05D007479 1.8e-50 202.2 99 98.0
BcaC04g21941 Brassica carinata HOM05D006087 ORTHO05D007479 2.4e-50 201.8 99 97.0
C09p25630 Brassica napus HOM05D006087 ORTHO05D007479 2.4e-50 201.8 99 97.0
BolC9t55466H Brassica oleracea HOM05D006087 ORTHO05D007479 2.4e-50 201.8 99 97.0
Sp2g08050 Schrenkiella parvula HOM05D006087 ORTHO05D007479 4.1e-50 201.1 99 94.9
BcaB07g31021 Brassica carinata HOM05D006087 ORTHO05D007479 1.6e-49 199.1 99 96.0
A06p47950 Brassica napus HOM05D006087 ORTHO05D007479 5.9e-49 197.2 99 92.9
C07p25860 Brassica napus HOM05D006087 ORTHO05D007479 5.9e-49 197.2 99 92.9
BolC7t43103H Brassica oleracea HOM05D006087 ORTHO05D007479 5.9e-49 197.2 99 92.9
BraA06t27665Z Brassica rapa HOM05D006087 ORTHO05D007479 5.9e-49 197.2 99 92.9
Carub.0008s0544 Capsella rubella HOM05D006087 ORTHO05D007479 5.7e-44 180.6 99 83.8
AL8G17230 Arabidopsis lyrata HOM05D006087 ORTHO05D007479 4.8e-43 177.6 99 84.8
AT5G43260 Arabidopsis thaliana HOM05D006087 ORTHO05D007479 7.0e-42 173.7 99 82.8
Lalb_Chr12g0206161 Lupinus albus HOM05D006087 ORTHO05D007479 1.1e-39 166.4 97 80.4
Aa31LG9G13330 Aethionema arabicum HOM05D006087 ORTHO05D007479 1.5e-39 166.0 99 81.8
THA.LOC104812595 Tarenaya hassleriana HOM05D006087 ORTHO05D007479 3.2e-39 164.9 96 79.2
CARHR180610 Cardamine hirsuta HOM05D006087 ORTHO05D007479 2.8e-38 161.8 99 78.8
EL10Ac6g13503 Beta vulgaris HOM05D006087 ORTHO05D007479 6.1e-38 160.6 102 74.5
Eucgr.B03495 Eucalyptus grandis HOM05D006087 ORTHO05D007479 1.8e-37 159.1 97 77.3
TAR374G1631 Trochodendron aralioides HOM05D006087 ORTHO05D007479 1.8e-37 159.1 97 76.3
Atru.chr11.2326 Acer truncatum HOM05D006087 ORTHO05D007479 2.3e-37 158.7 97 76.3
TWI75G0102 Tripterygium wilfordii HOM05D006087 ORTHO05D007479 2.3e-37 158.7 96 77.1
Ah.03g136140 Amaranthus hybridus HOM05D006087 ORTHO05D007479 4.0e-37 157.9 95 75.8
Phvul.001G262000 Phaseolus vulgaris HOM05D006087 ORTHO05D007479 1.2e-36 156.4 97 75.3
Glyma.18G006400 Glycine max HOM05D006087 ORTHO05D007479 2.6e-36 155.2 97 75.3
MD16G1119600 Malus domestica HOM05D006087 ORTHO05D007479 2.6e-36 155.2 96 72.9
Glyma.11G250700 Glycine max HOM05D006087 ORTHO05D007479 3.4e-36 154.8 97 75.3
Manes.12G011100 Manihot esculenta HOM05D006087 ORTHO05D007479 3.4e-36 154.8 97 76.3
Ciclev10033174m.g Citrus clementina HOM05D006087 ORTHO05D007479 4.4e-36 154.5 97 74.2
MD13G1119200 Malus domestica HOM05D006087 ORTHO05D007479 4.4e-36 154.5 96 76.0
Gohir.D12G152800 Gossypium hirsutum HOM05D006087 ORTHO05D007479 7.5e-36 153.7 95 75.8
Gorai.008G165300 Gossypium raimondii HOM05D006087 ORTHO05D007479 7.5e-36 153.7 95 75.8
PGSC0003DMG400014051 Solanum tuberosum HOM05D006087 ORTHO05D007479 1.3e-35 152.9 97 75.3
CANSAT01G2640 Cannabis sativa HOM05D006087 ORTHO05D007479 1.7e-35 152.5 98 74.5
Thecc.02G208200 Theobroma cacao HOM05D006087 ORTHO05D007479 1.7e-35 152.5 95 76.8
CAN.G163.9 Capsicum annuum HOM05D006087 ORTHO05D007479 2.2e-35 152.1 99 73.7
CiPaw.05G109600 Carya illinoinensis HOM05D006087 ORTHO05D007479 2.2e-35 152.1 97 74.2
TWI18G0911 Tripterygium wilfordii HOM05D006087 ORTHO05D007479 2.2e-35 152.1 96 72.9
Cfa009371 Carpinus fangiana HOM05D006087 ORTHO05D007479 2.8e-35 151.8 97 75.3
Haze_12421 Corylus avellana HOM05D006087 ORTHO05D007479 2.8e-35 151.8 97 75.3
Oeu036868.1 Olea europaea HOM05D006087 ORTHO05D007479 2.8e-35 151.8 97 74.2
Ah.02g130900 Amaranthus hybridus HOM05D006087 ORTHO05D007479 3.7e-35 151.4 94 72.3
COL.COLO4_20404 Corchorus olitorius HOM05D006087 ORTHO05D007479 3.7e-35 151.4 95 75.8
Cc11_g16920 Coffea canephora HOM05D006087 ORTHO05D007479 4.9e-35 151.0 95 73.7
Solyc05g015470.1 Solanum lycopersicum HOM05D006087 ORTHO05D007479 6.3e-35 150.6 97 74.2
Sopen05g010780 Solanum pennellii HOM05D006087 ORTHO05D007479 6.3e-35 150.6 97 74.2
TAR622G0081 Trochodendron aralioides HOM05D006087 ORTHO05D007479 8.3e-35 150.2 94 74.5
Prupe.1G225600 Prunus persica HOM05D006087 ORTHO05D007479 1.1e-34 149.8 96 75.0
QL03p052667 Quercus lobata HOM05D006087 ORTHO05D007479 1.1e-34 149.8 97 73.2
Lj4g0011842 Lotus japonicus HOM05D006087 ORTHO05D007479 1.8e-34 149.1 97 70.1
Potri.001G056601 Populus trichocarpa HOM05D006087 ORTHO05D007479 1.8e-34 149.1 97 74.2
TWI36G1569 Tripterygium wilfordii HOM05D006087 ORTHO05D007479 1.8e-34 149.1 96 71.9
MELO3C011864.2 Cucumis melo HOM05D006087 ORTHO05D007479 2.4e-34 148.7 97 74.2
CiPaw.06G102800 Carya illinoinensis HOM05D006087 ORTHO05D007479 3.1e-34 148.3 97 72.2
SGA_v2.0_scaffold9G04680 Striga asiatica HOM05D006087 ORTHO05D007479 4.1e-34 147.9 100 70.0
Duzib251G0251 Durio zibethinus HOM05D006087 ORTHO05D007479 5.4e-34 147.5 95 73.7
Sc04g0010140 Simmondsia chinensis HOM05D006087 ORTHO05D007479 7.0e-34 147.1 97 71.1
unitig_749.g13305 Utricularia gibba HOM05D006087 ORTHO05D007479 9.2e-34 146.7 98 69.4
PSO017G6027 Papaver somniferum HOM05D006087 ORTHO05D007479 1.6e-33 146.0 97 72.2
PSO478G2574 Papaver somniferum HOM05D006087 ORTHO05D007479 1.6e-33 146.0 97 72.2
Duzib248G0070 Durio zibethinus HOM05D006087 ORTHO05D007479 2.0e-33 145.6 95 71.6
FAN17G2012 Fragaria x ananassa HOM05D006087 ORTHO05D007479 2.0e-33 145.6 96 70.8
Oeu004448.1 Olea europaea HOM05D006087 ORTHO05D007479 2.0e-33 145.6 97 72.2
Gohir.D04G182800 Gossypium hirsutum HOM05D006087 ORTHO05D007479 2.7e-33 145.2 95 72.6
Gorai.012G175800 Gossypium raimondii HOM05D006087 ORTHO05D007479 2.7e-33 145.2 95 72.6
FAN07G1634 Fragaria x ananassa HOM05D006087 ORTHO05D007479 4.5e-33 144.4 96 69.8
FAN22G0702 Fragaria x ananassa HOM05D006087 ORTHO05D007479 4.5e-33 144.4 96 69.8
Medtr3g085300 Medicago truncatula HOM05D006087 ORTHO05D007479 4.5e-33 144.4 97 71.1
CsaV3_5G030260 Cucumis sativus L. HOM05D006087 ORTHO05D007479 5.9e-33 144.1 97 72.2
FAN12G1341 Fragaria x ananassa HOM05D006087 ORTHO05D007479 5.9e-33 144.1 96 69.8
FAN12G1854 Fragaria x ananassa HOM05D006087 ORTHO05D007479 5.9e-33 144.1 96 69.8
Gohir.A12G148826 Gossypium hirsutum HOM05D006087 ORTHO05D007479 7.8e-33 143.7 95 71.6
RcHm_v2.0_Chr4g0430231 Rosa chinensis HOM05D006087 ORTHO05D007479 1.3e-32 142.9 96 69.8
Gohir.A04G139600 Gossypium hirsutum HOM05D006087 ORTHO05D007479 1.7e-32 142.5 95 71.6
TPR.G17782 Trifolium pratense HOM05D006087 ORTHO05D007479 3.8e-32 141.4 97 70.1
Psat5g096360 Pisum sativum HOM05D006087 ORTHO05D007479 1.1e-31 139.8 97 70.1
THA.LOC104820522 Tarenaya hassleriana HOM05D006087 ORTHO05D007479 1.1e-31 139.8 96 70.8
Hma1.2p1_0065F.1_g035460 Hydrangea macrophylla HOM05D006087 ORTHO05D007479 1.5e-31 139.4 98 67.3
CDE02G3899 Ceratophyllum demersum HOM05D006087 ORTHO05D007479 2.5e-31 138.7 99 64.6
Cpa.g.sc43.59 Carica papaya HOM05D006087 ORTHO05D007479 3.3e-31 138.3 96 70.8
Ca_16458_v3 Cicer arietinum L. HOM05D006087 ORTHO05D007479 3.3e-31 138.3 97 68.0
Nitab4.5_0001808g0020 Nicotiana tabacum HOM05D006087 ORTHO05D007479 3.3e-31 138.3 97 70.1
Potri.003G171800 Populus trichocarpa HOM05D006087 ORTHO05D007479 4.3e-31 137.9 97 70.1
Actinidia20712 Actinidia chinensis HOM05D006087 ORTHO05D007479 7.3e-31 137.1 97 67.0
Nitab4.5_0000039g0180 Nicotiana tabacum HOM05D006087 ORTHO05D007479 9.5e-31 136.7 97 69.1
Lsat_1_v5_gn_4_3481 Lactuca sativa HOM05D006087 ORTHO05D007479 1.2e-30 136.3 104 62.5
Duzib268G0474 Durio zibethinus HOM05D006087 ORTHO05D007479 2.8e-30 135.2 95 68.4
Migut.K00735 Erythranthe guttata HOM05D006087 ORTHO05D007479 2.8e-30 135.2 98 68.4
AUR62005621 Chenopodium quinoa HOM05D006087 ORTHO05D007479 4.7e-30 134.4 95 63.2
Aqoxy5G03370 Aquilegia oxysepala HOM05D006087 ORTHO05D007479 2.3e-29 132.1 90 70.0
AUR62028927 Chenopodium quinoa HOM05D006087 ORTHO05D007479 2.3e-29 132.1 95 63.2
ECA234G0111 Erigeron canadensis HOM05D006087 ORTHO05D007479 8.9e-29 130.2 86 69.8
MELO3C010741.2 Cucumis melo HOM05D006087 ORTHO05D007479 2.0e-28 129.0 96 63.5
ATR0561G204 Amborella trichopoda HOM05D006087 ORTHO05D007479 4.4e-28 127.9 92 65.2
HanXRQChr10g0310621 Helianthus annuus HOM05D006087 ORTHO05D007479 4.4e-28 127.9 99 61.6
Lalb_Chr23g0278081 Lupinus albus HOM05D006087 ORTHO05D007479 4.4e-28 127.9 97 66.0
PGR102G3303 Punica granatum HOM05D006087 ORTHO05D007479 7.5e-28 127.1 99 64.6
THA.LOC104825505 Tarenaya hassleriana HOM05D006087 ORTHO05D007479 7.5e-28 127.1 100 62.0
Rhsim12G0025700 Rhododendron simsii HOM05D006087 ORTHO05D007479 4.9e-27 124.4 99 62.6
ECA233G2512 Erigeron canadensis HOM05D006443 ORTHO05D007797 8.3e-27 123.6 85 67.1
Migut.E00016 Erythranthe guttata HOM05D006087 ORTHO05D007479 2.4e-26 122.1 95 60.0
MD05G1114700 Malus domestica HOM05D006087 ORTHO05D007479 5.4e-26 120.9 80 71.2
Sed0007875 Sechium edule HOM05D006087 ORTHO05D007479 2.0e-25 119.0 99 55.6
THA.LOC104807129 Tarenaya hassleriana HOM05D006087 ORTHO05D007479 2.7e-25 118.6 100 58.0
MSTRG.8005 Avicennia marina HOM05D006087 ORTHO05D007479 1.0e-24 116.7 97 59.8
arahy.Tifrunner.gnm1.ann1.1Z01XL Arachis hypogaea HOM05D006087 ORTHO05D007479 1.3e-24 116.3 100 60.0
CSS0016505 Camellia sinensis var. sinensis HOM05D006087 ORTHO05D007479 1.3e-24 116.3 85 67.1
CSS0027394 Camellia sinensis var. sinensis HOM05D006087 ORTHO05D007479 1.3e-24 116.3 85 67.1
MBI11_g44422_MAGBIO Magnolia biondii HOM05D006087 ORTHO05D007479 1.7e-24 115.9 93 62.4
Mapoly0062s0032 Marchantia polymorpha HOM05D006087 ORTHO05D007479 3.9e-24 114.8 89 60.7
ClCG08G017160 Citrullus lanatus HOM05D006087 ORTHO05D007479 1.9e-23 112.5 96 55.2
CsaV3_2G025430 Cucumis sativus L. HOM05D006087 ORTHO05D007479 9.5e-23 110.2 78 66.7
Pp3c22_5660 Physcomitrium patens HOM05D006087 ORTHO05D007479 1.6e-22 109.4 92 57.6
Pp3c18_21810 Physcomitrium patens HOM05D006087 ORTHO05D007479 3.6e-22 108.2 92 59.8
Pp3c21_520 Physcomitrium patens HOM05D006087 ORTHO05D007479 6.2e-22 107.5 93 55.9
MBI11_g05327_MAGBIO Magnolia biondii HOM05D006087 ORTHO05D007479 2.0e-20 102.4 70 70.0
Pp3c14_11460 Physcomitrium patens HOM05D006087 ORTHO05D007479 2.9e-19 98.6 99 50.5
HPP92_024307 Vanilla planifolia HOM05D006087 ORTHO05D007479 2.9e-19 98.6 88 59.1
HPP92_024290 Vanilla planifolia HOM05D006087 ORTHO05D007479 3.7e-19 98.2 87 60.9
Hma1.2p1_0349F.1_g132260 Hydrangea macrophylla HOM05D006087 ORTHO05D007479 1.7e-16 89.4 97 54.6
Pp3c17_7480 Physcomitrium patens HOM05D006087 ORTHO05D007479 2.3e-16 89.0 97 44.3
Zm00001eb241730 Zea mays HOM05D006087 ORTHO05D007479 2.6e-12 75.5 95 41.1
Os02g0506600 Oryza sativa ssp. japonica HOM05D006087 ORTHO05D007479 1.7e-11 72.8 105 39.0
Cre10.g432100 Chlamydomonas reinhardtii HOM05D006087 ORTHO05D007479 3.7e-11 71.6 88 39.8
Zm00001eb180950 Zea mays HOM05D006087 ORTHO05D007479 1.1e-10 70.1 100 39.0
MD16G1189100 Malus domestica HOM05D006087 ORTHO05D007479 3.5e-09 65.1 41 68.3
Zm00001eb421040 Zea mays HOM05D006087 ORTHO05D007479 3.9e-08 61.6 54 50.0
CDE05G3495 Ceratophyllum demersum HOM05D006087 ORTHO05D007479 1.9e-07 59.3 57 57.9


User provided reference genes

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